RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 PGM2L1Q6PCE3 622 aa9.15□□□□□ -0.94
RNF4-212ENST00000509258 BTNL3Q6UXE8 466 aa9.15□□□□□ -0.94
RNF4-212ENST00000509258 FBXW12Q6X9E4 464 aa9.15□□□□□ -0.94
RNF4-212ENST00000509258 JAZF1Q86VZ6 243 aa9.15□□□□□ -0.94
RNF4-212ENST00000509258 BHLHE23Q8NDY6 225 aa9.15□□□□□ -0.94
RNF4-212ENST00000509258 DEFB108BQ8NET1 73 aa9.15□□□□□ -0.94
RNF4-212ENST00000509258 OR9Q1Q8NGQ5 310 aa9.15□□□□□ -0.94
RNF4-212ENST00000509258 DVL3Q92997 716 aaPredicted RBP9.15□□□□□ -0.94
RNF4-212ENST00000509258 PTP4A1Q93096 173 aa9.15□□□□□ -0.94
RNF4-212ENST00000509258 MEGF10Q96KG7 1140 aa9.15□□□□□ -0.94
RNF4-212ENST00000509258 CCT8L2Q96SF2 557 aa9.15□□□□□ -0.94
RNF4-212ENST00000509258 HDHD2Q9H0R4 259 aa9.15□□□□□ -0.94
RNF4-212ENST00000509258 ZNF696Q9H7X3 374 aa9.15□□□□□ -0.94
RNF4-212ENST00000509258 PATZ1Q9HBE1 687 aaKnown RBP9.15□□□□□ -0.94
RNF4-212ENST00000509258 GCM1Q9NP62 436 aa9.15□□□□□ -0.94
RNF4-212ENST00000509258 ACTR3BQ9P1U1 418 aa9.15□□□□□ -0.94
RNF4-212ENST00000509258 ATPIF1Q9UII2 106 aa9.15□□□□□ -0.94
RNF4-212ENST00000509258 NUP50Q9UKX7 468 aa9.15□□□□□ -0.94
RNF4-212ENST00000509258 PPP1R3CQ9UQK1 317 aa9.15□□□□□ -0.94
RNF4-212ENST00000509258 PCDHGB1Q9Y5G3 927 aa9.15□□□□□ -0.94
RNF4-212ENST00000509258 SOX21Q9Y651 276 aaPredicted RBP9.15□□□□□ -0.94
RNF4-212ENST00000509258 CDH10Q9Y6N8 788 aa9.15□□□□□ -0.94
RNF4-212ENST00000509258 TRRAPQ9Y4A5 3859 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 A0A1B0GWJ7 208 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 IQCF6A8MYZ5 107 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 F5H5K5 113 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 TMEM178BH3BS89 294 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 TNFRSF11BO00300 401 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 KCNAB3O43448 404 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 SOX14O95416 240 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 RENP00797 406 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 GYPBP06028 91 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 MDH2P40926 338 aaKnown RBP9.14□□□□□ -0.95
RNF4-212ENST00000509258 MTNR1AP48039 350 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 SMIM11AP58511 58 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 MXRA7P84157 204 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 TRAP1Q12931 704 aaKnown RBP9.14□□□□□ -0.95
RNF4-212ENST00000509258 ZNF154Q13106 437 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 GK2Q14410 553 aaPredicted RBP9.14□□□□□ -0.95
RNF4-212ENST00000509258 TUSC1Q2TAM9 212 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 KLF17Q5JT82 389 aaPredicted RBP9.14□□□□□ -0.95
RNF4-212ENST00000509258 LCN8Q6JVE9 175 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 DNM1P34Q6PK57 102 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 C16orf89Q6UX73 402 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 DOK3Q7L591 496 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 TMEM179BQ7Z7N9 219 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 LRRC28Q86X40 367 aaPredicted RBP9.14□□□□□ -0.95
RNF4-212ENST00000509258 C1orf87Q8N0U7 546 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 SIGLECL1Q8N7X8 197 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 SLC37A3Q8NCC5 494 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 C19orf18Q8NEA5 215 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 GJC3Q8NFK1 279 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 OR8G5Q8NG78 346 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 APOBEC3DQ96AK3 386 aaPredicted RBP9.14□□□□□ -0.95
RNF4-212ENST00000509258 MCUR1Q96AQ8 359 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 PLEKHA8Q96JA3 519 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 SLC30A2Q9BRI3 323 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 C1QTNF5Q9BXJ0 243 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 ARMC1Q9NVT9 282 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 LRCH1Q9Y2L9 728 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 POLR3KQ9Y2Y1 108 aaPredicted RBP9.14□□□□□ -0.95
RNF4-212ENST00000509258 U3KQV3 271 aa9.14□□□□□ -0.95
RNF4-212ENST00000509258 DNAJC9-AS1A6NH13 148 aa9.13□□□□□ -0.95
RNF4-212ENST00000509258 LRRC30A6NM36 301 aa9.13□□□□□ -0.95
RNF4-212ENST00000509258 CEACAM18A8MTB9 384 aa9.13□□□□□ -0.95
RNF4-212ENST00000509258 A8MXK9 166 aa9.13□□□□□ -0.95
RNF4-212ENST00000509258 DCTN3O75935 186 aa9.13□□□□□ -0.95
RNF4-212ENST00000509258 ZNF12P17014 697 aa9.13□□□□□ -0.95
RNF4-212ENST00000509258 PRTN3P24158 256 aa9.13□□□□□ -0.95
RNF4-212ENST00000509258 SRP9P49458 86 aaKnown RBP9.13□□□□□ -0.95
RNF4-212ENST00000509258 PAX2Q02962 417 aa9.13□□□□□ -0.95
RNF4-212ENST00000509258 MAB21L1Q13394 359 aa9.13□□□□□ -0.95
RNF4-212ENST00000509258 CRMP1Q14194 572 aa9.13□□□□□ -0.95
RNF4-212ENST00000509258 MOGAT3Q86VF5 341 aa9.13□□□□□ -0.95
RNF4-212ENST00000509258 BCL6BQ8N143 479 aaPredicted RBP9.13□□□□□ -0.95
RNF4-212ENST00000509258 IQCF1Q8N6M8 205 aa9.13□□□□□ -0.95
RNF4-212ENST00000509258 ATG16L2Q8NAA4 619 aa9.13□□□□□ -0.95
RNF4-212ENST00000509258 ZNF511Q8NB15 262 aa9.13□□□□□ -0.95
RNF4-212ENST00000509258 AQP11Q8NBQ7 271 aa9.13□□□□□ -0.95
RNF4-212ENST00000509258 OR2AE1Q8NHA4 323 aa9.13□□□□□ -0.95
RNF4-212ENST00000509258 SLC25A28Q96A46 364 aa9.13□□□□□ -0.95
RNF4-212ENST00000509258 NSL1Q96IY1 281 aa9.13□□□□□ -0.95
RNF4-212ENST00000509258 PITX2Q99697 317 aa9.13□□□□□ -0.95
RNF4-212ENST00000509258 NIPSNAP1Q9BPW8 284 aa9.13□□□□□ -0.95
RNF4-212ENST00000509258 HCAR1Q9BXC0 346 aa9.13□□□□□ -0.95
RNF4-212ENST00000509258 NMNAT2Q9BZQ4 307 aa9.13□□□□□ -0.95
RNF4-212ENST00000509258 MS4A7Q9GZW8 240 aaPredicted RBP9.13□□□□□ -0.95
RNF4-212ENST00000509258 MED20Q9H944 212 aa9.13□□□□□ -0.95
RNF4-212ENST00000509258 IL20Q9NYY1 176 aa9.13□□□□□ -0.95
RNF4-212ENST00000509258 TMCC3Q9ULS5 477 aa9.13□□□□□ -0.95
RNF4-212ENST00000509258 INSIG2Q9Y5U4 225 aa9.13□□□□□ -0.95
RNF4-212ENST00000509258 COMMD3-BMI1R4GMX3 469 aa9.13□□□□□ -0.95
RNF4-212ENST00000509258 CMYA5Q8N3K9 4069 aa9.12□□□□□ -0.95
RNF4-212ENST00000509258 IDH3BO43837 385 aa9.12□□□□□ -0.95
RNF4-212ENST00000509258 FCN3O75636 299 aa9.12□□□□□ -0.95
RNF4-212ENST00000509258 HLA-DQA2P01906 255 aa9.12□□□□□ -0.95
RNF4-212ENST00000509258 SLC2A1P11166 492 aa9.12□□□□□ -0.95
RNF4-212ENST00000509258 IRF2P14316 349 aa9.12□□□□□ -0.95
RNF4-212ENST00000509258 RPS2P15880 293 aaKnown RBP9.12□□□□□ -0.95
RNF4-212ENST00000509258 SLC6A9P48067 706 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms