RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 DEAF1O75398 565 aaPredicted RBP12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 GASTP01350 101 aa12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 HLA-DQA2P01906 255 aa12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 TPTEP56180 551 aa12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 TRAP1Q12931 704 aaKnown RBP12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 MALLQ13021 153 aa12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 MICAQ29983 383 aa12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 KRTAP27-1Q3LI81 207 aa12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 TMEM155Q4W5P6 130 aa12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 TMEM255AQ5JRV8 349 aa12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 AVPI1Q5T686 147 aa12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 OR2T5Q6IEZ7 315 aa12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 ZNF770Q6IQ21 691 aaPredicted RBP12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 SLC18B1Q6NT16 456 aa12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 SHQ1Q6PI26 577 aaKnown RBP12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 CYP2R1Q6VVX0 501 aa12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 IL17RELQ6ZVW7 336 aa12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 LRRC28Q86X40 367 aaPredicted RBP12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 PHC2Q8IXK0 858 aa12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 LNX2Q8N448 690 aa12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 OR2T29Q8NH02 315 aa12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 ST7LQ8TDW4 575 aa12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 ZFAND2BQ8WV99 257 aa12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 GTF3AQ92664 365 aaKnown RBP12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 SPTSSAQ969W0 71 aa12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 ASB9Q96DX5 294 aa12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 LRGUKQ96M69 825 aa12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 DDOQ99489 341 aa12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 PITX2Q99697 317 aa12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 ATF6BQ99941 703 aa12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 GAL3ST1Q99999 423 aa12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 REPIN1Q9BWE0 567 aaKnown RBP12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 DGCR6LQ9BY27 220 aa12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 REEP1Q9H902 201 aa12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 TMEM106BQ9NUM4 274 aa12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 PPP1R3CQ9UQK1 317 aa12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 DNHD1Q96M86 4753 aa12.29□□□□□ -0.44
NIF3L1-205ENST00000409588 TCRBV5S2A0A599 114 aa12.29□□□□□ -0.44
NIF3L1-205ENST00000409588 BHLHE40O14503 412 aa12.29□□□□□ -0.44
NIF3L1-205ENST00000409588 FOXH1O75593 365 aa12.29□□□□□ -0.44
NIF3L1-205ENST00000409588 RAP2AP10114 183 aa12.29□□□□□ -0.44
NIF3L1-205ENST00000409588 GGT2P36268 569 aa12.29□□□□□ -0.44
NIF3L1-205ENST00000409588 SRP9P49458 86 aaKnown RBP12.29□□□□□ -0.44
NIF3L1-205ENST00000409588 ZNF181Q2M3W8 571 aa12.29□□□□□ -0.44
NIF3L1-205ENST00000409588 CD300LDQ6UXZ3 194 aa12.29□□□□□ -0.44
NIF3L1-205ENST00000409588 MUC20Q8N307 709 aaPredicted RBP12.29□□□□□ -0.44
NIF3L1-205ENST00000409588 CELF2-AS1Q8N7Q2 184 aa12.29□□□□□ -0.44
NIF3L1-205ENST00000409588 ATG16L2Q8NAA4 619 aa12.29□□□□□ -0.44
NIF3L1-205ENST00000409588 OR4C15Q8NGM1 316 aa12.29□□□□□ -0.44
NIF3L1-205ENST00000409588 SLC7A6Q92536 515 aa12.29□□□□□ -0.44
NIF3L1-205ENST00000409588 ERGIC1Q969X5 290 aa12.29□□□□□ -0.44
NIF3L1-205ENST00000409588 SLC22A4Q9H015 551 aa12.29□□□□□ -0.44
NIF3L1-205ENST00000409588 G6PC2Q9NQR9 355 aa12.29□□□□□ -0.44
NIF3L1-205ENST00000409588 TMEM100Q9NV29 134 aa12.29□□□□□ -0.44
NIF3L1-205ENST00000409588 PCDHB10Q9UN67 800 aa12.29□□□□□ -0.44
NIF3L1-205ENST00000409588 POLR3KQ9Y2Y1 108 aaPredicted RBP12.29□□□□□ -0.44
NIF3L1-205ENST00000409588 CACNG2Q9Y698 323 aa12.29□□□□□ -0.44
NIF3L1-205ENST00000409588 STAB1Q9NY15 2570 aa12.28□□□□□ -0.44
NIF3L1-205ENST00000409588 A0A1B0GWJ7 208 aa12.28□□□□□ -0.44
NIF3L1-205ENST00000409588 LRRC30A6NM36 301 aa12.28□□□□□ -0.44
NIF3L1-205ENST00000409588 IQCF6A8MYZ5 107 aa12.28□□□□□ -0.44
NIF3L1-205ENST00000409588 IFNGP01579 166 aa12.28□□□□□ -0.44
NIF3L1-205ENST00000409588 DBHP09172 617 aa12.28□□□□□ -0.44
NIF3L1-205ENST00000409588 FMO3P31513 532 aa12.28□□□□□ -0.44
NIF3L1-205ENST00000409588 MEP1BQ16820 701 aa12.28□□□□□ -0.44
NIF3L1-205ENST00000409588 RSPO1Q2MKA7 263 aaPredicted RBP12.28□□□□□ -0.44
NIF3L1-205ENST00000409588 TEX30Q5JUR7 227 aa12.28□□□□□ -0.44
NIF3L1-205ENST00000409588 ZNF362Q5T0B9 420 aaPredicted RBP12.28□□□□□ -0.44
NIF3L1-205ENST00000409588 Q6ZR03 302 aa12.28□□□□□ -0.44
NIF3L1-205ENST00000409588 RINLQ6ZS11 566 aa12.28□□□□□ -0.44
NIF3L1-205ENST00000409588 USP43Q70EL4 1123 aa12.28□□□□□ -0.44
NIF3L1-205ENST00000409588 RHOUQ7L0Q8 258 aa12.28□□□□□ -0.44
NIF3L1-205ENST00000409588 SDR9C7Q8NEX9 313 aa12.28□□□□□ -0.44
NIF3L1-205ENST00000409588 OR2T33Q8NG76 320 aa12.28□□□□□ -0.44
NIF3L1-205ENST00000409588 ZNF418Q8TF45 676 aaPredicted RBP12.28□□□□□ -0.44
NIF3L1-205ENST00000409588 SLC30A2Q9BRI3 323 aa12.28□□□□□ -0.44
NIF3L1-205ENST00000409588 BTBD10Q9BSF8 475 aa12.28□□□□□ -0.44
NIF3L1-205ENST00000409588 GCM1Q9NP62 436 aa12.28□□□□□ -0.44
NIF3L1-205ENST00000409588 SAMHD1Q9Y3Z3 626 aaKnown RBP12.28□□□□□ -0.44
NIF3L1-205ENST00000409588 ISPDA4D126 451 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 ARRDC5A6NEK1 342 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 AQP12BA6NM10 295 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 F5H5K5 113 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 IGHV2-70P01814 119 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 SBK2P0C263 348 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 ACSM4P0C7M7 580 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 T-ENOLP0DO92 83 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 ATP6V1B2P21281 511 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 MDH2P40926 338 aaKnown RBP12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 SLC25A1P53007 311 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 BTG1P62324 171 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 MS4A2Q01362 244 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 PCK2Q16822 640 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 CLEC12AQ5QGZ9 265 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 SLC35F1Q5T1Q4 408 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 DCAF12L2Q5VW00 463 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 CORO6Q6QEF8 472 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 AQP12AQ8IXF9 295 aa12.27□□□□□ -0.45
NIF3L1-205ENST00000409588 C1orf87Q8N0U7 546 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms