RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 OPN4Q9UHM6 478 aa11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 NUP50Q9UKX7 468 aa11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 IGLV1-36A0A0B4J1U3 117 aa11.45□□□□□ -0.58
CCHCR1-227ENST00000508852 F5H0A9 414 aaPredicted RBP11.45□□□□□ -0.58
CCHCR1-227ENST00000508852 PPP1R3DO95685 299 aa11.45□□□□□ -0.58
CCHCR1-227ENST00000508852 ZNF12P17014 697 aa11.45□□□□□ -0.58
CCHCR1-227ENST00000508852 TPTEP56180 551 aa11.45□□□□□ -0.58
CCHCR1-227ENST00000508852 TSPAN31Q12999 210 aa11.45□□□□□ -0.58
CCHCR1-227ENST00000508852 SEC23BQ15437 767 aa11.45□□□□□ -0.58
CCHCR1-227ENST00000508852 KCNJ8Q15842 424 aa11.45□□□□□ -0.58
CCHCR1-227ENST00000508852 C16orf89Q6UX73 402 aa11.45□□□□□ -0.58
CCHCR1-227ENST00000508852 COLCA1Q6ZS62 124 aa11.45□□□□□ -0.58
CCHCR1-227ENST00000508852 NLRC3Q7RTR2 1065 aa11.45□□□□□ -0.58
CCHCR1-227ENST00000508852 PGAM4Q8N0Y7 254 aa11.45□□□□□ -0.58
CCHCR1-227ENST00000508852 OR52L1Q8NGH7 329 aa11.45□□□□□ -0.58
CCHCR1-227ENST00000508852 OR4C15Q8NGM1 316 aa11.45□□□□□ -0.58
CCHCR1-227ENST00000508852 SPTSSAQ969W0 71 aa11.45□□□□□ -0.58
CCHCR1-227ENST00000508852 MEGF10Q96KG7 1140 aa11.45□□□□□ -0.58
CCHCR1-227ENST00000508852 SIGLEC11Q96RL6 698 aa11.45□□□□□ -0.58
CCHCR1-227ENST00000508852 PITX2Q99697 317 aa11.45□□□□□ -0.58
CCHCR1-227ENST00000508852 SLC6A7Q99884 636 aa11.45□□□□□ -0.58
CCHCR1-227ENST00000508852 ATF6BQ99941 703 aa11.45□□□□□ -0.58
CCHCR1-227ENST00000508852 POFUT1Q9H488 388 aa11.45□□□□□ -0.58
CCHCR1-227ENST00000508852 SRA1Q9HD15 236 aaKnown RBP11.45□□□□□ -0.58
CCHCR1-227ENST00000508852 IL1RAPQ9NPH3 570 aa11.45□□□□□ -0.58
CCHCR1-227ENST00000508852 PTTG3PQ9NZH4 202 aa11.45□□□□□ -0.58
CCHCR1-227ENST00000508852 INSIG2Q9Y5U4 225 aa11.45□□□□□ -0.58
CCHCR1-227ENST00000508852 LHFPL6Q9Y693 200 aa11.45□□□□□ -0.58
CCHCR1-227ENST00000508852 DOCK11Q5JSL3 2073 aa11.44□□□□□ -0.58
CCHCR1-227ENST00000508852 A0A1B0GWJ7 208 aa11.44□□□□□ -0.58
CCHCR1-227ENST00000508852 SNX3O60493 162 aa11.44□□□□□ -0.58
CCHCR1-227ENST00000508852 HLA-DQA2P01906 255 aa11.44□□□□□ -0.58
CCHCR1-227ENST00000508852 SEMG1P04279 462 aa11.44□□□□□ -0.58
CCHCR1-227ENST00000508852 ZNF823P16415 610 aa11.44□□□□□ -0.58
CCHCR1-227ENST00000508852 ZFP36P26651 326 aaKnown RBP11.44□□□□□ -0.58
CCHCR1-227ENST00000508852 GATA4P43694 442 aa11.44□□□□□ -0.58
CCHCR1-227ENST00000508852 MMP16P51512 607 aa11.44□□□□□ -0.58
CCHCR1-227ENST00000508852 RAD23AP54725 363 aa11.44□□□□□ -0.58
CCHCR1-227ENST00000508852 FXYD6P3P58550 94 aa11.44□□□□□ -0.58
CCHCR1-227ENST00000508852 MZT1Q08AG7 82 aa11.44□□□□□ -0.58
CCHCR1-227ENST00000508852 FOXL1Q12952 345 aa11.44□□□□□ -0.58
CCHCR1-227ENST00000508852 ZMYND11Q15326 602 aa11.44□□□□□ -0.58
CCHCR1-227ENST00000508852 OR2T2Q6IF00 324 aa11.44□□□□□ -0.58
CCHCR1-227ENST00000508852 OR5AS1Q8N127 324 aa11.44□□□□□ -0.58
CCHCR1-227ENST00000508852 OR6V1Q8N148 313 aa11.44□□□□□ -0.58
CCHCR1-227ENST00000508852 SLC26A10Q8NG04 563 aa11.44□□□□□ -0.58
CCHCR1-227ENST00000508852 OR11L1Q8NGX0 322 aa11.44□□□□□ -0.58
CCHCR1-227ENST00000508852 SLC7A6Q92536 515 aa11.44□□□□□ -0.58
CCHCR1-227ENST00000508852 NMNAT3Q96T66 252 aa11.44□□□□□ -0.58
CCHCR1-227ENST00000508852 SSBP3Q9BWW4 388 aaPredicted RBP11.44□□□□□ -0.58
CCHCR1-227ENST00000508852 TRIM36Q9NQ86 728 aa11.44□□□□□ -0.58
CCHCR1-227ENST00000508852 CYB5R1Q9UHQ9 305 aa11.44□□□□□ -0.58
CCHCR1-227ENST00000508852 DCTN3O75935 186 aa11.43□□□□□ -0.58
CCHCR1-227ENST00000508852 DIRAS1O95057 198 aa11.43□□□□□ -0.58
CCHCR1-227ENST00000508852 DBHP09172 617 aa11.43□□□□□ -0.58
CCHCR1-227ENST00000508852 WNT2P09544 360 aa11.43□□□□□ -0.58
CCHCR1-227ENST00000508852 RPS2P15880 293 aaKnown RBP11.43□□□□□ -0.58
CCHCR1-227ENST00000508852 HIST1H1CP16403 213 aaKnown RBP11.43□□□□□ -0.58
CCHCR1-227ENST00000508852 RRM2P31350 389 aa11.43□□□□□ -0.58
CCHCR1-227ENST00000508852 MTNR1AP48039 350 aa11.43□□□□□ -0.58
CCHCR1-227ENST00000508852 GSSP48637 474 aa11.43□□□□□ -0.58
CCHCR1-227ENST00000508852 BPIFB3P59826 476 aa11.43□□□□□ -0.58
CCHCR1-227ENST00000508852 GNB2P62879 340 aa11.43□□□□□ -0.58
CCHCR1-227ENST00000508852 HLXQ14774 488 aaPredicted RBP11.43□□□□□ -0.58
CCHCR1-227ENST00000508852 KRTAP27-1Q3LI81 207 aa11.43□□□□□ -0.58
CCHCR1-227ENST00000508852 SPRNQ5BIV9 151 aa11.43□□□□□ -0.58
CCHCR1-227ENST00000508852 SLC18B1Q6NT16 456 aa11.43□□□□□ -0.58
CCHCR1-227ENST00000508852 DOK3Q7L591 496 aa11.43□□□□□ -0.58
CCHCR1-227ENST00000508852 PLPP7Q8NBV4 271 aa11.43□□□□□ -0.58
CCHCR1-227ENST00000508852 DEFB108BQ8NET1 73 aa11.43□□□□□ -0.58
CCHCR1-227ENST00000508852 OR8B3Q8NGG8 313 aa11.43□□□□□ -0.58
CCHCR1-227ENST00000508852 OR2T4Q8NH00 348 aa11.43□□□□□ -0.58
CCHCR1-227ENST00000508852 OR4K13Q8NH42 304 aa11.43□□□□□ -0.58
CCHCR1-227ENST00000508852 DVL3Q92997 716 aaPredicted RBP11.43□□□□□ -0.58
CCHCR1-227ENST00000508852 NEIL1Q96FI4 390 aaPredicted RBP11.43□□□□□ -0.58
CCHCR1-227ENST00000508852 TSSK2Q96PF2 358 aa11.43□□□□□ -0.58
CCHCR1-227ENST00000508852 OR8B2Q96RD0 313 aa11.43□□□□□ -0.58
CCHCR1-227ENST00000508852 TRIM15Q9C019 465 aa11.43□□□□□ -0.58
CCHCR1-227ENST00000508852 OPA3Q9H6K4 179 aa11.43□□□□□ -0.58
CCHCR1-227ENST00000508852 RPRD1BQ9NQG5 326 aaKnown RBP11.43□□□□□ -0.58
CCHCR1-227ENST00000508852 TAGLN3Q9UI15 199 aa11.43□□□□□ -0.58
CCHCR1-227ENST00000508852 CEACAM18A8MTB9 384 aa11.42□□□□□ -0.58
CCHCR1-227ENST00000508852 F5H5K5 113 aa11.42□□□□□ -0.58
CCHCR1-227ENST00000508852 GMDSO60547 372 aa11.42□□□□□ -0.58
CCHCR1-227ENST00000508852 LCATP04180 440 aa11.42□□□□□ -0.58
CCHCR1-227ENST00000508852 ACSM4P0C7M7 580 aa11.42□□□□□ -0.58
CCHCR1-227ENST00000508852 NPY4RP50391 375 aa11.42□□□□□ -0.58
CCHCR1-227ENST00000508852 HMGA2P52926 109 aa11.42□□□□□ -0.58
CCHCR1-227ENST00000508852 BLVRAP53004 296 aa11.42□□□□□ -0.58
CCHCR1-227ENST00000508852 UBA52P62987 128 aaKnown RBP11.42□□□□□ -0.58
CCHCR1-227ENST00000508852 PAX8Q06710 450 aa11.42□□□□□ -0.58
CCHCR1-227ENST00000508852 TRAP1Q12931 704 aaKnown RBP11.42□□□□□ -0.58
CCHCR1-227ENST00000508852 ZNF620Q6ZNG0 422 aa11.42□□□□□ -0.58
CCHCR1-227ENST00000508852 PGAP1Q75T13 922 aa11.42□□□□□ -0.58
CCHCR1-227ENST00000508852 ZNF771Q7L3S4 317 aaPredicted RBP11.42□□□□□ -0.58
CCHCR1-227ENST00000508852 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.42□□□□□ -0.58
CCHCR1-227ENST00000508852 KLBQ86Z14 1044 aa11.42□□□□□ -0.58
CCHCR1-227ENST00000508852 ZDHHC21Q8IVQ6 265 aa11.42□□□□□ -0.58
CCHCR1-227ENST00000508852 ARHGAP24Q8N264 748 aa11.42□□□□□ -0.58
CCHCR1-227ENST00000508852 RNF148Q8N7C7 305 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms