RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 CLDN18P56856 261 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 RAB11BQ15907 218 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 HIST3H3Q16695 136 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 RSPO1Q2MKA7 263 aaPredicted RBP3.02□□□□□ -1.93
LIG4-205ENST00000614526 SNAI3Q3KNW1 292 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 TMEM244Q5VVB8 128 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 C3P1Q6ZMU1 363 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 ZNF704Q6ZNC4 412 aaPredicted RBP3.02□□□□□ -1.93
LIG4-205ENST00000614526 SLC16A14Q7RTX9 510 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 NUFIP2Q7Z417 695 aaKnown RBP3.02□□□□□ -1.93
LIG4-205ENST00000614526 MCEMP1Q8IX19 187 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 ACBD4Q8NC06 268 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 ADPRHL1Q8NDY3 354 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 DVL3Q92997 716 aaPredicted RBP3.02□□□□□ -1.93
LIG4-205ENST00000614526 NABP1Q96AH0 204 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 PHF21AQ96BD5 680 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 FAM3DQ96BQ1 224 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 KCTD12Q96CX2 325 aaKnown RBP3.02□□□□□ -1.93
LIG4-205ENST00000614526 S100A16Q96FQ6 103 aaKnown RBP3.02□□□□□ -1.93
LIG4-205ENST00000614526 FOXB1Q99853 325 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 RNF121Q9H920 327 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 SP140LQ9H930 580 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 PLEKHA1Q9HB21 404 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 ELL3Q9HB65 397 aaPredicted RBP3.02□□□□□ -1.93
LIG4-205ENST00000614526 FANCFQ9NPI8 374 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 PNRC2Q9NPJ4 139 aaKnown RBP3.02□□□□□ -1.93
LIG4-205ENST00000614526 STEAP1Q9UHE8 339 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 RCE1Q9Y256 329 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 KLF13Q9Y2Y9 288 aaPredicted RBP3.02□□□□□ -1.93
LIG4-205ENST00000614526 KMT2EQ8IZD2 1858 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 CHD8Q9HCK8 2581 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 A0A1B0GTI1 187 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 NPIPB13A6NJU9 1138 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 NPIPB4C9JG80 1138 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 K7EM74 188 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 SGCEO43556 437 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 NME2P1O60361 137 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 HLA-DQB1P01920 261 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 CSN2P05814 226 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 HCKP08631 526 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 CD79AP11912 226 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 ARSBP15848 533 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 NME2P22392 152 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 HTR2CP28335 458 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 DCTDP32321 178 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 DDOSTP39656 456 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 GDNFP39905 211 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 HTR5AP47898 357 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 MMP16P51512 607 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 ARF1P84077 181 aaKnown RBP3.02□□□□□ -1.93
LIG4-205ENST00000614526 TSC22D1Q15714 1073 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 PCK2Q16822 640 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 C11orf91Q3C1V1 193 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 MOGAT2Q3SYC2 334 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 CCDC92Q53HC0 331 aaPredicted RBP3.02□□□□□ -1.93
LIG4-205ENST00000614526 TMEM255AQ5JRV8 349 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 UBE2NLQ5JXB2 153 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 PYHIN1Q6K0P9 492 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 HDDC2Q7Z4H3 204 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 SKA3Q8IX90 412 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 C20orf196Q8IYI0 205 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 ELMOD2Q8IZ81 293 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 MEIOBQ8N635 442 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 CHST4Q8NCG5 386 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 MDS2Q8NDY4 140 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 GJC3Q8NFK1 279 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 OR10K1Q8NGX5 313 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 TMEM54Q969K7 222 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 YIPF5Q969M3 257 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 PIGTQ969N2 578 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 CPNE4Q96A23 557 aaPredicted RBP3.02□□□□□ -1.93
LIG4-205ENST00000614526 UPRTQ96BW1 309 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 NTNG2Q96CW9 530 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 GPER1Q99527 375 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 C1QTNF6Q9BXI9 259 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 OR2B2Q9GZK3 357 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 BANF2Q9H503 90 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 CNTD2Q9H8S5 307 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 ZNF275Q9NSD4 429 aaPredicted RBP3.02□□□□□ -1.93
LIG4-205ENST00000614526 SPRR3Q9UBC9 169 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 UPB1Q9UBR1 384 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 FOXD3Q9UJU5 478 aaPredicted RBP3.02□□□□□ -1.93
LIG4-205ENST00000614526 KLK13Q9UKR3 277 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 FLVCR2Q9UPI3 526 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 RBMX2Q9Y388 322 aaKnown RBP3.02□□□□□ -1.93
LIG4-205ENST00000614526 ICE1Q9Y2F5 2266 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 ZZEF1O43149 2961 aa3.02□□□□□ -1.93
LIG4-205ENST00000614526 NBEAQ8NFP9 2946 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 TRGV5A0A0B4J1U4 118 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 A0A0B4J293 547 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 TMEM272A0A1B0GTI8 110 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 M0R135 149 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 ORC5O43913 435 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 GMDSO60547 372 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 CCNKO75909 580 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 UBL3O95164 117 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 RAF1P04049 648 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 CD1AP06126 327 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 CEACAM1P13688 526 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 ZNF24P17028 368 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 301.3 ms