RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 COMMD7Q86VX2 200 aa14.93□□□□□ -0.02
NUP50-203ENST00000407019 CCDC28AQ8IWP9 274 aa14.93□□□□□ -0.02
NUP50-203ENST00000407019 MYOZ1Q9NP98 299 aaPredicted RBP14.93□□□□□ -0.02
NUP50-203ENST00000407019 ASH2LQ9UBL3 628 aa14.93□□□□□ -0.02
NUP50-203ENST00000407019 FARSAQ9Y285 508 aaKnown RBP14.93□□□□□ -0.02
NUP50-203ENST00000407019 IGHV1-45A0A0A0MS14 117 aa14.92□□□□□ -0.02
NUP50-203ENST00000407019 LOC102725191A0A1B0GVB3 256 aa14.92□□□□□ -0.02
NUP50-203ENST00000407019 TUBAL3A6NHL2 446 aa14.92□□□□□ -0.02
NUP50-203ENST00000407019 DISC1C4P0D8 188 aa14.92□□□□□ -0.02
NUP50-203ENST00000407019 SULT2B1O00204 365 aa14.92□□□□□ -0.02
NUP50-203ENST00000407019 ARPC5O15511 151 aa14.92□□□□□ -0.02
NUP50-203ENST00000407019 GDF9O60383 454 aa14.92□□□□□ -0.02
NUP50-203ENST00000407019 CELA2AP08217 269 aa14.92□□□□□ -0.02
NUP50-203ENST00000407019 QDPRP09417 244 aa14.92□□□□□ -0.02
NUP50-203ENST00000407019 VSIG8P0DPA2 414 aa14.92□□□□□ -0.02
NUP50-203ENST00000407019 HIST3H3Q16695 136 aa14.92□□□□□ -0.02
NUP50-203ENST00000407019 AWAT2Q6E213 333 aa14.92□□□□□ -0.02
NUP50-203ENST00000407019 COMMD2Q86X83 199 aa14.92□□□□□ -0.02
NUP50-203ENST00000407019 UBALD2Q8IYN6 164 aa14.92□□□□□ -0.02
NUP50-203ENST00000407019 CHST4Q8NCG5 386 aa14.92□□□□□ -0.02
NUP50-203ENST00000407019 PCNPQ8WW12 178 aaKnown RBP14.92□□□□□ -0.02
NUP50-203ENST00000407019 GSX2Q9BZM3 304 aa14.92□□□□□ -0.02
NUP50-203ENST00000407019 ASCC3Q8N3C0 2202 aaKnown RBP14.92□□□□□ -0.02
NUP50-203ENST00000407019 SPEGQ15772 3267 aa14.92□□□□□ -0.02
NUP50-203ENST00000407019 FXYD6-FXYD2A0A087WZ82 144 aa14.91□□□□□ -0.02
NUP50-203ENST00000407019 A0A087WZY1 265 aa14.91□□□□□ -0.02
NUP50-203ENST00000407019 KLK2P20151 261 aa14.91□□□□□ -0.02
NUP50-203ENST00000407019 ZNF121P58317 390 aaPredicted RBP14.91□□□□□ -0.02
NUP50-203ENST00000407019 SCGB2B2Q4G0G5 96 aa14.91□□□□□ -0.02
NUP50-203ENST00000407019 ATPAF1Q5TC12 328 aaPredicted RBP14.91□□□□□ -0.02
NUP50-203ENST00000407019 OPN5Q6U736 354 aa14.91□□□□□ -0.02
NUP50-203ENST00000407019 ABHD12BQ7Z5M8 362 aaPredicted RBP14.91□□□□□ -0.02
NUP50-203ENST00000407019 WDR5BQ86VZ2 330 aa14.91□□□□□ -0.02
NUP50-203ENST00000407019 C12orf45Q8N5I9 185 aaPredicted RBP14.91□□□□□ -0.02
NUP50-203ENST00000407019 OR4S1Q8NGB4 309 aa14.91□□□□□ -0.02
NUP50-203ENST00000407019 OR8B12Q8NGG6 310 aa14.91□□□□□ -0.02
NUP50-203ENST00000407019 EDAQ92838 391 aa14.91□□□□□ -0.02
NUP50-203ENST00000407019 CMBLQ96DG6 245 aa14.91□□□□□ -0.02
NUP50-203ENST00000407019 SLC6A7Q99884 636 aa14.91□□□□□ -0.02
NUP50-203ENST00000407019 EDEM2Q9BV94 578 aa14.91□□□□□ -0.02
NUP50-203ENST00000407019 FXYD6Q9H0Q3 95 aa14.91□□□□□ -0.02
NUP50-203ENST00000407019 FBLN5Q9UBX5 448 aa14.91□□□□□ -0.02
NUP50-203ENST00000407019 RALGAPA1Q6GYQ0 2036 aa14.91□□□□□ -0.02
NUP50-203ENST00000407019 VCANP13611 3396 aa14.91□□□□□ -0.02
NUP50-203ENST00000407019 D6RAR5 112 aa14.91□□□□□ -0.02
NUP50-203ENST00000407019 TLX3O43711 291 aaPredicted RBP14.91□□□□□ -0.02
NUP50-203ENST00000407019 KLK3P07288 261 aaPredicted RBP14.91□□□□□ -0.02
NUP50-203ENST00000407019 SLC2A1P11166 492 aa14.91□□□□□ -0.02
NUP50-203ENST00000407019 S100A11P31949 105 aa14.91□□□□□ -0.02
NUP50-203ENST00000407019 ZNF93P35789 620 aaPredicted RBP14.91□□□□□ -0.02
NUP50-203ENST00000407019 CX3CR1P49238 355 aa14.91□□□□□ -0.02
NUP50-203ENST00000407019 GMFBP60983 142 aa14.91□□□□□ -0.02
NUP50-203ENST00000407019 EXT1Q16394 746 aa14.91□□□□□ -0.02
NUP50-203ENST00000407019 CDNFQ49AH0 187 aa14.91□□□□□ -0.02
NUP50-203ENST00000407019 RNASE10Q5GAN6 216 aaKnown RBP14.91□□□□□ -0.02
NUP50-203ENST00000407019 TMPPEQ6ZT21 453 aa14.91□□□□□ -0.02
NUP50-203ENST00000407019 GTPBP8Q8N3Z3 284 aaPredicted RBP14.91□□□□□ -0.02
NUP50-203ENST00000407019 OR13C8Q8NGS7 320 aa14.91□□□□□ -0.02
NUP50-203ENST00000407019 MR1Q95460 341 aa14.91□□□□□ -0.02
NUP50-203ENST00000407019 PRRT1Q99946 306 aa14.91□□□□□ -0.02
NUP50-203ENST00000407019 ZNF700Q9H0M5 742 aa14.91□□□□□ -0.02
NUP50-203ENST00000407019 PNRC2Q9NPJ4 139 aaKnown RBP14.91□□□□□ -0.02
NUP50-203ENST00000407019 SLC2A8Q9NY64 477 aa14.91□□□□□ -0.02
NUP50-203ENST00000407019 PTRH2Q9Y3E5 179 aaKnown RBP14.91□□□□□ -0.02
NUP50-203ENST00000407019 RER1O15258 196 aa14.9□□□□□ -0.02
NUP50-203ENST00000407019 CSN2P05814 226 aa14.9□□□□□ -0.02
NUP50-203ENST00000407019 UMODP07911 640 aa14.9□□□□□ -0.02
NUP50-203ENST00000407019 AP2S1P53680 142 aaPredicted RBP14.9□□□□□ -0.02
NUP50-203ENST00000407019 CLDN17P56750 224 aa14.9□□□□□ -0.02
NUP50-203ENST00000407019 CAMK2BQ13554 666 aa14.9□□□□□ -0.02
NUP50-203ENST00000407019 TMEM81Q6P7N7 255 aa14.9□□□□□ -0.02
NUP50-203ENST00000407019 TMUB2Q71RG4 321 aa14.9□□□□□ -0.02
NUP50-203ENST00000407019 OR2I1PQ8NGU4 316 aa14.9□□□□□ -0.02
NUP50-203ENST00000407019 NUDT16L1Q9BRJ7 211 aaKnown RBP14.9□□□□□ -0.02
NUP50-203ENST00000407019 GPR84Q9NQS5 396 aa14.9□□□□□ -0.02
NUP50-203ENST00000407019 KCNN3Q9UGI6 736 aa14.9□□□□□ -0.02
NUP50-203ENST00000407019 TNRC6BQ9UPQ9 1833 aaKnown RBP14.9□□□□□ -0.02
NUP50-203ENST00000407019 TMEM14DPA8MWL7 114 aa14.89□□□□□ -0.03
NUP50-203ENST00000407019 RP2O75695 350 aa14.89□□□□□ -0.03
NUP50-203ENST00000407019 COX6A1P12074 109 aa14.89□□□□□ -0.03
NUP50-203ENST00000407019 NR2C1P13056 603 aa14.89□□□□□ -0.03
NUP50-203ENST00000407019 ABOP16442 354 aa14.89□□□□□ -0.03
NUP50-203ENST00000407019 GSK3AP49840 483 aa14.89□□□□□ -0.03
NUP50-203ENST00000407019 GRB2P62993 217 aaKnown RBP14.89□□□□□ -0.03
NUP50-203ENST00000407019 HLXQ14774 488 aaPredicted RBP14.89□□□□□ -0.03
NUP50-203ENST00000407019 ZMYND11Q15326 602 aa14.89□□□□□ -0.03
NUP50-203ENST00000407019 NKPD1Q17RQ9 610 aa14.89□□□□□ -0.03
NUP50-203ENST00000407019 NHLRC3Q5JS37 347 aa14.89□□□□□ -0.03
NUP50-203ENST00000407019 B3GNTL1Q67FW5 361 aaPredicted RBP14.89□□□□□ -0.03
NUP50-203ENST00000407019 PGAP1Q75T13 922 aa14.89□□□□□ -0.03
NUP50-203ENST00000407019 ANGPTL5Q86XS5 388 aa14.89□□□□□ -0.03
NUP50-203ENST00000407019 NUDCD2Q8WVJ2 157 aa14.89□□□□□ -0.03
NUP50-203ENST00000407019 IMMP1LQ96LU5 166 aa14.89□□□□□ -0.03
NUP50-203ENST00000407019 KIF25Q9UIL4 384 aa14.89□□□□□ -0.03
NUP50-203ENST00000407019 MYO15AQ9UKN7 3530 aa14.89□□□□□ -0.03
NUP50-203ENST00000407019 C9J4A7 227 aa14.89□□□□□ -0.03
NUP50-203ENST00000407019 CRYZL1O95825 349 aa14.89□□□□□ -0.03
NUP50-203ENST00000407019 RRASP10301 218 aa14.89□□□□□ -0.03
NUP50-203ENST00000407019 PPP3CBP16298 524 aa14.89□□□□□ -0.03
NUP50-203ENST00000407019 MPZP25189 248 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms