RNA–Protein interactions for RNA: ENST00000510131.1

ARHGEF28-209, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5

Gene ARHGEF28, Length 280 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-209ENST00000510131 DNHD1Q96M86 4753 aa0.55□□□□□ -2.32
ARHGEF28-209ENST00000510131 CNTNAP1P78357 1384 aa0.55□□□□□ -2.32
ARHGEF28-209ENST00000510131 GPR98Q8WXG9 6306 aa0.55□□□□□ -2.32
ARHGEF28-209ENST00000510131 STRCP1A6NGW2 1772 aa0.55□□□□□ -2.32
ARHGEF28-209ENST00000510131 SCAF11Q99590 1463 aaKnown RBP0.54□□□□□ -2.32
ARHGEF28-209ENST00000510131 EFCAB6Q5THR3 1501 aa0.54□□□□□ -2.32
ARHGEF28-209ENST00000510131 CEP170BQ9Y4F5 1589 aaPredicted RBP0.54□□□□□ -2.32
ARHGEF28-209ENST00000510131 ADCY10Q96PN6 1610 aa0.54□□□□□ -2.32
ARHGEF28-209ENST00000510131 BIVM-ERCC5R4GMW8 1640 aa0.54□□□□□ -2.32
ARHGEF28-209ENST00000510131 KDM5AP29375 1690 aaKnown RBP0.54□□□□□ -2.32
ARHGEF28-209ENST00000510131 PPP1R2P9O14990 202 aa0.54□□□□□ -2.32
ARHGEF28-209ENST00000510131 NVLO15381 856 aaKnown RBP0.54□□□□□ -2.32
ARHGEF28-209ENST00000510131 CTSGP08311 255 aa0.54□□□□□ -2.32
ARHGEF28-209ENST00000510131 P0DMU3 169 aa0.54□□□□□ -2.32
ARHGEF28-209ENST00000510131 FAM231AP0DMU4 169 aa0.54□□□□□ -2.32
ARHGEF28-209ENST00000510131 FAM231CP0DMU5 169 aa0.54□□□□□ -2.32
ARHGEF28-209ENST00000510131 ERGP11308 486 aa0.54□□□□□ -2.32
ARHGEF28-209ENST00000510131 RPA2P15927 270 aa0.54□□□□□ -2.32
ARHGEF28-209ENST00000510131 TICAM2Q86XR7 235 aa0.54□□□□□ -2.32
ARHGEF28-209ENST00000510131 ZNF619Q8N2I2 560 aa0.54□□□□□ -2.32
ARHGEF28-209ENST00000510131 CCDC110Q8TBZ0 833 aa0.54□□□□□ -2.32
ARHGEF28-209ENST00000510131 THRSPQ92748 146 aa0.54□□□□□ -2.32
ARHGEF28-209ENST00000510131 C20orf166-AS1Q96NR2 134 aa0.54□□□□□ -2.32
ARHGEF28-209ENST00000510131 HMGXB4Q9UGU5 601 aa0.54□□□□□ -2.32
ARHGEF28-209ENST00000510131 PIGLQ9Y2B2 252 aa0.54□□□□□ -2.32
ARHGEF28-209ENST00000510131 DENND4AQ7Z401 1863 aa0.54□□□□□ -2.32
ARHGEF28-209ENST00000510131 FBN2P35556 2912 aa0.54□□□□□ -2.32
ARHGEF28-209ENST00000510131 ZNF469Q96JG9 3925 aaPredicted RBP0.54□□□□□ -2.32
ARHGEF28-209ENST00000510131 DCAF1Q9Y4B6 1507 aa0.54□□□□□ -2.32
ARHGEF28-209ENST00000510131 MYO18BQ8IUG5 2567 aa0.53□□□□□ -2.32
ARHGEF28-209ENST00000510131 REV3LO60673 3130 aa0.53□□□□□ -2.32
ARHGEF28-209ENST00000510131 FRMPD1Q5SYB0 1578 aa0.53□□□□□ -2.32
ARHGEF28-209ENST00000510131 RANBP2P49792 3224 aaKnown RBP0.53□□□□□ -2.32
ARHGEF28-209ENST00000510131 TARBP1Q13395 1621 aaKnown RBP0.53□□□□□ -2.32
ARHGEF28-209ENST00000510131 RNF17Q9BXT8 1623 aaKnown RBP0.53□□□□□ -2.32
ARHGEF28-209ENST00000510131 IGKV1D-43A0A0B4J1Z2 117 aa0.53□□□□□ -2.32
ARHGEF28-209ENST00000510131 IDH1O75874 414 aaKnown RBP0.53□□□□□ -2.32
ARHGEF28-209ENST00000510131 EIF4EP06730 217 aaKnown RBP0.53□□□□□ -2.32
ARHGEF28-209ENST00000510131 YWHAGP61981 247 aaKnown RBP eCLIP0.53□□□□□ -2.32
ARHGEF28-209ENST00000510131 IL5RAQ01344 420 aa0.53□□□□□ -2.32
ARHGEF28-209ENST00000510131 CYP24A1Q07973 514 aa0.53□□□□□ -2.32
ARHGEF28-209ENST00000510131 BTN1A1Q13410 526 aa0.53□□□□□ -2.32
ARHGEF28-209ENST00000510131 SLC25A35Q3KQZ1 300 aa0.53□□□□□ -2.32
ARHGEF28-209ENST00000510131 FAM131AQ6UXB0 335 aa0.53□□□□□ -2.32
ARHGEF28-209ENST00000510131 PSTKQ8IV42 348 aaKnown RBP0.53□□□□□ -2.32
ARHGEF28-209ENST00000510131 SLC2A14Q8TDB8 520 aa0.53□□□□□ -2.32
ARHGEF28-209ENST00000510131 PIBF1Q8WXW3 757 aa0.53□□□□□ -2.32
ARHGEF28-209ENST00000510131 RPRD1AQ96P16 312 aaPredicted RBP0.53□□□□□ -2.32
ARHGEF28-209ENST00000510131 THUMPD2Q9BTF0 503 aaKnown RBP0.53□□□□□ -2.32
ARHGEF28-209ENST00000510131 ACTR3BQ9P1U1 418 aa0.53□□□□□ -2.32
ARHGEF28-209ENST00000510131 ADAM28Q9UKQ2 775 aa0.53□□□□□ -2.32
ARHGEF28-209ENST00000510131 GOLT1BQ9Y3E0 138 aa0.53□□□□□ -2.32
ARHGEF28-209ENST00000510131 CHD8Q9HCK8 2581 aa0.53□□□□□ -2.32
ARHGEF28-209ENST00000510131 ATP8B3O60423 1300 aa0.53□□□□□ -2.32
ARHGEF28-209ENST00000510131 MYO9BQ13459 2157 aa0.53□□□□□ -2.32
ARHGEF28-209ENST00000510131 TRANK1O15050 2925 aa0.53□□□□□ -2.32
ARHGEF28-209ENST00000510131 GRIN2AQ12879 1464 aa0.53□□□□□ -2.33
ARHGEF28-209ENST00000510131 NAV2Q8IVL1 2488 aa0.53□□□□□ -2.33
ARHGEF28-209ENST00000510131 TET3O43151 1660 aa0.53□□□□□ -2.33
ARHGEF28-209ENST00000510131 KIAA1109Q2LD37 5005 aa0.53□□□□□ -2.33
ARHGEF28-209ENST00000510131 ROBO1Q9Y6N7 1651 aa0.53□□□□□ -2.33
ARHGEF28-209ENST00000510131 NUP188Q5SRE5 1749 aa0.52□□□□□ -2.33
ARHGEF28-209ENST00000510131 TNS1Q9HBL0 1735 aaKnown RBP0.52□□□□□ -2.33
ARHGEF28-209ENST00000510131 USP34Q70CQ2 3546 aa0.52□□□□□ -2.33
ARHGEF28-209ENST00000510131 NAV3Q8IVL0 2385 aa0.52□□□□□ -2.33
ARHGEF28-209ENST00000510131 PTPN13Q12923 2485 aa0.52□□□□□ -2.33
ARHGEF28-209ENST00000510131 FASNP49327 2511 aaKnown RBP0.52□□□□□ -2.33
ARHGEF28-209ENST00000510131 PALMO75781 387 aa0.52□□□□□ -2.33
ARHGEF28-209ENST00000510131 GPX4P36969 197 aaPredicted RBP0.52□□□□□ -2.33
ARHGEF28-209ENST00000510131 RBM34P42696 430 aaKnown RBP0.52□□□□□ -2.33
ARHGEF28-209ENST00000510131 SSR4P51571 173 aa0.52□□□□□ -2.33
ARHGEF28-209ENST00000510131 PRB3Q04118 309 aaPredicted RBP0.52□□□□□ -2.33
ARHGEF28-209ENST00000510131 C2orf54Q08AI8 447 aa0.52□□□□□ -2.33
ARHGEF28-209ENST00000510131 ANKRD26P1Q6NSI1 321 aa0.52□□□□□ -2.33
ARHGEF28-209ENST00000510131 CCDC73Q6ZRK6 1079 aa0.52□□□□□ -2.33
ARHGEF28-209ENST00000510131 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.52□□□□□ -2.33
ARHGEF28-209ENST00000510131 IFT74Q96LB3 600 aa0.52□□□□□ -2.33
ARHGEF28-209ENST00000510131 TPPP3Q9BW30 176 aa0.52□□□□□ -2.33
ARHGEF28-209ENST00000510131 NCOA1Q15788 1441 aa0.52□□□□□ -2.33
ARHGEF28-209ENST00000510131 CDK12Q9NYV4 1490 aaPredicted RBP0.52□□□□□ -2.33
ARHGEF28-209ENST00000510131 BAZ1BQ9UIG0 1483 aaKnown RBP0.52□□□□□ -2.33
ARHGEF28-209ENST00000510131 ASH1LQ9NR48 2969 aaKnown RBP0.52□□□□□ -2.33
ARHGEF28-209ENST00000510131 URB2Q14146 1524 aaKnown RBP0.52□□□□□ -2.33
ARHGEF28-209ENST00000510131 PRUNE2Q8WUY3 3088 aa0.52□□□□□ -2.33
ARHGEF28-209ENST00000510131 LAMC3Q9Y6N6 1575 aa0.52□□□□□ -2.33
ARHGEF28-209ENST00000510131 CASZ1Q86V15 1759 aa0.52□□□□□ -2.33
ARHGEF28-209ENST00000510131 XIRP1Q702N8 1843 aaKnown RBP0.52□□□□□ -2.33
ARHGEF28-209ENST00000510131 DOPEY1Q5JWR5 2465 aa0.52□□□□□ -2.33
ARHGEF28-209ENST00000510131 PIK3C2AO00443 1686 aa0.51□□□□□ -2.33
ARHGEF28-209ENST00000510131 SYNGR2O43760 224 aa0.51□□□□□ -2.33
ARHGEF28-209ENST00000510131 MED14O60244 1454 aa0.51□□□□□ -2.33
ARHGEF28-209ENST00000510131 PHLPP1O60346 1717 aa0.51□□□□□ -2.33
ARHGEF28-209ENST00000510131 ADCY9O60503 1353 aa0.51□□□□□ -2.33
ARHGEF28-209ENST00000510131 BRD4O60885 1362 aaPredicted RBP0.51□□□□□ -2.33
ARHGEF28-209ENST00000510131 EEDO75530 441 aaKnown RBP0.51□□□□□ -2.33
ARHGEF28-209ENST00000510131 ABCA8O94911 1581 aa0.51□□□□□ -2.33
ARHGEF28-209ENST00000510131 PRR3P79522 188 aaKnown RBP0.51□□□□□ -2.33
ARHGEF28-209ENST00000510131 PNOCQ13519 176 aa0.51□□□□□ -2.33
ARHGEF28-209ENST00000510131 NWD1Q149M9 1564 aa0.51□□□□□ -2.33
ARHGEF28-209ENST00000510131 KRTAP25-1Q3LHN0 102 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms