RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 OR2F1Q13607 317 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 TMEM225Q6GV28 225 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 PTCRAQ6ISU1 281 aaPredicted RBP7.93□□□□□ -1.14
RTN4-206ENST00000394611 TFAP2EQ6VUC0 442 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 SLC30A7Q8NEW0 376 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 OR6S1Q8NH40 331 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 OR51E1Q8TCB6 317 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 GLYATL2Q8WU03 294 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 ATG101Q9BSB4 218 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 NICN1Q9BSH3 213 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 SARGQ9BW04 601 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 TOLLIPQ9H0E2 274 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 EXOSC3Q9NQT5 275 aaKnown RBP7.93□□□□□ -1.14
RTN4-206ENST00000394611 DOCK11Q5JSL3 2073 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 SPTAN1Q13813 2472 aaKnown RBP7.93□□□□□ -1.14
RTN4-206ENST00000394611 IGKV1-8A0A0C4DH67 115 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 WNT11O96014 354 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 CTSBP07858 339 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 DPP4P27487 766 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 HOXA1P49639 335 aaPredicted RBP7.93□□□□□ -1.14
RTN4-206ENST00000394611 RAB11AP62491 216 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 PLCXD2Q0VAA5 305 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 INPP5JQ15735 1006 aaPredicted RBP7.93□□□□□ -1.14
RTN4-206ENST00000394611 FBXO42Q6P3S6 717 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 C5orf46Q6UWT4 87 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 Q6ZNB5 142 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 SLC16A9Q7RTY1 509 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 OR2I1PQ8NGU4 316 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 OR6N1Q8NGY5 312 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 BSCL2Q96G97 398 aaPredicted RBP7.93□□□□□ -1.14
RTN4-206ENST00000394611 REG4Q9BYZ8 158 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 SLC19A3Q9BZV2 496 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 PTGES2Q9H7Z7 377 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 PLEKHJ1Q9NW61 149 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 HELZP42694 1942 aaKnown RBP7.93□□□□□ -1.14
RTN4-206ENST00000394611 BORCS7-ASMTA0A0B4J1R7 106 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 PRR32B1ATL7 298 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 C2CD4DB7Z1M9 353 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 TSTD3H0UI37 97 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 TBX6O95947 436 aaPredicted RBP7.93□□□□□ -1.14
RTN4-206ENST00000394611 APODP05090 189 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 HOXB2P14652 356 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 HNF1AP20823 631 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 HAAOP46952 286 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 GAS1P54826 345 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 C9orf135Q5VTT2 229 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 FBXW12Q6X9E4 464 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 DGAT2L6Q6ZPD8 337 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 SULF2Q8IWU5 870 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 ZNF587Q96SQ5 575 aaPredicted RBP7.93□□□□□ -1.14
RTN4-206ENST00000394611 LPAR4Q99677 370 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 PRSS27Q9BQR3 290 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 GDE1Q9NZC3 331 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 PADI1Q9ULC6 663 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 VSIG4Q9Y279 399 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 DENND4AQ7Z401 1863 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 ZNF407Q9C0G0 2248 aa7.93□□□□□ -1.14
RTN4-206ENST00000394611 TRAV1-2A0A0B4J238 106 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 C7orf77A4D0Y5 90 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 OTOL1A6NHN0 477 aaPredicted RBP7.92□□□□□ -1.14
RTN4-206ENST00000394611 A8MXK9 166 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 BET1O15155 118 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 GALR3O60755 368 aaPredicted RBP7.92□□□□□ -1.14
RTN4-206ENST00000394611 ADAM11O75078 769 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 HLA-HP01893 362 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 FCARP24071 287 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 CDAP32320 146 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 PRPS1P60891 318 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 RPS15AP62244 130 aaKnown RBP7.92□□□□□ -1.14
RTN4-206ENST00000394611 MFGE8Q08431 387 aaPredicted RBP7.92□□□□□ -1.14
RTN4-206ENST00000394611 NSDHLQ15738 373 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 ACKR1Q16570 336 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 OR2B11Q5JQS5 317 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 EEF1A1P5Q5VTE0 462 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 AGBL4Q5VU57 503 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 ZNF343Q6P1L6 599 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.92□□□□□ -1.14
RTN4-206ENST00000394611 MRPL41Q8IXM3 137 aaKnown RBP7.92□□□□□ -1.14
RTN4-206ENST00000394611 SPICQ8N5J4 248 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 OR6K3Q8NGY3 331 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 SLC2A12Q8TD20 617 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 HEATR5AQ86XA9 2040 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 VPS13AQ96RL7 3174 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 TRIOO75962 3097 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 TMEM212A6NML5 194 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 TMEM150CB9EJG8 249 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 ANGPTL7O43827 346 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 ONECUT2O95948 504 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 SCGB1D1O95968 90 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 FBP1P09467 338 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 ZNF93P35789 620 aaPredicted RBP7.92□□□□□ -1.14
RTN4-206ENST00000394611 SLC37A1P57057 533 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 GLO1Q04760 184 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 RASGEF1BQ0VAM2 473 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 TOMM34Q15785 309 aaPredicted RBP7.92□□□□□ -1.14
RTN4-206ENST00000394611 ZNF77Q15935 545 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 LCN15Q6UWW0 184 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 ZNF705AQ6ZN79 300 aaPredicted RBP7.92□□□□□ -1.14
RTN4-206ENST00000394611 LYG2Q86SG7 212 aa7.92□□□□□ -1.14
RTN4-206ENST00000394611 ADGRE4PQ86SQ3 457 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms