RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 PELI1Q96FA3 418 aa17.84■□□□□ 0.45
SHANK1-203ENST00000391813 PRRX2Q99811 253 aa17.84■□□□□ 0.45
SHANK1-203ENST00000391813 BARHL1Q9BZE3 327 aa17.84■□□□□ 0.45
SHANK1-203ENST00000391813 SLC35B3Q9H1N7 401 aa17.84■□□□□ 0.45
SHANK1-203ENST00000391813 TRAPPC2LQ9UL33 140 aa17.84■□□□□ 0.45
SHANK1-203ENST00000391813 PCBP3P57721 371 aaKnown RBP17.84■□□□□ 0.45
SHANK1-203ENST00000391813 VWA2Q5GFL6 755 aa17.84■□□□□ 0.45
SHANK1-203ENST00000391813 NCR3LG1Q68D85 454 aa17.84■□□□□ 0.45
SHANK1-203ENST00000391813 SLC16A14Q7RTX9 510 aa17.84■□□□□ 0.45
SHANK1-203ENST00000391813 PTP4A1Q93096 173 aa17.84■□□□□ 0.45
SHANK1-203ENST00000391813 HGDQ93099 445 aa17.84■□□□□ 0.45
SHANK1-203ENST00000391813 TINAGL1Q9GZM7 467 aaPredicted RBP17.84■□□□□ 0.45
SHANK1-203ENST00000391813 KIR3DX1Q9H7L2 352 aa17.84■□□□□ 0.45
SHANK1-203ENST00000391813 MAP1BP46821 2468 aaKnown RBP17.84■□□□□ 0.45
SHANK1-203ENST00000391813 C5orf67F2Z3F1 127 aa17.84■□□□□ 0.45
SHANK1-203ENST00000391813 MBTPS2O43462 519 aa17.84■□□□□ 0.45
SHANK1-203ENST00000391813 CD79AP11912 226 aa17.84■□□□□ 0.45
SHANK1-203ENST00000391813 SELENOPP49908 381 aa17.84■□□□□ 0.45
SHANK1-203ENST00000391813 SMAD2Q15796 467 aaKnown RBP17.84■□□□□ 0.45
SHANK1-203ENST00000391813 ZNF787Q6DD87 383 aa17.84■□□□□ 0.45
SHANK1-203ENST00000391813 LCN15Q6UWW0 184 aa17.84■□□□□ 0.45
SHANK1-203ENST00000391813 SSX7Q7RTT5 188 aa17.84■□□□□ 0.45
SHANK1-203ENST00000391813 MPC2O95563 127 aa17.83■□□□□ 0.45
SHANK1-203ENST00000391813 GLAP06280 429 aa17.83■□□□□ 0.45
SHANK1-203ENST00000391813 TMEM176BQ3YBM2 270 aaPredicted RBP17.83■□□□□ 0.45
SHANK1-203ENST00000391813 SLC25A30Q5SVS4 291 aa17.83■□□□□ 0.45
SHANK1-203ENST00000391813 PLXDC2Q6UX71 529 aa17.83■□□□□ 0.45
SHANK1-203ENST00000391813 ZFP62Q8NB50 900 aaPredicted RBP17.83■□□□□ 0.45
SHANK1-203ENST00000391813 GPR32P1Q8NGA4 272 aa17.83■□□□□ 0.45
SHANK1-203ENST00000391813 PIGTQ969N2 578 aa17.83■□□□□ 0.45
SHANK1-203ENST00000391813 MRGPRX1Q96LB2 322 aa17.83■□□□□ 0.45
SHANK1-203ENST00000391813 TEX101Q9BY14 249 aa17.83■□□□□ 0.45
SHANK1-203ENST00000391813 SEC11CQ9BY50 192 aa17.83■□□□□ 0.45
SHANK1-203ENST00000391813 SDCBPO00560 298 aaPredicted RBP17.83■□□□□ 0.45
SHANK1-203ENST00000391813 PI3P19957 117 aa17.83■□□□□ 0.45
SHANK1-203ENST00000391813 PGFP49763 221 aa17.83■□□□□ 0.45
SHANK1-203ENST00000391813 HSD17B7P56937 341 aa17.83■□□□□ 0.45
SHANK1-203ENST00000391813 ACKR1Q16570 336 aa17.83■□□□□ 0.45
SHANK1-203ENST00000391813 MIDNQ504T8 468 aa17.83■□□□□ 0.45
SHANK1-203ENST00000391813 OR11H7Q8NGC8 314 aa17.83■□□□□ 0.45
SHANK1-203ENST00000391813 C6orf106Q9H6K1 298 aaPredicted RBP17.83■□□□□ 0.45
SHANK1-203ENST00000391813 ZNF346Q9UL40 294 aaKnown RBP17.83■□□□□ 0.45
SHANK1-203ENST00000391813 FABP4P15090 132 aa17.83■□□□□ 0.44
SHANK1-203ENST00000391813 GUCA2AQ02747 115 aa17.83■□□□□ 0.44
SHANK1-203ENST00000391813 UBL7Q96S82 380 aaPredicted RBP17.83■□□□□ 0.44
SHANK1-203ENST00000391813 OPN4Q9UHM6 478 aa17.83■□□□□ 0.44
SHANK1-203ENST00000391813 CLDN34H7C241 214 aa17.83■□□□□ 0.44
SHANK1-203ENST00000391813 TMPRSS7Q7RTY8 843 aa17.83■□□□□ 0.44
SHANK1-203ENST00000391813 FAM24BQ8N5W8 94 aa17.83■□□□□ 0.44
SHANK1-203ENST00000391813 NPAS1Q99742 590 aa17.83■□□□□ 0.44
SHANK1-203ENST00000391813 LAMP3Q9UQV4 416 aa17.83■□□□□ 0.44
SHANK1-203ENST00000391813 ARID1AO14497 2285 aa17.82■□□□□ 0.44
SHANK1-203ENST00000391813 GATCO43716 136 aaKnown RBP17.82■□□□□ 0.44
SHANK1-203ENST00000391813 CLDN17P56750 224 aa17.82■□□□□ 0.44
SHANK1-203ENST00000391813 RPL18Q07020 188 aaKnown RBP17.82■□□□□ 0.44
SHANK1-203ENST00000391813 MZT1Q08AG7 82 aa17.82■□□□□ 0.44
SHANK1-203ENST00000391813 AARDQ4LEZ3 155 aa17.82■□□□□ 0.44
SHANK1-203ENST00000391813 SIGLECL1Q8N7X8 197 aa17.82■□□□□ 0.44
SHANK1-203ENST00000391813 OR52N5Q8NH56 324 aa17.82■□□□□ 0.44
SHANK1-203ENST00000391813 CPT1CQ8TCG5 803 aa17.82■□□□□ 0.44
SHANK1-203ENST00000391813 ORAI1Q96D31 301 aa17.82■□□□□ 0.44
SHANK1-203ENST00000391813 SCRG1O75711 98 aa17.82■□□□□ 0.44
SHANK1-203ENST00000391813 OR5H8P0DN80 308 aa17.82■□□□□ 0.44
SHANK1-203ENST00000391813 NHLRC1Q6VVB1 395 aa17.82■□□□□ 0.44
SHANK1-203ENST00000391813 ZNF331Q9NQX6 463 aaPredicted RBP17.82■□□□□ 0.44
SHANK1-203ENST00000391813 SIGLEC7Q9Y286 467 aa17.82■□□□□ 0.44
SHANK1-203ENST00000391813 NSG1A0A0A6YYJ2 146 aa17.82■□□□□ 0.44
SHANK1-203ENST00000391813 TCRBV16S1A1N1A0A5B0 115 aa17.82■□□□□ 0.44
SHANK1-203ENST00000391813 EIF1BO60739 113 aaKnown RBP17.82■□□□□ 0.44
SHANK1-203ENST00000391813 ACOT6Q3I5F7 207 aaPredicted RBP17.82■□□□□ 0.44
SHANK1-203ENST00000391813 SLC22A13Q9Y226 551 aa17.82■□□□□ 0.44
SHANK1-203ENST00000391813 KCNE1BA0A087WTH5 132 aa17.82■□□□□ 0.44
SHANK1-203ENST00000391813 AGERQ15109 404 aa17.82■□□□□ 0.44
SHANK1-203ENST00000391813 PCK2Q16822 640 aa17.82■□□□□ 0.44
SHANK1-203ENST00000391813 TUSC1Q2TAM9 212 aa17.82■□□□□ 0.44
SHANK1-203ENST00000391813 TFAP2EQ6VUC0 442 aa17.82■□□□□ 0.44
SHANK1-203ENST00000391813 HSD17B8Q92506 261 aa17.82■□□□□ 0.44
SHANK1-203ENST00000391813 SLAMF6Q96DU3 332 aa17.82■□□□□ 0.44
SHANK1-203ENST00000391813 CNRIP1Q96F85 164 aaPredicted RBP17.82■□□□□ 0.44
SHANK1-203ENST00000391813 SUCNR1Q9BXA5 334 aa17.82■□□□□ 0.44
SHANK1-203ENST00000391813 MIOXQ9UGB7 285 aa17.82■□□□□ 0.44
SHANK1-203ENST00000391813 FBXO4Q9UKT5 387 aa17.82■□□□□ 0.44
SHANK1-203ENST00000391813 G3V3Q6 166 aa17.81■□□□□ 0.44
SHANK1-203ENST00000391813 ERVH48-1M5A8F1 160 aa17.81■□□□□ 0.44
SHANK1-203ENST00000391813 ELLP55199 621 aaPredicted RBP17.81■□□□□ 0.44
SHANK1-203ENST00000391813 TRILQ7L0X0 811 aa17.81■□□□□ 0.44
SHANK1-203ENST00000391813 TP53I13Q8NBR0 393 aaPredicted RBP17.81■□□□□ 0.44
SHANK1-203ENST00000391813 RTN4IP1Q8WWV3 396 aaPredicted RBP17.81■□□□□ 0.44
SHANK1-203ENST00000391813 TMPRSS13Q9BYE2 586 aa17.81■□□□□ 0.44
SHANK1-203ENST00000391813 WSB2Q9NYS7 404 aaPredicted RBP17.81■□□□□ 0.44
SHANK1-203ENST00000391813 OR5V1Q9UGF6 321 aa17.81■□□□□ 0.44
SHANK1-203ENST00000391813 FIGNL2A6NMB9 653 aa17.81■□□□□ 0.44
SHANK1-203ENST00000391813 RRP8O43159 456 aaKnown RBP17.81■□□□□ 0.44
SHANK1-203ENST00000391813 NOVA1P51513 510 aaKnown RBP17.81■□□□□ 0.44
SHANK1-203ENST00000391813 PLA1AQ53H76 456 aa17.81■□□□□ 0.44
SHANK1-203ENST00000391813 OVCH2Q7RTZ1 564 aa17.81■□□□□ 0.44
SHANK1-203ENST00000391813 ABI3BPQ7Z7G0 1075 aa17.81■□□□□ 0.44
SHANK1-203ENST00000391813 ZNF429Q86V71 674 aa17.81■□□□□ 0.44
SHANK1-203ENST00000391813 S1PR5Q9H228 398 aa17.81■□□□□ 0.44
SHANK1-203ENST00000391813 ELOA3CA0A087WX78 387 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms