RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 DAPP51397 102 aa14.29□□□□□ -0.12
SSBP4-213ENST00000602088 KRTAP1-1Q07627 177 aa14.29□□□□□ -0.12
SSBP4-213ENST00000602088 LOXL1Q08397 574 aaPredicted RBP14.29□□□□□ -0.12
SSBP4-213ENST00000602088 CARTPTQ16568 116 aa14.29□□□□□ -0.12
SSBP4-213ENST00000602088 TMEM154Q6P9G4 183 aa14.29□□□□□ -0.12
SSBP4-213ENST00000602088 HIPK1Q86Z02 1210 aa14.29□□□□□ -0.12
SSBP4-213ENST00000602088 ZNF786Q8N393 782 aa14.29□□□□□ -0.12
SSBP4-213ENST00000602088 SNX33Q8WV41 574 aa14.29□□□□□ -0.12
SSBP4-213ENST00000602088 LRTOMTQ8WZ04 291 aa14.29□□□□□ -0.12
SSBP4-213ENST00000602088 PTP4A1Q93096 173 aa14.29□□□□□ -0.12
SSBP4-213ENST00000602088 MAP6Q96JE9 813 aa14.29□□□□□ -0.12
SSBP4-213ENST00000602088 PITX2Q99697 317 aa14.29□□□□□ -0.12
SSBP4-213ENST00000602088 PIMREGQ9BSJ6 248 aa14.29□□□□□ -0.12
SSBP4-213ENST00000602088 HCAR1Q9BXC0 346 aa14.29□□□□□ -0.12
SSBP4-213ENST00000602088 POFUT1Q9H488 388 aa14.29□□□□□ -0.12
SSBP4-213ENST00000602088 MED20Q9H944 212 aa14.29□□□□□ -0.12
SSBP4-213ENST00000602088 WDR76Q9H967 626 aa14.29□□□□□ -0.12
SSBP4-213ENST00000602088 COMMD3-BMI1R4GMX3 469 aa14.29□□□□□ -0.12
SSBP4-213ENST00000602088 FAM183AA6NL82 134 aa14.28□□□□□ -0.12
SSBP4-213ENST00000602088 LYNX1G3V0Z9 82 aa14.28□□□□□ -0.12
SSBP4-213ENST00000602088 G3V2T6 193 aa14.28□□□□□ -0.12
SSBP4-213ENST00000602088 J3QW42 95 aa14.28□□□□□ -0.12
SSBP4-213ENST00000602088 ABCA1O95477 2261 aa14.28□□□□□ -0.12
SSBP4-213ENST00000602088 HPXP02790 462 aa14.28□□□□□ -0.12
SSBP4-213ENST00000602088 HMGN1P05114 100 aa14.28□□□□□ -0.12
SSBP4-213ENST00000602088 LYNX1P0DP58 116 aa14.28□□□□□ -0.12
SSBP4-213ENST00000602088 FCGR1AP12314 374 aa14.28□□□□□ -0.12
SSBP4-213ENST00000602088 GIFP27352 417 aa14.28□□□□□ -0.12
SSBP4-213ENST00000602088 RPS27P42677 84 aaKnown RBP14.28□□□□□ -0.12
SSBP4-213ENST00000602088 NR4A2P43354 598 aa14.28□□□□□ -0.12
SSBP4-213ENST00000602088 MAGEB1P43366 347 aa14.28□□□□□ -0.12
SSBP4-213ENST00000602088 RGS6P49758 472 aa14.28□□□□□ -0.12
SSBP4-213ENST00000602088 MMP15P51511 669 aa14.28□□□□□ -0.12
SSBP4-213ENST00000602088 BLVRAP53004 296 aa14.28□□□□□ -0.12
SSBP4-213ENST00000602088 ECH1Q13011 328 aa14.28□□□□□ -0.12
SSBP4-213ENST00000602088 PSG7Q13046 419 aa14.28□□□□□ -0.12
SSBP4-213ENST00000602088 PCK2Q16822 640 aa14.28□□□□□ -0.12
SSBP4-213ENST00000602088 KRTAP27-1Q3LI81 207 aa14.28□□□□□ -0.12
SSBP4-213ENST00000602088 TEX30Q5JUR7 227 aa14.28□□□□□ -0.12
SSBP4-213ENST00000602088 LINC01590Q5TEZ4 76 aa14.28□□□□□ -0.12
SSBP4-213ENST00000602088 AMIGO2Q86SJ2 522 aa14.28□□□□□ -0.12
SSBP4-213ENST00000602088 ZNF511Q8NB15 262 aa14.28□□□□□ -0.12
SSBP4-213ENST00000602088 COG8Q96MW5 612 aa14.28□□□□□ -0.12
SSBP4-213ENST00000602088 SLC25A19Q9HC21 320 aa14.28□□□□□ -0.12
SSBP4-213ENST00000602088 PNRC2Q9NPJ4 139 aaKnown RBP14.28□□□□□ -0.12
SSBP4-213ENST00000602088 PAPOLBQ9NRJ5 636 aaKnown RBP14.28□□□□□ -0.12
SSBP4-213ENST00000602088 NKIRAS2Q9NYR9 191 aa14.28□□□□□ -0.12
SSBP4-213ENST00000602088 KIF17Q9P2E2 1029 aa14.28□□□□□ -0.12
SSBP4-213ENST00000602088 HIVEP2P31629 2446 aa14.27□□□□□ -0.12
SSBP4-213ENST00000602088 SURF4O15260 269 aa14.27□□□□□ -0.13
SSBP4-213ENST00000602088 NCR1O76036 304 aa14.27□□□□□ -0.13
SSBP4-213ENST00000602088 MT-ND5P03915 603 aa14.27□□□□□ -0.13
SSBP4-213ENST00000602088 PSKH1P11801 424 aa14.27□□□□□ -0.13
SSBP4-213ENST00000602088 PAICSP22234 425 aaKnown RBP14.27□□□□□ -0.13
SSBP4-213ENST00000602088 USF1P22415 310 aaPredicted RBP14.27□□□□□ -0.13
SSBP4-213ENST00000602088 ZNF81P51508 661 aa14.27□□□□□ -0.13
SSBP4-213ENST00000602088 CRISP1P54107 249 aa14.27□□□□□ -0.13
SSBP4-213ENST00000602088 ACTR3P61158 418 aa14.27□□□□□ -0.13
SSBP4-213ENST00000602088 PCGF3Q3KNV8 242 aa14.27□□□□□ -0.13
SSBP4-213ENST00000602088 TMEM236Q5W0B7 351 aa14.27□□□□□ -0.13
SSBP4-213ENST00000602088 COLCA1Q6ZS62 124 aa14.27□□□□□ -0.13
SSBP4-213ENST00000602088 ZDHHC13Q8IUH4 622 aa14.27□□□□□ -0.13
SSBP4-213ENST00000602088 PARP8Q8N3A8 854 aa14.27□□□□□ -0.13
SSBP4-213ENST00000602088 ZNF540Q8NDQ6 660 aa14.27□□□□□ -0.13
SSBP4-213ENST00000602088 OR10S1Q8NGN2 331 aa14.27□□□□□ -0.13
SSBP4-213ENST00000602088 OR6K6Q8NGW6 343 aa14.27□□□□□ -0.13
SSBP4-213ENST00000602088 GTF3AQ92664 365 aaKnown RBP14.27□□□□□ -0.13
SSBP4-213ENST00000602088 ATF6BQ99941 703 aa14.27□□□□□ -0.13
SSBP4-213ENST00000602088 YLPM1P49750 1951 aaKnown RBP14.27□□□□□ -0.13
SSBP4-213ENST00000602088 PLSCR5A0PG75 271 aa14.26□□□□□ -0.13
SSBP4-213ENST00000602088 PRR23D1E9PI22 279 aaPredicted RBP14.26□□□□□ -0.13
SSBP4-213ENST00000602088 F5H5K5 113 aa14.26□□□□□ -0.13
SSBP4-213ENST00000602088 ZNF593O00488 134 aaPredicted RBP14.26□□□□□ -0.13
SSBP4-213ENST00000602088 GLCEO94923 617 aa14.26□□□□□ -0.13
SSBP4-213ENST00000602088 ACSM4P0C7M7 580 aa14.26□□□□□ -0.13
SSBP4-213ENST00000602088 PRR23D2P0DMB1 279 aaPredicted RBP14.26□□□□□ -0.13
SSBP4-213ENST00000602088 ZNF23P17027 643 aa14.26□□□□□ -0.13
SSBP4-213ENST00000602088 COL8A2P25067 703 aa14.26□□□□□ -0.13
SSBP4-213ENST00000602088 LIPAP38571 399 aa14.26□□□□□ -0.13
SSBP4-213ENST00000602088 ENTPD1P49961 510 aa14.26□□□□□ -0.13
SSBP4-213ENST00000602088 RIPPLY3P57055 190 aa14.26□□□□□ -0.13
SSBP4-213ENST00000602088 ESRRGP62508 458 aa14.26□□□□□ -0.13
SSBP4-213ENST00000602088 CCL8P80075 99 aa14.26□□□□□ -0.13
SSBP4-213ENST00000602088 MRPS11P82912 194 aaKnown RBP14.26□□□□□ -0.13
SSBP4-213ENST00000602088 RIN1Q13671 783 aa14.26□□□□□ -0.13
SSBP4-213ENST00000602088 KPNB1Q14974 876 aaKnown RBP14.26□□□□□ -0.13
SSBP4-213ENST00000602088 DCXRQ7Z4W1 244 aa14.26□□□□□ -0.13
SSBP4-213ENST00000602088 OR5L1Q8NGL2 311 aa14.26□□□□□ -0.13
SSBP4-213ENST00000602088 RDH5Q92781 318 aa14.26□□□□□ -0.13
SSBP4-213ENST00000602088 APOBEC3DQ96AK3 386 aaPredicted RBP14.26□□□□□ -0.13
SSBP4-213ENST00000602088 OTULINQ96BN8 352 aa14.26□□□□□ -0.13
SSBP4-213ENST00000602088 HAVCR1Q96D42 359 aa14.26□□□□□ -0.13
SSBP4-213ENST00000602088 C1QTNF5Q9BXJ0 243 aa14.26□□□□□ -0.13
SSBP4-213ENST00000602088 BPESC1Q9GZL8 116 aa14.26□□□□□ -0.13
SSBP4-213ENST00000602088 GABARAPL1Q9H0R8 117 aa14.26□□□□□ -0.13
SSBP4-213ENST00000602088 MARCH7Q9H992 704 aa14.26□□□□□ -0.13
SSBP4-213ENST00000602088 CYSLTR2Q9NS75 346 aa14.26□□□□□ -0.13
SSBP4-213ENST00000602088 CGGBP1Q9UFW8 167 aaPredicted RBP14.26□□□□□ -0.13
SSBP4-213ENST00000602088 ZSCAN5BA6NJL1 495 aa14.25□□□□□ -0.13
SSBP4-213ENST00000602088 ADH4P08319 380 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms