RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 SLC16A12Q6ZSM3 486 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 TCF23Q7RTU1 214 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 OR2W3Q7Z3T1 314 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 AMIGO3Q86WK7 504 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 TEX29Q8N6K0 151 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 OR8D4Q8NGM9 314 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 TMED6Q8WW62 240 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 CDX2Q99626 313 aaPredicted RBP4.44□□□□□ -1.7
CSMD3-201ENST00000297405 CHST11Q9NPF2 352 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 MRPS17Q9Y2R5 130 aaKnown RBP4.44□□□□□ -1.7
CSMD3-201ENST00000297405 LIPGQ9Y5X9 500 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 KBTBD11-OT1A0A1B0GTJ5 212 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 ACRV1P26436 265 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 TMEM267Q0VDI3 215 aaPredicted RBP4.44□□□□□ -1.7
CSMD3-201ENST00000297405 GRB7Q14451 532 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 PLPPR5Q32ZL2 321 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 OR7E24Q6IFN5 339 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 C20orf196Q8IYI0 205 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 UTP4Q969X6 686 aaKnown RBP4.44□□□□□ -1.7
CSMD3-201ENST00000297405 SNX22Q96L94 193 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 C16orf70Q9BSU1 422 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 ARNT2Q9HBZ2 717 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 A4GALTQ9NPC4 353 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 A0A1B0GV50 99 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 FDXRP22570 491 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 OR1E2P47887 323 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 PSMB2P49721 201 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 DIO3P55073 304 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 PDE7AQ13946 482 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 OR2A2Q6IF42 318 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 PLXDC2Q6UX71 529 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 TMEM102Q8N9M5 508 aaPredicted RBP4.44□□□□□ -1.7
CSMD3-201ENST00000297405 CPEB3Q8NE35 698 aaKnown RBP4.44□□□□□ -1.7
CSMD3-201ENST00000297405 PP6455Q8WZ26 134 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 GHSRQ92847 366 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 PELI2Q9HAT8 420 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 TMEM189-UBE2V1I3L0A0 370 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 PEX12O00623 359 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 PRKRAO75569 313 aaKnown RBP4.44□□□□□ -1.7
CSMD3-201ENST00000297405 HIST1H1EP10412 219 aaKnown RBP4.44□□□□□ -1.7
CSMD3-201ENST00000297405 KIR2DS2P43631 304 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 GABRA4P48169 554 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 PAPPA-AS1Q5QFB9 102 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 KMT5CQ86Y97 462 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 H1FOOQ8IZA3 346 aaPredicted RBP4.44□□□□□ -1.7
CSMD3-201ENST00000297405 DCAF4L2Q8NA75 395 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 ST6GALNAC5Q9BVH7 336 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 SPTBN4Q9H254 2564 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 RBFOX3A6NFN3 312 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 FBLL1A6NHQ2 334 aaKnown RBP4.44□□□□□ -1.7
CSMD3-201ENST00000297405 G3V2L1 256 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 NDUFB6O95139 128 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 ACAA1P09110 424 aaPredicted RBP4.44□□□□□ -1.7
CSMD3-201ENST00000297405 ABOP16442 354 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 MEOX1P50221 254 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 MANEAQ5SRI9 462 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 PIM3Q86V86 326 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 Q8IYB0 196 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 UMODL1-AS1Q8N2C9 162 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 GPR137CQ8N3F9 429 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 FADS6Q8N9I5 356 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 POC1AQ8NBT0 407 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 TMEM19Q96HH6 336 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 SLC23A2Q9UGH3 650 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 VAX2Q9UIW0 290 aa4.44□□□□□ -1.7
CSMD3-201ENST00000297405 CICQ96RK0 1608 aaPredicted RBP4.44□□□□□ -1.7
CSMD3-201ENST00000297405 VNN1O95497 513 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 MMP9P14780 707 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 MPGP29372 298 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 GPR4P46093 362 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 CDX1P47902 265 aaPredicted RBP4.43□□□□□ -1.7
CSMD3-201ENST00000297405 SCARF1Q14162 830 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 ZNF542PQ5EBM4 170 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 DOLPP1Q86YN1 238 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 TMEM251Q8N6I4 163 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 ZFYVE21Q9BQ24 234 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 ADGRL4Q9HBW9 690 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 VDAC3Q9Y277 283 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 MMACHCQ9Y4U1 282 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 ENTPD2Q9Y5L3 495 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 AQP7O14520 342 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 TSPAN6O43657 245 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 FAM87AP0C7U9 286 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 MS4A2Q01362 244 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 IHHQ14623 411 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 OR1L1Q8NH94 360 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 SIGMAR1Q99720 223 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 ULBP3Q9BZM4 244 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 ZNF160Q9HCG1 818 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 NGBQ9NPG2 151 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 POLDIP2Q9Y2S7 368 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 CAMTA1Q9Y6Y1 1673 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 ZNF17P17021 662 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 RUNX2Q13950 521 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 IGFBP7Q16270 282 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 FAM209AQ5JX71 171 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 AADACL3Q5VUY0 350 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 CBARPQ8N350 705 aaPredicted RBP4.43□□□□□ -1.7
CSMD3-201ENST00000297405 C4orf32Q8N8J7 132 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 TAPBPO15533 448 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms