RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 SLC22A2O15244 555 aa11.41□□□□□ -0.58
CXCL12-202ENST00000374426 GPR137BO60478 399 aa11.41□□□□□ -0.58
CXCL12-202ENST00000374426 FCN3O75636 299 aa11.41□□□□□ -0.58
CXCL12-202ENST00000374426 LCATP04180 440 aa11.41□□□□□ -0.58
CXCL12-202ENST00000374426 NCK1P16333 377 aa11.41□□□□□ -0.58
CXCL12-202ENST00000374426 RHCEP18577 417 aa11.41□□□□□ -0.58
CXCL12-202ENST00000374426 ANOS1P23352 680 aa11.41□□□□□ -0.58
CXCL12-202ENST00000374426 GGT2P36268 569 aa11.41□□□□□ -0.58
CXCL12-202ENST00000374426 RPL15P61313 204 aaKnown RBP11.41□□□□□ -0.58
CXCL12-202ENST00000374426 MALLQ13021 153 aa11.41□□□□□ -0.58
CXCL12-202ENST00000374426 PDCD1Q15116 288 aa11.41□□□□□ -0.58
CXCL12-202ENST00000374426 OR8G1Q15617 311 aa11.41□□□□□ -0.58
CXCL12-202ENST00000374426 KCNJ8Q15842 424 aa11.41□□□□□ -0.58
CXCL12-202ENST00000374426 C8orf82Q6P1X6 216 aaPredicted RBP11.41□□□□□ -0.58
CXCL12-202ENST00000374426 HDXQ7Z353 690 aa11.41□□□□□ -0.58
CXCL12-202ENST00000374426 ZBTB46Q86UZ6 589 aa11.41□□□□□ -0.58
CXCL12-202ENST00000374426 BOLLQ8N9W6 283 aaKnown RBP11.41□□□□□ -0.58
CXCL12-202ENST00000374426 LINC01006Q8NI28 216 aa11.41□□□□□ -0.58
CXCL12-202ENST00000374426 RP9Q8TA86 221 aaKnown RBP11.41□□□□□ -0.58
CXCL12-202ENST00000374426 DYRK2Q92630 601 aa11.41□□□□□ -0.58
CXCL12-202ENST00000374426 FAM162AQ96A26 154 aa11.41□□□□□ -0.58
CXCL12-202ENST00000374426 C7orf34Q96L11 122 aa11.41□□□□□ -0.58
CXCL12-202ENST00000374426 DHRS1Q96LJ7 313 aa11.41□□□□□ -0.58
CXCL12-202ENST00000374426 RBM4BQ9BQ04 359 aaKnown RBP11.41□□□□□ -0.58
CXCL12-202ENST00000374426 FUZQ9BT04 418 aa11.41□□□□□ -0.58
CXCL12-202ENST00000374426 SIRPDQ9H106 197 aa11.41□□□□□ -0.58
CXCL12-202ENST00000374426 VIPAS39Q9H9C1 493 aa11.41□□□□□ -0.58
CXCL12-202ENST00000374426 FN3KRPQ9HA64 309 aa11.41□□□□□ -0.58
CXCL12-202ENST00000374426 RPRD1BQ9NQG5 326 aaKnown RBP11.41□□□□□ -0.58
CXCL12-202ENST00000374426 FAM32AQ9Y421 112 aaKnown RBP11.41□□□□□ -0.58
CXCL12-202ENST00000374426 RNF114Q9Y508 228 aa11.41□□□□□ -0.58
CXCL12-202ENST00000374426 IGHV1-69DA0A0B4J2H0 117 aa11.4□□□□□ -0.58
CXCL12-202ENST00000374426 ARPC3O15145 178 aa11.4□□□□□ -0.58
CXCL12-202ENST00000374426 ADAM20O43506 726 aa11.4□□□□□ -0.58
CXCL12-202ENST00000374426 DIRAS1O95057 198 aa11.4□□□□□ -0.58
CXCL12-202ENST00000374426 IGHV1-69P01742 117 aa11.4□□□□□ -0.58
CXCL12-202ENST00000374426 IGHV4-59P01825 116 aa11.4□□□□□ -0.58
CXCL12-202ENST00000374426 HIST1H1CP16403 213 aaKnown RBP11.4□□□□□ -0.58
CXCL12-202ENST00000374426 PROK1P58294 105 aa11.4□□□□□ -0.58
CXCL12-202ENST00000374426 OR8B8Q15620 311 aa11.4□□□□□ -0.58
CXCL12-202ENST00000374426 SLC36A3Q495N2 470 aa11.4□□□□□ -0.58
CXCL12-202ENST00000374426 METTL11BQ5VVY1 283 aa11.4□□□□□ -0.58
CXCL12-202ENST00000374426 MRPL21Q7Z2W9 205 aaKnown RBP11.4□□□□□ -0.58
CXCL12-202ENST00000374426 FAM86B1Q8N7N1 296 aa11.4□□□□□ -0.58
CXCL12-202ENST00000374426 PNLDC1Q8NA58 520 aaKnown RBP11.4□□□□□ -0.58
CXCL12-202ENST00000374426 PLPP7Q8NBV4 271 aa11.4□□□□□ -0.58
CXCL12-202ENST00000374426 OR2AJ1Q8NGZ0 328 aa11.4□□□□□ -0.58
CXCL12-202ENST00000374426 OR4K13Q8NH42 304 aa11.4□□□□□ -0.58
CXCL12-202ENST00000374426 OR52J3Q8NH60 311 aa11.4□□□□□ -0.58
CXCL12-202ENST00000374426 TBC1D15Q8TC07 691 aa11.4□□□□□ -0.58
CXCL12-202ENST00000374426 FANK1Q8TC84 345 aa11.4□□□□□ -0.58
CXCL12-202ENST00000374426 MAP6Q96JE9 813 aa11.4□□□□□ -0.58
CXCL12-202ENST00000374426 HOPXQ9BPY8 73 aaPredicted RBP11.4□□□□□ -0.58
CXCL12-202ENST00000374426 ADAT1Q9BUB4 502 aaKnown RBP11.4□□□□□ -0.58
CXCL12-202ENST00000374426 TRIM15Q9C019 465 aa11.4□□□□□ -0.58
CXCL12-202ENST00000374426 SLC22A4Q9H015 551 aa11.4□□□□□ -0.58
CXCL12-202ENST00000374426 RASSF4Q9H2L5 321 aa11.4□□□□□ -0.58
CXCL12-202ENST00000374426 A0A0U1RQK1 487 aa11.39□□□□□ -0.59
CXCL12-202ENST00000374426 C5orf63A6NC05 138 aa11.39□□□□□ -0.59
CXCL12-202ENST00000374426 OR6C68A6NDL8 312 aa11.39□□□□□ -0.59
CXCL12-202ENST00000374426 OOEPA6NGQ2 149 aa11.39□□□□□ -0.59
CXCL12-202ENST00000374426 M0R135 149 aa11.39□□□□□ -0.59
CXCL12-202ENST00000374426 NDUFA2O43678 99 aa11.39□□□□□ -0.59
CXCL12-202ENST00000374426 GMDSO60547 372 aa11.39□□□□□ -0.59
CXCL12-202ENST00000374426 CLPXO76031 633 aa11.39□□□□□ -0.59
CXCL12-202ENST00000374426 RENP00797 406 aa11.39□□□□□ -0.59
CXCL12-202ENST00000374426 GYPAP02724 150 aa11.39□□□□□ -0.59
CXCL12-202ENST00000374426 COX4I1P13073 169 aa11.39□□□□□ -0.59
CXCL12-202ENST00000374426 IER3P46695 156 aa11.39□□□□□ -0.59
CXCL12-202ENST00000374426 TPTEP56180 551 aa11.39□□□□□ -0.59
CXCL12-202ENST00000374426 ZNF92Q03936 586 aa11.39□□□□□ -0.59
CXCL12-202ENST00000374426 RFX4Q33E94 735 aa11.39□□□□□ -0.59
CXCL12-202ENST00000374426 SNAI3Q3KNW1 292 aa11.39□□□□□ -0.59
CXCL12-202ENST00000374426 LDLRAD3Q86YD5 345 aa11.39□□□□□ -0.59
CXCL12-202ENST00000374426 FAM90A1Q86YD7 464 aa11.39□□□□□ -0.59
CXCL12-202ENST00000374426 OR2AE1Q8NHA4 323 aa11.39□□□□□ -0.59
CXCL12-202ENST00000374426 LHX4Q969G2 390 aa11.39□□□□□ -0.59
CXCL12-202ENST00000374426 ZNF799Q96GE5 643 aa11.39□□□□□ -0.59
CXCL12-202ENST00000374426 PKP2Q99959 881 aa11.39□□□□□ -0.59
CXCL12-202ENST00000374426 KCTD14Q9BQ13 255 aaPredicted RBP11.39□□□□□ -0.59
CXCL12-202ENST00000374426 OR52D1Q9H346 318 aa11.39□□□□□ -0.59
CXCL12-202ENST00000374426 FN3KQ9H479 309 aa11.39□□□□□ -0.59
CXCL12-202ENST00000374426 KRCC1Q9NPI7 259 aaPredicted RBP11.39□□□□□ -0.59
CXCL12-202ENST00000374426 MRPL22Q9NWU5 206 aaKnown RBP11.39□□□□□ -0.59
CXCL12-202ENST00000374426 NOP16Q9Y3C1 178 aaKnown RBP11.39□□□□□ -0.59
CXCL12-202ENST00000374426 TRAV38-1A0A0B4J264 116 aa11.38□□□□□ -0.59
CXCL12-202ENST00000374426 OR10H3O60404 316 aa11.38□□□□□ -0.59
CXCL12-202ENST00000374426 HLA-DQA2P01906 255 aa11.38□□□□□ -0.59
CXCL12-202ENST00000374426 SLC6A6P31641 620 aa11.38□□□□□ -0.59
CXCL12-202ENST00000374426 OTX1P32242 354 aaPredicted RBP11.38□□□□□ -0.59
CXCL12-202ENST00000374426 ARF6P62330 175 aa11.38□□□□□ -0.59
CXCL12-202ENST00000374426 TAF9Q16594 264 aa11.38□□□□□ -0.59
CXCL12-202ENST00000374426 ZNF826PQ6ZT77 177 aa11.38□□□□□ -0.59
CXCL12-202ENST00000374426 BTN2A1Q7KYR7 527 aa11.38□□□□□ -0.59
CXCL12-202ENST00000374426 PIP4P2Q8N4L2 257 aa11.38□□□□□ -0.59
CXCL12-202ENST00000374426 GCSAMQ8N6F7 178 aa11.38□□□□□ -0.59
CXCL12-202ENST00000374426 SDR9C7Q8NEX9 313 aa11.38□□□□□ -0.59
CXCL12-202ENST00000374426 UBE2FQ969M7 185 aa11.38□□□□□ -0.59
CXCL12-202ENST00000374426 IFT27Q9BW83 186 aa11.38□□□□□ -0.59
CXCL12-202ENST00000374426 TRIM36Q9NQ86 728 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms