RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 C6orf62Q9GZU0 229 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-224ENST00000600718 FAM206AQ9NX38 181 aa15.51■□□□□ 0.07
SHKBP1-224ENST00000600718 PEX16Q9Y5Y5 336 aa15.51■□□□□ 0.07
SHKBP1-224ENST00000600718 TAF4O00268 1085 aa15.51■□□□□ 0.07
SHKBP1-224ENST00000600718 PCBD1P61457 104 aa15.51■□□□□ 0.07
SHKBP1-224ENST00000600718 HSD17B12Q53GQ0 312 aa15.51■□□□□ 0.07
SHKBP1-224ENST00000600718 ELFN2Q5R3F8 820 aa15.51■□□□□ 0.07
SHKBP1-224ENST00000600718 ABHD12BQ7Z5M8 362 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-224ENST00000600718 RDH10Q8IZV5 341 aa15.51■□□□□ 0.07
SHKBP1-224ENST00000600718 PPP1R14AQ96A00 147 aa15.51■□□□□ 0.07
SHKBP1-224ENST00000600718 KCNS3Q9BQ31 491 aa15.51■□□□□ 0.07
SHKBP1-224ENST00000600718 NOX4Q9NPH5 578 aa15.51■□□□□ 0.07
SHKBP1-224ENST00000600718 LUZP4Q9P127 313 aa15.51■□□□□ 0.07
SHKBP1-224ENST00000600718 PLEKHB1Q9UF11 243 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-224ENST00000600718 IQCMA0A1B0GVH7 501 aa15.5■□□□□ 0.07
SHKBP1-224ENST00000600718 A0A1W2PPK0 400 aa15.5■□□□□ 0.07
SHKBP1-224ENST00000600718 ZNHIT1O43257 154 aa15.5■□□□□ 0.07
SHKBP1-224ENST00000600718 FARS2O95363 451 aaKnown RBP15.5■□□□□ 0.07
SHKBP1-224ENST00000600718 RAF1P04049 648 aa15.5■□□□□ 0.07
SHKBP1-224ENST00000600718 ISG15P05161 165 aa15.5■□□□□ 0.07
SHKBP1-224ENST00000600718 B4GALT1P15291 398 aa15.5■□□□□ 0.07
SHKBP1-224ENST00000600718 S100A1P23297 94 aa15.5■□□□□ 0.07
SHKBP1-224ENST00000600718 S100A5P33763 92 aa15.5■□□□□ 0.07
SHKBP1-224ENST00000600718 BCL2L15Q5TBC7 163 aa15.5■□□□□ 0.07
SHKBP1-224ENST00000600718 ZNF813Q6ZN06 617 aa15.5■□□□□ 0.07
SHKBP1-224ENST00000600718 ZNF627Q7L945 461 aa15.5■□□□□ 0.07
SHKBP1-224ENST00000600718 UBE2J2Q8N2K1 259 aa15.5■□□□□ 0.07
SHKBP1-224ENST00000600718 MFSD4AQ8N468 514 aa15.5■□□□□ 0.07
SHKBP1-224ENST00000600718 AP3S1Q92572 193 aa15.5■□□□□ 0.07
SHKBP1-224ENST00000600718 KCNJ15Q99712 375 aa15.5■□□□□ 0.07
SHKBP1-224ENST00000600718 ATF6BQ99941 703 aa15.5■□□□□ 0.07
SHKBP1-224ENST00000600718 MOB1AQ9H8S9 216 aa15.5■□□□□ 0.07
SHKBP1-224ENST00000600718 ZNF71Q9NQZ8 489 aaPredicted RBP15.5■□□□□ 0.07
SHKBP1-224ENST00000600718 TUBD1Q9UJT1 453 aa15.5■□□□□ 0.07
SHKBP1-224ENST00000600718 PIN1P1O15428 100 aa15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 OR3A2P47893 321 aa15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 PSMA6P60900 246 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 ARF1P84077 181 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 SCRN3Q0VDG4 424 aa15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 ODF4Q2M2E3 257 aa15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 ACSF3Q4G176 576 aaPredicted RBP15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 TMEM244Q5VVB8 128 aa15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 ZNF324BQ6AW86 544 aaPredicted RBP15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 OR2A2Q6IF42 318 aa15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 FGD2Q7Z6J4 655 aa15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 HPS1Q92902 700 aa15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 SLC5A6Q9Y289 635 aa15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 TIMM10BQ9Y5J6 103 aa15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 CELSR3Q9NYQ7 3312 aa15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 DNAJC13O75165 2243 aa15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 ACOD1A6NK06 481 aa15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 C1QTNF9BB2RNN3 333 aa15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 C1QTNF9P0C862 333 aa15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 UBCP0CG48 685 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 SRMP19623 302 aa15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 CFL1P23528 166 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 PRKXP51817 358 aa15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 IFITM3Q01628 133 aa15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 FBXW9Q5XUX1 488 aa15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 NSUN5P2Q63ZY6 315 aa15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 SLC16A14Q7RTX9 510 aa15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 ELMOD2Q8IZ81 293 aa15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 PBOV1Q9GZY1 135 aa15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 C12orf49Q9H741 205 aa15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 SMURF1Q9HCE7 757 aa15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 PLEK2Q9NYT0 353 aa15.49■□□□□ 0.07
SHKBP1-224ENST00000600718 SPTBN2O15020 2390 aa15.48■□□□□ 0.07
SHKBP1-224ENST00000600718 URB1O60287 2271 aaKnown RBP15.48■□□□□ 0.07
SHKBP1-224ENST00000600718 TRBV5-7A0A0A0MS05 114 aa15.48■□□□□ 0.07
SHKBP1-224ENST00000600718 SMIM30A4D0T7 59 aa15.48■□□□□ 0.07
SHKBP1-224ENST00000600718 APOC1P02654 83 aa15.48■□□□□ 0.07
SHKBP1-224ENST00000600718 GABRA1P14867 456 aa15.48■□□□□ 0.07
SHKBP1-224ENST00000600718 RAB3BP20337 219 aa15.48■□□□□ 0.07
SHKBP1-224ENST00000600718 ACHEP22303 614 aa15.48■□□□□ 0.07
SHKBP1-224ENST00000600718 MAGEB1P43366 347 aa15.48■□□□□ 0.07
SHKBP1-224ENST00000600718 SOX2P48431 317 aa15.48■□□□□ 0.07
SHKBP1-224ENST00000600718 CAV3P56539 151 aa15.48■□□□□ 0.07
SHKBP1-224ENST00000600718 FAPQ12884 760 aa15.48■□□□□ 0.07
SHKBP1-224ENST00000600718 ECH1Q13011 328 aa15.48■□□□□ 0.07
SHKBP1-224ENST00000600718 RAB35Q15286 201 aa15.48■□□□□ 0.07
SHKBP1-224ENST00000600718 GUSBP1Q15486 140 aa15.48■□□□□ 0.07
SHKBP1-224ENST00000600718 LINC00303Q3SY05 128 aa15.48■□□□□ 0.07
SHKBP1-224ENST00000600718 ZNF585AQ6P3V2 769 aa15.48■□□□□ 0.07
SHKBP1-224ENST00000600718 FAM214BQ7L5A3 538 aa15.48■□□□□ 0.07
SHKBP1-224ENST00000600718 SKA3Q8IX90 412 aa15.48■□□□□ 0.07
SHKBP1-224ENST00000600718 OR10AC1Q8NH08 325 aa15.48■□□□□ 0.07
SHKBP1-224ENST00000600718 HDHD2Q9H0R4 259 aa15.48■□□□□ 0.07
SHKBP1-224ENST00000600718 NUFIP1Q9UHK0 495 aaKnown RBP15.48■□□□□ 0.07
SHKBP1-224ENST00000600718 HHLA2Q9UM44 414 aa15.48■□□□□ 0.07
SHKBP1-224ENST00000600718 APC2O95996 2303 aa15.48■□□□□ 0.07
SHKBP1-224ENST00000600718 SGCEO43556 437 aa15.47■□□□□ 0.07
SHKBP1-224ENST00000600718 NCR1O76036 304 aa15.47■□□□□ 0.07
SHKBP1-224ENST00000600718 FAM87AP0C7U9 286 aa15.47■□□□□ 0.07
SHKBP1-224ENST00000600718 PTGER4P35408 488 aa15.47■□□□□ 0.07
SHKBP1-224ENST00000600718 CX3CR1P49238 355 aa15.47■□□□□ 0.07
SHKBP1-224ENST00000600718 KCNJ8Q15842 424 aa15.47■□□□□ 0.07
SHKBP1-224ENST00000600718 ASPMQ8IZT6 3477 aa15.47■□□□□ 0.07
SHKBP1-224ENST00000600718 ZNF283Q8N7M2 679 aa15.47■□□□□ 0.07
SHKBP1-224ENST00000600718 OR51A4Q8NGJ6 313 aa15.47■□□□□ 0.07
SHKBP1-224ENST00000600718 TSEN15Q8WW01 171 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms