RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 ZNF649Q9BS31 505 aa16.64■□□□□ 0.25
PCOLCE-208ENST00000487172 MRPL37Q9BZE1 423 aaKnown RBP16.64■□□□□ 0.25
PCOLCE-208ENST00000487172 ST6GALNAC2Q9UJ37 374 aa16.64■□□□□ 0.25
PCOLCE-208ENST00000487172 IKZF2Q9UKS7 526 aa16.64■□□□□ 0.25
PCOLCE-208ENST00000487172 LAMP3Q9UQV4 416 aa16.64■□□□□ 0.25
PCOLCE-208ENST00000487172 EFCAB10A6NFE3 127 aa16.63■□□□□ 0.25
PCOLCE-208ENST00000487172 METTL15A6NJ78 407 aa16.63■□□□□ 0.25
PCOLCE-208ENST00000487172 IGHV3-13P01766 116 aa16.63■□□□□ 0.25
PCOLCE-208ENST00000487172 KRT8P05787 483 aa16.63■□□□□ 0.25
PCOLCE-208ENST00000487172 CCDC159P0C7I6 412 aa16.63■□□□□ 0.25
PCOLCE-208ENST00000487172 CD53P19397 219 aa16.63■□□□□ 0.25
PCOLCE-208ENST00000487172 GCH1P30793 250 aa16.63■□□□□ 0.25
PCOLCE-208ENST00000487172 ZNF121P58317 390 aaPredicted RBP16.63■□□□□ 0.25
PCOLCE-208ENST00000487172 SELENOVP59797 346 aa16.63■□□□□ 0.25
PCOLCE-208ENST00000487172 CDONQ4KMG0 1287 aa16.63■□□□□ 0.25
PCOLCE-208ENST00000487172 BPIFB6Q8NFQ5 453 aa16.63■□□□□ 0.25
PCOLCE-208ENST00000487172 OR52H1Q8NGJ2 320 aa16.63■□□□□ 0.25
PCOLCE-208ENST00000487172 KLF14Q8TD94 323 aaPredicted RBP16.63■□□□□ 0.25
PCOLCE-208ENST00000487172 SNX33Q8WV41 574 aa16.63■□□□□ 0.25
PCOLCE-208ENST00000487172 NINJ1Q92982 152 aa16.63■□□□□ 0.25
PCOLCE-208ENST00000487172 MRPL48Q96GC5 212 aaKnown RBP16.63■□□□□ 0.25
PCOLCE-208ENST00000487172 TTTY10Q9BZA0 68 aa16.63■□□□□ 0.25
PCOLCE-208ENST00000487172 POFUT1Q9H488 388 aa16.63■□□□□ 0.25
PCOLCE-208ENST00000487172 FKBP14Q9NWM8 211 aa16.63■□□□□ 0.25
PCOLCE-208ENST00000487172 ERVK13-1Q9NX77 482 aa16.63■□□□□ 0.25
PCOLCE-208ENST00000487172 PSORS1C1Q9UIG5 152 aa16.63■□□□□ 0.25
PCOLCE-208ENST00000487172 OVOL3O00110 214 aa16.62■□□□□ 0.25
PCOLCE-208ENST00000487172 SLC1A7O00341 560 aa16.62■□□□□ 0.25
PCOLCE-208ENST00000487172 MAGEB4O15481 346 aaPredicted RBP16.62■□□□□ 0.25
PCOLCE-208ENST00000487172 XPNPEP2O43895 674 aa16.62■□□□□ 0.25
PCOLCE-208ENST00000487172 FAM20BO75063 409 aa16.62■□□□□ 0.25
PCOLCE-208ENST00000487172 SRSF10O75494 262 aaKnown RBP16.62■□□□□ 0.25
PCOLCE-208ENST00000487172 ATE1O95260 518 aa16.62■□□□□ 0.25
PCOLCE-208ENST00000487172 RAC2P15153 192 aa16.62■□□□□ 0.25
PCOLCE-208ENST00000487172 MMP16P51512 607 aa16.62■□□□□ 0.25
PCOLCE-208ENST00000487172 MALLQ13021 153 aa16.62■□□□□ 0.25
PCOLCE-208ENST00000487172 GALEQ14376 348 aa16.62■□□□□ 0.25
PCOLCE-208ENST00000487172 MOGQ16653 247 aa16.62■□□□□ 0.25
PCOLCE-208ENST00000487172 ZNF829Q3KNS6 432 aaPredicted RBP16.62■□□□□ 0.25
PCOLCE-208ENST00000487172 SNAI3Q3KNW1 292 aa16.62■□□□□ 0.25
PCOLCE-208ENST00000487172 FBXW12Q6X9E4 464 aa16.62■□□□□ 0.25
PCOLCE-208ENST00000487172 TMEM80Q96HE8 168 aa16.62■□□□□ 0.25
PCOLCE-208ENST00000487172 CNBD2Q96M20 576 aa16.62■□□□□ 0.25
PCOLCE-208ENST00000487172 FAM206AQ9NX38 181 aa16.62■□□□□ 0.25
PCOLCE-208ENST00000487172 DIMT1Q9UNQ2 313 aaKnown RBP16.62■□□□□ 0.25
PCOLCE-208ENST00000487172 TMEM269A0A1B0GVZ9 245 aa16.61■□□□□ 0.25
PCOLCE-208ENST00000487172 XRCC2O43543 280 aa16.61■□□□□ 0.25
PCOLCE-208ENST00000487172 CLPTM1O96005 669 aa16.61■□□□□ 0.25
PCOLCE-208ENST00000487172 ANXA2P07355 339 aaKnown RBP16.61■□□□□ 0.25
PCOLCE-208ENST00000487172 TACSTD2P09758 323 aa16.61■□□□□ 0.25
PCOLCE-208ENST00000487172 SLC2A1P11166 492 aa16.61■□□□□ 0.25
PCOLCE-208ENST00000487172 BMP4P12644 408 aa16.61■□□□□ 0.25
PCOLCE-208ENST00000487172 KLF3P57682 345 aaPredicted RBP16.61■□□□□ 0.25
PCOLCE-208ENST00000487172 ACTA2P62736 377 aa16.61■□□□□ 0.25
PCOLCE-208ENST00000487172 ACTG2P63267 376 aa16.61■□□□□ 0.25
PCOLCE-208ENST00000487172 SPATA46Q5T0L3 261 aa16.61■□□□□ 0.25
PCOLCE-208ENST00000487172 LIPNQ5VXI9 398 aa16.61■□□□□ 0.25
PCOLCE-208ENST00000487172 LHFPL3Q86UP9 236 aa16.61■□□□□ 0.25
PCOLCE-208ENST00000487172 LRP11Q86VZ4 500 aa16.61■□□□□ 0.25
PCOLCE-208ENST00000487172 SYS1Q8N2H4 156 aa16.61■□□□□ 0.25
PCOLCE-208ENST00000487172 YIPF7Q8N8F6 280 aa16.61■□□□□ 0.25
PCOLCE-208ENST00000487172 HAVCR1Q96D42 359 aa16.61■□□□□ 0.25
PCOLCE-208ENST00000487172 CCL19Q99731 98 aa16.61■□□□□ 0.25
PCOLCE-208ENST00000487172 RHNO1Q9BSD3 238 aa16.61■□□□□ 0.25
PCOLCE-208ENST00000487172 ALG8Q9BVK2 526 aa16.61■□□□□ 0.25
PCOLCE-208ENST00000487172 SCN3BQ9NY72 215 aa16.61■□□□□ 0.25
PCOLCE-208ENST00000487172 PTTG3PQ9NZH4 202 aa16.61■□□□□ 0.25
PCOLCE-208ENST00000487172 DUSP13Q9UII6 198 aa16.61■□□□□ 0.25
PCOLCE-208ENST00000487172 R4GMQ9 66 aa16.61■□□□□ 0.25
PCOLCE-208ENST00000487172 ASH1LQ9NR48 2969 aaKnown RBP16.61■□□□□ 0.25
PCOLCE-208ENST00000487172 UNC79Q9P2D8 2635 aa16.6■□□□□ 0.25
PCOLCE-208ENST00000487172 LIMS3P0CW19 117 aa16.6■□□□□ 0.25
PCOLCE-208ENST00000487172 LIMS4P0CW20 117 aa16.6■□□□□ 0.25
PCOLCE-208ENST00000487172 KITLGP21583 273 aa16.6■□□□□ 0.25
PCOLCE-208ENST00000487172 ANOS1P23352 680 aa16.6■□□□□ 0.25
PCOLCE-208ENST00000487172 DNASE1P24855 282 aa16.6■□□□□ 0.25
PCOLCE-208ENST00000487172 MPV17P39210 176 aa16.6■□□□□ 0.25
PCOLCE-208ENST00000487172 ST3GAL4Q11206 333 aa16.6■□□□□ 0.25
PCOLCE-208ENST00000487172 PSG7Q13046 419 aa16.6■□□□□ 0.25
PCOLCE-208ENST00000487172 GK2Q14410 553 aaPredicted RBP16.6■□□□□ 0.25
PCOLCE-208ENST00000487172 FAM57BQ71RH2 274 aa16.6■□□□□ 0.25
PCOLCE-208ENST00000487172 FAM220AQ7Z4H9 259 aa16.6■□□□□ 0.25
PCOLCE-208ENST00000487172 SPSB4Q96A44 273 aa16.6■□□□□ 0.25
PCOLCE-208ENST00000487172 CMBLQ96DG6 245 aa16.6■□□□□ 0.25
PCOLCE-208ENST00000487172 PGAM5Q96HS1 289 aa16.6■□□□□ 0.25
PCOLCE-208ENST00000487172 SYT3Q9BQG1 590 aa16.6■□□□□ 0.25
PCOLCE-208ENST00000487172 REPIN1Q9BWE0 567 aaKnown RBP16.6■□□□□ 0.25
PCOLCE-208ENST00000487172 OR10A2Q9H208 303 aa16.6■□□□□ 0.25
PCOLCE-208ENST00000487172 RGCCQ9H4X1 137 aa16.6■□□□□ 0.25
PCOLCE-208ENST00000487172 OPA3Q9H6K4 179 aa16.6■□□□□ 0.25
PCOLCE-208ENST00000487172 MOB1AQ9H8S9 216 aa16.6■□□□□ 0.25
PCOLCE-208ENST00000487172 ZNF319Q9P2F9 582 aa16.6■□□□□ 0.25
PCOLCE-208ENST00000487172 FZR1Q9UM11 496 aa16.6■□□□□ 0.25
PCOLCE-208ENST00000487172 PLEKHA6Q9Y2H5 1048 aa16.6■□□□□ 0.25
PCOLCE-208ENST00000487172 EXOSC1Q9Y3B2 195 aaKnown RBP16.6■□□□□ 0.25
PCOLCE-208ENST00000487172 TPRKBQ9Y3C4 175 aa16.6■□□□□ 0.25
PCOLCE-208ENST00000487172 PMF1-BGLAPU3KQ54 211 aa16.6■□□□□ 0.25
PCOLCE-208ENST00000487172 HRNRQ86YZ3 2850 aaPredicted RBP16.6■□□□□ 0.25
PCOLCE-208ENST00000487172 CRYBG3Q68DQ2 2970 aa16.6■□□□□ 0.25
PCOLCE-208ENST00000487172 CELSR2Q9HCU4 2923 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms