RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 BCO1Q9HAY6 547 aa16.63■□□□□ 0.25
USP39-202ENST00000409025 TIMM10BQ9Y5J6 103 aa16.63■□□□□ 0.25
USP39-202ENST00000409025 SYNGR3O43761 229 aa16.62■□□□□ 0.25
USP39-202ENST00000409025 FARS2O95363 451 aaKnown RBP16.62■□□□□ 0.25
USP39-202ENST00000409025 ABOP16442 354 aa16.62■□□□□ 0.25
USP39-202ENST00000409025 ZNF32P17041 273 aa16.62■□□□□ 0.25
USP39-202ENST00000409025 ANOS1P23352 680 aa16.62■□□□□ 0.25
USP39-202ENST00000409025 DYRK1AQ13627 763 aa16.62■□□□□ 0.25
USP39-202ENST00000409025 ADGRE4PQ86SQ3 457 aa16.62■□□□□ 0.25
USP39-202ENST00000409025 OR52N4Q8NGI2 321 aa16.62■□□□□ 0.25
USP39-202ENST00000409025 OR1F12Q8NHA8 337 aa16.62■□□□□ 0.25
USP39-202ENST00000409025 GCDHQ92947 438 aaPredicted RBP16.62■□□□□ 0.25
USP39-202ENST00000409025 ATG5Q9H1Y0 275 aa16.62■□□□□ 0.25
USP39-202ENST00000409025 GGT3PA6NGU5 568 aa16.62■□□□□ 0.25
USP39-202ENST00000409025 ECDO95905 644 aaPredicted RBP16.62■□□□□ 0.25
USP39-202ENST00000409025 IGLV3-1P01715 115 aa16.62■□□□□ 0.25
USP39-202ENST00000409025 IGHV3-9P01782 118 aa16.62■□□□□ 0.25
USP39-202ENST00000409025 YES1P07947 543 aa16.62■□□□□ 0.25
USP39-202ENST00000409025 DBHP09172 617 aa16.62■□□□□ 0.25
USP39-202ENST00000409025 CPN1P15169 458 aa16.62■□□□□ 0.25
USP39-202ENST00000409025 TPTEP56180 551 aa16.62■□□□□ 0.25
USP39-202ENST00000409025 KLF9Q13886 244 aaPredicted RBP16.62■□□□□ 0.25
USP39-202ENST00000409025 STK11Q15831 433 aa16.62■□□□□ 0.25
USP39-202ENST00000409025 NRN1LQ496H8 165 aa16.62■□□□□ 0.25
USP39-202ENST00000409025 ZNF774Q6NX45 483 aa16.62■□□□□ 0.25
USP39-202ENST00000409025 OR14K1Q8NGZ2 314 aa16.62■□□□□ 0.25
USP39-202ENST00000409025 WDYHV1Q96HA8 205 aa16.62■□□□□ 0.25
USP39-202ENST00000409025 UQCC2Q9BRT2 126 aa16.62■□□□□ 0.25
USP39-202ENST00000409025 MARVELD1Q9BSK0 173 aa16.62■□□□□ 0.25
USP39-202ENST00000409025 METTL17Q9H7H0 456 aaPredicted RBP16.62■□□□□ 0.25
USP39-202ENST00000409025 SLC7A10Q9NS82 523 aa16.62■□□□□ 0.25
USP39-202ENST00000409025 PROB1E7EW31 1015 aa16.61■□□□□ 0.25
USP39-202ENST00000409025 E9PLN8 166 aa16.61■□□□□ 0.25
USP39-202ENST00000409025 CRYGSP22914 178 aa16.61■□□□□ 0.25
USP39-202ENST00000409025 AP3S2P59780 193 aa16.61■□□□□ 0.25
USP39-202ENST00000409025 PLA1AQ53H76 456 aa16.61■□□□□ 0.25
USP39-202ENST00000409025 DRAM2Q6UX65 266 aa16.61■□□□□ 0.25
USP39-202ENST00000409025 ASCL5Q7RTU5 278 aa16.61■□□□□ 0.25
USP39-202ENST00000409025 CCDC54Q8NEL0 328 aa16.61■□□□□ 0.25
USP39-202ENST00000409025 OR4D6Q8NGJ1 314 aa16.61■□□□□ 0.25
USP39-202ENST00000409025 CREB3L1Q96BA8 519 aa16.61■□□□□ 0.25
USP39-202ENST00000409025 UPRTQ96BW1 309 aa16.61■□□□□ 0.25
USP39-202ENST00000409025 OR10A2Q9H208 303 aa16.61■□□□□ 0.25
USP39-202ENST00000409025 DPAGT1Q9H3H5 408 aa16.61■□□□□ 0.25
USP39-202ENST00000409025 CNTD2Q9H8S5 307 aa16.61■□□□□ 0.25
USP39-202ENST00000409025 SPRR3Q9UBC9 169 aa16.61■□□□□ 0.25
USP39-202ENST00000409025 TRAV17A0A0B4J275 112 aa16.6■□□□□ 0.25
USP39-202ENST00000409025 C5orf63A6NC05 138 aa16.6■□□□□ 0.25
USP39-202ENST00000409025 GSTT2BP0CG30 244 aa16.6■□□□□ 0.25
USP39-202ENST00000409025 GABRA1P14867 456 aa16.6■□□□□ 0.25
USP39-202ENST00000409025 BTCP35070 178 aa16.6■□□□□ 0.25
USP39-202ENST00000409025 PMP22Q01453 160 aa16.6■□□□□ 0.25
USP39-202ENST00000409025 SNTB2Q13425 540 aaKnown RBP16.6■□□□□ 0.25
USP39-202ENST00000409025 SKA3Q8IX90 412 aa16.6■□□□□ 0.25
USP39-202ENST00000409025 OR52H1Q8NGJ2 320 aa16.6■□□□□ 0.25
USP39-202ENST00000409025 PTX4Q96A99 478 aa16.6■□□□□ 0.25
USP39-202ENST00000409025 LYZL4Q96KX0 146 aa16.6■□□□□ 0.25
USP39-202ENST00000409025 OR2H1Q9GZK4 316 aa16.6■□□□□ 0.25
USP39-202ENST00000409025 RBMX2Q9Y388 322 aaKnown RBP16.6■□□□□ 0.25
USP39-202ENST00000409025 RHBDD3Q9Y3P4 386 aa16.6■□□□□ 0.25
USP39-202ENST00000409025 CIB4A0PJX0 185 aa16.6■□□□□ 0.25
USP39-202ENST00000409025 OR6C6A6NF89 314 aa16.6■□□□□ 0.25
USP39-202ENST00000409025 ZNF587BE7ETH6 402 aa16.6■□□□□ 0.25
USP39-202ENST00000409025 RPL36A-HNRNPH2H7BZ11 118 aa16.6■□□□□ 0.25
USP39-202ENST00000409025 LDLRAD4O15165 306 aa16.6■□□□□ 0.25
USP39-202ENST00000409025 PATE4P0C8F1 98 aa16.6■□□□□ 0.25
USP39-202ENST00000409025 PSG4Q00888 419 aa16.6■□□□□ 0.25
USP39-202ENST00000409025 AKR7LQ8NHP1 331 aa16.6■□□□□ 0.25
USP39-202ENST00000409025 APH1AQ96BI3 265 aa16.6■□□□□ 0.25
USP39-202ENST00000409025 TRAV18A0A075B6X5 111 aa16.59■□□□□ 0.25
USP39-202ENST00000409025 INMT-MINDY4F8WBC2 141 aa16.59■□□□□ 0.25
USP39-202ENST00000409025 MTRF1O75570 445 aaKnown RBP16.59■□□□□ 0.25
USP39-202ENST00000409025 DHRS3O75911 302 aa16.59■□□□□ 0.25
USP39-202ENST00000409025 PTHLHP12272 177 aa16.59■□□□□ 0.25
USP39-202ENST00000409025 ZNF24P17028 368 aa16.59■□□□□ 0.25
USP39-202ENST00000409025 ZNF93P35789 620 aaPredicted RBP16.59■□□□□ 0.25
USP39-202ENST00000409025 HTR5AP47898 357 aa16.59■□□□□ 0.25
USP39-202ENST00000409025 ARF1P84077 181 aaKnown RBP16.59■□□□□ 0.25
USP39-202ENST00000409025 TATDN3Q17R31 274 aa16.59■□□□□ 0.25
USP39-202ENST00000409025 BIVMQ86UB2 503 aa16.59■□□□□ 0.25
USP39-202ENST00000409025 CDH26Q8IXH8 852 aa16.59■□□□□ 0.25
USP39-202ENST00000409025 UPB1Q9UBR1 384 aa16.59■□□□□ 0.25
USP39-202ENST00000409025 KLK11Q9UBX7 282 aa16.59■□□□□ 0.25
USP39-202ENST00000409025 V9GYS6 101 aa16.59■□□□□ 0.25
USP39-202ENST00000409025 ZNF407Q9C0G0 2248 aa16.59■□□□□ 0.25
USP39-202ENST00000409025 A0A0B4J293 547 aa16.58■□□□□ 0.25
USP39-202ENST00000409025 HMX3A6NHT5 357 aa16.58■□□□□ 0.25
USP39-202ENST00000409025 CCNKO75909 580 aa16.58■□□□□ 0.25
USP39-202ENST00000409025 KDM4BO94953 1096 aa16.58■□□□□ 0.25
USP39-202ENST00000409025 SLC34A2O95436 690 aa16.58■□□□□ 0.25
USP39-202ENST00000409025 BPNT1O95861 308 aa16.58■□□□□ 0.25
USP39-202ENST00000409025 RAB6AP20340 208 aa16.58■□□□□ 0.25
USP39-202ENST00000409025 THBS4P35443 961 aa16.58■□□□□ 0.25
USP39-202ENST00000409025 EIF2B2P49770 351 aaKnown RBP16.58■□□□□ 0.25
USP39-202ENST00000409025 DNM1P46Q6ZS02 220 aa16.58■□□□□ 0.25
USP39-202ENST00000409025 ZNF100Q8IYN0 542 aa16.58■□□□□ 0.25
USP39-202ENST00000409025 OR5AS1Q8N127 324 aa16.58■□□□□ 0.25
USP39-202ENST00000409025 UBASH3BQ8TF42 649 aa16.58■□□□□ 0.25
USP39-202ENST00000409025 WNT5BQ9H1J7 359 aa16.58■□□□□ 0.25
USP39-202ENST00000409025 COPZ2Q9P299 210 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms