RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 NMNAT2Q9BZQ4 307 aa14.36□□□□□ -0.11
BRCC3-202ENST00000340647 EGLN1Q9GZT9 426 aa14.36□□□□□ -0.11
BRCC3-202ENST00000340647 GCM1Q9NP62 436 aa14.36□□□□□ -0.11
BRCC3-202ENST00000340647 TMEM106BQ9NUM4 274 aa14.36□□□□□ -0.11
BRCC3-202ENST00000340647 OPN4Q9UHM6 478 aa14.36□□□□□ -0.11
BRCC3-202ENST00000340647 NPTNQ9Y639 398 aa14.36□□□□□ -0.11
BRCC3-202ENST00000340647 U3KQV3 271 aa14.36□□□□□ -0.11
BRCC3-202ENST00000340647 LOC105371242A0A075B767 164 aa14.35□□□□□ -0.11
BRCC3-202ENST00000340647 TVP23AA6NH52 213 aa14.35□□□□□ -0.11
BRCC3-202ENST00000340647 VENTXO95231 258 aa14.35□□□□□ -0.11
BRCC3-202ENST00000340647 SELEP16581 610 aa14.35□□□□□ -0.11
BRCC3-202ENST00000340647 CALB2P22676 271 aa14.35□□□□□ -0.11
BRCC3-202ENST00000340647 NOS3P29474 1203 aa14.35□□□□□ -0.11
BRCC3-202ENST00000340647 PMELP40967 661 aa14.35□□□□□ -0.11
BRCC3-202ENST00000340647 MNAT1P51948 309 aa14.35□□□□□ -0.11
BRCC3-202ENST00000340647 SEC61A1P61619 476 aaKnown RBP14.35□□□□□ -0.11
BRCC3-202ENST00000340647 ZMYND11Q15326 602 aa14.35□□□□□ -0.11
BRCC3-202ENST00000340647 FAHD2BQ6P2I3 314 aaPredicted RBP14.35□□□□□ -0.11
BRCC3-202ENST00000340647 DHFR2Q86XF0 187 aa14.35□□□□□ -0.11
BRCC3-202ENST00000340647 ARHGAP24Q8N264 748 aa14.35□□□□□ -0.11
BRCC3-202ENST00000340647 RFLNBQ8N5W9 214 aa14.35□□□□□ -0.11
BRCC3-202ENST00000340647 AQP11Q8NBQ7 271 aa14.35□□□□□ -0.11
BRCC3-202ENST00000340647 CCDC197Q8NCU1 140 aa14.35□□□□□ -0.11
BRCC3-202ENST00000340647 OR8G5Q8NG78 346 aa14.35□□□□□ -0.11
BRCC3-202ENST00000340647 OR10AD1Q8NGE0 317 aa14.35□□□□□ -0.11
BRCC3-202ENST00000340647 FAHD2AQ96GK7 314 aa14.35□□□□□ -0.11
BRCC3-202ENST00000340647 NIPSNAP1Q9BPW8 284 aa14.35□□□□□ -0.11
BRCC3-202ENST00000340647 SLC30A2Q9BRI3 323 aa14.35□□□□□ -0.11
BRCC3-202ENST00000340647 METTL17Q9H7H0 456 aaPredicted RBP14.35□□□□□ -0.11
BRCC3-202ENST00000340647 IL19Q9UHD0 177 aa14.35□□□□□ -0.11
BRCC3-202ENST00000340647 POLR1DQ9Y2S0 133 aa14.35□□□□□ -0.11
BRCC3-202ENST00000340647 TENM1Q9UKZ4 2725 aa14.34□□□□□ -0.11
BRCC3-202ENST00000340647 IQCF6A8MYZ5 107 aa14.34□□□□□ -0.11
BRCC3-202ENST00000340647 CCNB2O95067 398 aa14.34□□□□□ -0.11
BRCC3-202ENST00000340647 PNPP00491 289 aa14.34□□□□□ -0.11
BRCC3-202ENST00000340647 FSHBP01225 129 aa14.34□□□□□ -0.11
BRCC3-202ENST00000340647 CLUP10909 449 aa14.34□□□□□ -0.11
BRCC3-202ENST00000340647 OTX1P32242 354 aaPredicted RBP14.34□□□□□ -0.11
BRCC3-202ENST00000340647 SRP14P37108 136 aaKnown RBP14.34□□□□□ -0.11
BRCC3-202ENST00000340647 RGS6P49758 472 aa14.34□□□□□ -0.11
BRCC3-202ENST00000340647 GK2Q14410 553 aaPredicted RBP14.34□□□□□ -0.11
BRCC3-202ENST00000340647 PCK2Q16822 640 aa14.34□□□□□ -0.11
BRCC3-202ENST00000340647 MICAQ29983 383 aa14.34□□□□□ -0.11
BRCC3-202ENST00000340647 ZMAT1Q5H9K5 638 aa14.34□□□□□ -0.11
BRCC3-202ENST00000340647 LINC01590Q5TEZ4 76 aa14.34□□□□□ -0.11
BRCC3-202ENST00000340647 OR2T5Q6IEZ7 315 aa14.34□□□□□ -0.11
BRCC3-202ENST00000340647 LRRC28Q86X40 367 aaPredicted RBP14.34□□□□□ -0.11
BRCC3-202ENST00000340647 ADGRG5Q8IZF4 528 aa14.34□□□□□ -0.11
BRCC3-202ENST00000340647 SEMA6DQ8NFY4 1073 aa14.34□□□□□ -0.11
BRCC3-202ENST00000340647 OR9Q1Q8NGQ5 310 aa14.34□□□□□ -0.11
BRCC3-202ENST00000340647 OR2T29Q8NH02 315 aa14.34□□□□□ -0.11
BRCC3-202ENST00000340647 ZNF420Q8TAQ5 688 aaPredicted RBP14.34□□□□□ -0.11
BRCC3-202ENST00000340647 RAB39BQ96DA2 213 aa14.34□□□□□ -0.11
BRCC3-202ENST00000340647 ATF6BQ99941 703 aa14.34□□□□□ -0.11
BRCC3-202ENST00000340647 HCAR1Q9BXC0 346 aa14.34□□□□□ -0.11
BRCC3-202ENST00000340647 DGCR6LQ9BY27 220 aa14.34□□□□□ -0.11
BRCC3-202ENST00000340647 MUC13Q9H3R2 512 aa14.34□□□□□ -0.11
BRCC3-202ENST00000340647 MMP26Q9NRE1 261 aa14.34□□□□□ -0.11
BRCC3-202ENST00000340647 ARMC1Q9NVT9 282 aa14.34□□□□□ -0.11
BRCC3-202ENST00000340647 F5H0A9 414 aaPredicted RBP14.33□□□□□ -0.12
BRCC3-202ENST00000340647 F5H5K5 113 aa14.33□□□□□ -0.12
BRCC3-202ENST00000340647 TRAPPC2LH3BP13 241 aa14.33□□□□□ -0.12
BRCC3-202ENST00000340647 TMEM178BH3BS89 294 aa14.33□□□□□ -0.12
BRCC3-202ENST00000340647 SOX14O95416 240 aa14.33□□□□□ -0.12
BRCC3-202ENST00000340647 GYPBP06028 91 aa14.33□□□□□ -0.12
BRCC3-202ENST00000340647 SBK2P0C263 348 aa14.33□□□□□ -0.12
BRCC3-202ENST00000340647 ADRA2CP18825 462 aa14.33□□□□□ -0.12
BRCC3-202ENST00000340647 MMP16P51512 607 aa14.33□□□□□ -0.12
BRCC3-202ENST00000340647 HOXA4Q00056 320 aaPredicted RBP14.33□□□□□ -0.12
BRCC3-202ENST00000340647 TRAP1Q12931 704 aaKnown RBP14.33□□□□□ -0.12
BRCC3-202ENST00000340647 CRMP1Q14194 572 aa14.33□□□□□ -0.12
BRCC3-202ENST00000340647 TUSC1Q2TAM9 212 aa14.33□□□□□ -0.12
BRCC3-202ENST00000340647 SNAI3Q3KNW1 292 aa14.33□□□□□ -0.12
BRCC3-202ENST00000340647 LINC00471Q8N535 108 aa14.33□□□□□ -0.12
BRCC3-202ENST00000340647 ZNF511Q8NB15 262 aa14.33□□□□□ -0.12
BRCC3-202ENST00000340647 ASB9Q96DX5 294 aa14.33□□□□□ -0.12
BRCC3-202ENST00000340647 TIMD4Q96H15 378 aa14.33□□□□□ -0.12
BRCC3-202ENST00000340647 MEGF10Q96KG7 1140 aa14.33□□□□□ -0.12
BRCC3-202ENST00000340647 COG8Q96MW5 612 aa14.33□□□□□ -0.12
BRCC3-202ENST00000340647 PITX2Q99697 317 aa14.33□□□□□ -0.12
BRCC3-202ENST00000340647 GAL3ST1Q99999 423 aa14.33□□□□□ -0.12
BRCC3-202ENST00000340647 TSSK6Q9BXA6 273 aa14.33□□□□□ -0.12
BRCC3-202ENST00000340647 C1orf21Q9H246 121 aa14.33□□□□□ -0.12
BRCC3-202ENST00000340647 DDX28Q9NUL7 540 aaKnown RBP14.33□□□□□ -0.12
BRCC3-202ENST00000340647 PRPF19Q9UMS4 504 aaKnown RBP14.33□□□□□ -0.12
BRCC3-202ENST00000340647 SAMHD1Q9Y3Z3 626 aaKnown RBP14.33□□□□□ -0.12
BRCC3-202ENST00000340647 COMMD3-BMI1R4GMX3 469 aa14.33□□□□□ -0.12
BRCC3-202ENST00000340647 IGHV3-64DA0A0J9YX35 117 aa14.32□□□□□ -0.12
BRCC3-202ENST00000340647 F5H5P2 479 aa14.32□□□□□ -0.12
BRCC3-202ENST00000340647 HLA-DPB1P04440 258 aa14.32□□□□□ -0.12
BRCC3-202ENST00000340647 ANPEPP15144 967 aa14.32□□□□□ -0.12
BRCC3-202ENST00000340647 PCMT1P22061 227 aa14.32□□□□□ -0.12
BRCC3-202ENST00000340647 LCN2P80188 198 aa14.32□□□□□ -0.12
BRCC3-202ENST00000340647 SLC3A1Q07837 685 aa14.32□□□□□ -0.12
BRCC3-202ENST00000340647 MAB21L1Q13394 359 aa14.32□□□□□ -0.12
BRCC3-202ENST00000340647 RPL13AP3Q6NVV1 102 aa14.32□□□□□ -0.12
BRCC3-202ENST00000340647 BHLHE23Q8NDY6 225 aa14.32□□□□□ -0.12
BRCC3-202ENST00000340647 CCDC124Q96CT7 223 aaKnown RBP14.32□□□□□ -0.12
BRCC3-202ENST00000340647 PATZ1Q9HBE1 687 aaKnown RBP14.32□□□□□ -0.12
BRCC3-202ENST00000340647 UBAP1Q9NZ09 502 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms