RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 OR8U1Q8NH10 309 aa11.54□□□□□ -0.56
SFSWAP-209ENST00000540469 ADAMTS17Q8TE56 1095 aa11.54□□□□□ -0.56
SFSWAP-209ENST00000540469 HHLA2Q9UM44 414 aa11.54□□□□□ -0.56
SFSWAP-209ENST00000540469 MRPS23Q9Y3D9 190 aaKnown RBP11.54□□□□□ -0.56
SFSWAP-209ENST00000540469 OBSL1O75147 1896 aa11.54□□□□□ -0.56
SFSWAP-209ENST00000540469 NME2P1O60361 137 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 SCGB1D2O95969 90 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 PPM1AP35813 382 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 DEFB103AP81534 67 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 SRSF5Q13243 272 aaKnown RBP11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 KIAA0141Q14154 515 aaPredicted RBP11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 ISXQ2M1V0 245 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 CDPF1Q6NVV7 123 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 PRSS54Q6PEW0 395 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 DGAT2L6Q6ZPD8 337 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 ZNF679Q8IYX0 411 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 OR13C9Q8NGT0 318 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 MEGF10Q96KG7 1140 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 TSPAN32Q96QS1 320 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 G6PC3Q9BUM1 346 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 NMES1Q9C002 83 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 CENPMQ9NSP4 180 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 HEBP2Q9Y5Z4 205 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 C9JQL5 133 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 H0YGG7 62 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 IL2RAP01589 272 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 HLA-GP17693 338 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 CLDN6P56747 220 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 ARF3P61204 181 aaPredicted RBP11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 MFGE8Q08431 387 aaPredicted RBP11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 SSX9Q7RTT3 188 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 ASB5Q8WWX0 329 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 HIF3AQ9Y2N7 669 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 KIF26BQ2KJY2 2108 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 YIF1AO95070 293 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 OR8U8P0C7N1 319 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 CCL5P13501 91 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 GSK3AP49840 483 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 TMEM244Q5VVB8 128 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 LCN10Q6JVE6 187 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 LINC00114Q6XXX2 140 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 COX15Q7KZN9 410 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 ST7LQ8TDW4 575 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 ASB17Q8WXJ9 295 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 OR2A5Q96R48 311 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 TEX101Q9BY14 249 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 AMDHD2Q9Y303 409 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 MEMO1Q9Y316 297 aa11.53□□□□□ -0.56
SFSWAP-209ENST00000540469 A0A1W2PPE2 198 aa11.52□□□□□ -0.56
SFSWAP-209ENST00000540469 APBB3O95704 486 aa11.52□□□□□ -0.56
SFSWAP-209ENST00000540469 ACTR1BP42025 376 aa11.52□□□□□ -0.56
SFSWAP-209ENST00000540469 NDUFA6P56556 154 aa11.52□□□□□ -0.56
SFSWAP-209ENST00000540469 ACTR1AP61163 376 aa11.52□□□□□ -0.56
SFSWAP-209ENST00000540469 TOMM20Q15388 145 aa11.52□□□□□ -0.56
SFSWAP-209ENST00000540469 HMGN3Q15651 99 aa11.52□□□□□ -0.56
SFSWAP-209ENST00000540469 PNLIPRP3Q17RR3 467 aa11.52□□□□□ -0.56
SFSWAP-209ENST00000540469 ZNF529Q6P280 563 aa11.52□□□□□ -0.56
SFSWAP-209ENST00000540469 COMMD2Q86X83 199 aa11.52□□□□□ -0.56
SFSWAP-209ENST00000540469 EXD3Q8N9H8 876 aa11.52□□□□□ -0.56
SFSWAP-209ENST00000540469 OR4D6Q8NGJ1 314 aa11.52□□□□□ -0.56
SFSWAP-209ENST00000540469 NT5CQ8TCD5 201 aa11.52□□□□□ -0.56
SFSWAP-209ENST00000540469 OCSTAMPQ9BR26 566 aa11.52□□□□□ -0.56
SFSWAP-209ENST00000540469 GGACTQ9BVM4 153 aa11.52□□□□□ -0.56
SFSWAP-209ENST00000540469 RAB33BQ9H082 229 aa11.52□□□□□ -0.56
SFSWAP-209ENST00000540469 SEBOXQ9HB31 216 aaPredicted RBP11.52□□□□□ -0.56
SFSWAP-209ENST00000540469 MMP25Q9NPA2 562 aa11.52□□□□□ -0.56
SFSWAP-209ENST00000540469 UFSP2Q9NUQ7 469 aa11.52□□□□□ -0.56
SFSWAP-209ENST00000540469 DTX4Q9Y2E6 619 aa11.52□□□□□ -0.56
SFSWAP-209ENST00000540469 C2orf74A8MZ97 194 aa11.52□□□□□ -0.57
SFSWAP-209ENST00000540469 HRKO00198 91 aa11.52□□□□□ -0.57
SFSWAP-209ENST00000540469 GPR37O15354 613 aa11.52□□□□□ -0.57
SFSWAP-209ENST00000540469 IFNA2P01563 188 aa11.52□□□□□ -0.57
SFSWAP-209ENST00000540469 PNMTP11086 282 aa11.52□□□□□ -0.57
SFSWAP-209ENST00000540469 ACKR3P25106 362 aa11.52□□□□□ -0.57
SFSWAP-209ENST00000540469 OR3A2P47893 321 aa11.52□□□□□ -0.57
SFSWAP-209ENST00000540469 ARFRP1Q13795 201 aa11.52□□□□□ -0.57
SFSWAP-209ENST00000540469 TMEM128Q5BJH2 165 aa11.52□□□□□ -0.57
SFSWAP-209ENST00000540469 TMEM184AQ6ZMB5 413 aa11.52□□□□□ -0.57
SFSWAP-209ENST00000540469 OR14C36Q8NHC7 312 aa11.52□□□□□ -0.57
SFSWAP-209ENST00000540469 ZFYVE21Q9BQ24 234 aa11.52□□□□□ -0.57
SFSWAP-209ENST00000540469 KCNJ16Q9NPI9 418 aa11.52□□□□□ -0.57
SFSWAP-209ENST00000540469 CACFD1Q9UGQ2 172 aa11.52□□□□□ -0.57
SFSWAP-209ENST00000540469 GDF2Q9UK05 429 aaPredicted RBP11.52□□□□□ -0.57
SFSWAP-209ENST00000540469 LOC107986453A0A1B0GWG9 222 aa11.52□□□□□ -0.57
SFSWAP-209ENST00000540469 GPR89AB7ZAQ6 455 aa11.52□□□□□ -0.57
SFSWAP-209ENST00000540469 UMAD1C9J7I0 102 aa11.52□□□□□ -0.57
SFSWAP-209ENST00000540469 KNG1P01042 644 aa11.52□□□□□ -0.57
SFSWAP-209ENST00000540469 CEACAM5P06731 702 aa11.52□□□□□ -0.57
SFSWAP-209ENST00000540469 GPR89BP0CG08 455 aa11.52□□□□□ -0.57
SFSWAP-209ENST00000540469 AGAP20933 346 aa11.52□□□□□ -0.57
SFSWAP-209ENST00000540469 GPX4P36969 197 aaPredicted RBP11.52□□□□□ -0.57
SFSWAP-209ENST00000540469 RPS4XP62701 263 aaKnown RBP11.52□□□□□ -0.57
SFSWAP-209ENST00000540469 LHX8Q68G74 356 aa11.52□□□□□ -0.57
SFSWAP-209ENST00000540469 WBP2NLQ6ICG8 309 aa11.52□□□□□ -0.57
SFSWAP-209ENST00000540469 FAHD2BQ6P2I3 314 aaPredicted RBP11.52□□□□□ -0.57
SFSWAP-209ENST00000540469 STX12Q86Y82 276 aa11.52□□□□□ -0.57
SFSWAP-209ENST00000540469 PAQR4Q8N4S7 273 aaPredicted RBP11.52□□□□□ -0.57
SFSWAP-209ENST00000540469 RNF128Q8TEB7 428 aa11.52□□□□□ -0.57
SFSWAP-209ENST00000540469 KTI12Q96EK9 354 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms