RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 KRCC1Q9NPI7 259 aaPredicted RBP13.69□□□□□ -0.22
MBD3-206ENST00000589901 NUP50Q9UKX7 468 aa13.69□□□□□ -0.22
MBD3-206ENST00000589901 SAMD4AQ9UPU9 718 aaKnown RBP13.69□□□□□ -0.22
MBD3-206ENST00000589901 SIGLEC7Q9Y286 467 aa13.69□□□□□ -0.22
MBD3-206ENST00000589901 PCDHGB1Q9Y5G3 927 aa13.69□□□□□ -0.22
MBD3-206ENST00000589901 INSIG2Q9Y5U4 225 aa13.69□□□□□ -0.22
MBD3-206ENST00000589901 TANC2Q9HCD6 1990 aa13.69□□□□□ -0.22
MBD3-206ENST00000589901 F5H0A9 414 aaPredicted RBP13.68□□□□□ -0.22
MBD3-206ENST00000589901 TMEM178BH3BS89 294 aa13.68□□□□□ -0.22
MBD3-206ENST00000589901 SOCS2O14508 198 aa13.68□□□□□ -0.22
MBD3-206ENST00000589901 RER1O15258 196 aa13.68□□□□□ -0.22
MBD3-206ENST00000589901 SURF4O15260 269 aa13.68□□□□□ -0.22
MBD3-206ENST00000589901 PTP4A3O75365 173 aa13.68□□□□□ -0.22
MBD3-206ENST00000589901 KHDRBS3O75525 346 aaKnown RBP13.68□□□□□ -0.22
MBD3-206ENST00000589901 ZNF205O95201 554 aa13.68□□□□□ -0.22
MBD3-206ENST00000589901 GPANK1O95872 356 aa13.68□□□□□ -0.22
MBD3-206ENST00000589901 NCK1P16333 377 aa13.68□□□□□ -0.22
MBD3-206ENST00000589901 ZNF12P17014 697 aa13.68□□□□□ -0.22
MBD3-206ENST00000589901 SDHAP31040 664 aa13.68□□□□□ -0.22
MBD3-206ENST00000589901 MMP16P51512 607 aa13.68□□□□□ -0.22
MBD3-206ENST00000589901 GYS2P54840 703 aa13.68□□□□□ -0.22
MBD3-206ENST00000589901 KRT72Q14CN4 511 aa13.68□□□□□ -0.22
MBD3-206ENST00000589901 C16orf89Q6UX73 402 aa13.68□□□□□ -0.22
MBD3-206ENST00000589901 RBMS3Q6XE24 437 aaKnown RBP13.68□□□□□ -0.22
MBD3-206ENST00000589901 PTCHD4Q6ZW05 846 aa13.68□□□□□ -0.22
MBD3-206ENST00000589901 GLB1L2Q8IW92 636 aa13.68□□□□□ -0.22
MBD3-206ENST00000589901 ATG16L2Q8NAA4 619 aa13.68□□□□□ -0.22
MBD3-206ENST00000589901 OR10AD1Q8NGE0 317 aa13.68□□□□□ -0.22
MBD3-206ENST00000589901 OR1F12Q8NHA8 337 aa13.68□□□□□ -0.22
MBD3-206ENST00000589901 NUAK2Q9H093 628 aa13.68□□□□□ -0.22
MBD3-206ENST00000589901 GCM1Q9NP62 436 aa13.68□□□□□ -0.22
MBD3-206ENST00000589901 NRIP3Q9NQ35 241 aa13.68□□□□□ -0.22
MBD3-206ENST00000589901 PTTG3PQ9NZH4 202 aa13.68□□□□□ -0.22
MBD3-206ENST00000589901 TAGLN3Q9UI15 199 aa13.68□□□□□ -0.22
MBD3-206ENST00000589901 TMEM5Q9Y2B1 443 aa13.68□□□□□ -0.22
MBD3-206ENST00000589901 ENPP4Q9Y6X5 453 aa13.68□□□□□ -0.22
MBD3-206ENST00000589901 IGHV3-64DA0A0J9YX35 117 aa13.67□□□□□ -0.22
MBD3-206ENST00000589901 CEACAM18A8MTB9 384 aa13.67□□□□□ -0.22
MBD3-206ENST00000589901 A8MXK9 166 aa13.67□□□□□ -0.22
MBD3-206ENST00000589901 NDUFB2O95178 105 aa13.67□□□□□ -0.22
MBD3-206ENST00000589901 RAC2P15153 192 aa13.67□□□□□ -0.22
MBD3-206ENST00000589901 MDH2P40926 338 aaKnown RBP13.67□□□□□ -0.22
MBD3-206ENST00000589901 FXYD6P3P58550 94 aa13.67□□□□□ -0.22
MBD3-206ENST00000589901 LSM6P62312 80 aaKnown RBP13.67□□□□□ -0.22
MBD3-206ENST00000589901 SAMD4BQ5PRF9 694 aaKnown RBP13.67□□□□□ -0.22
MBD3-206ENST00000589901 OR2T2Q6IF00 324 aa13.67□□□□□ -0.22
MBD3-206ENST00000589901 C8orf82Q6P1X6 216 aaPredicted RBP13.67□□□□□ -0.22
MBD3-206ENST00000589901 DOK3Q7L591 496 aa13.67□□□□□ -0.22
MBD3-206ENST00000589901 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.67□□□□□ -0.22
MBD3-206ENST00000589901 ZNF420Q8TAQ5 688 aaPredicted RBP13.67□□□□□ -0.22
MBD3-206ENST00000589901 C1orf147Q96MC9 270 aaPredicted RBP13.67□□□□□ -0.22
MBD3-206ENST00000589901 COG8Q96MW5 612 aa13.67□□□□□ -0.22
MBD3-206ENST00000589901 ZNF48Q96MX3 618 aaPredicted RBP13.67□□□□□ -0.22
MBD3-206ENST00000589901 MRI1Q9BV20 369 aa13.67□□□□□ -0.22
MBD3-206ENST00000589901 ANKRD19PQ9H560 264 aa13.67□□□□□ -0.22
MBD3-206ENST00000589901 VSX1Q9NZR4 365 aaPredicted RBP13.67□□□□□ -0.22
MBD3-206ENST00000589901 ABCD2Q9UBJ2 740 aa13.67□□□□□ -0.22
MBD3-206ENST00000589901 MAGEL2Q9UJ55 1249 aa13.67□□□□□ -0.22
MBD3-206ENST00000589901 IER3IP1Q9Y5U9 82 aa13.67□□□□□ -0.22
MBD3-206ENST00000589901 A0A1W2PRQ8 180 aa13.66□□□□□ -0.22
MBD3-206ENST00000589901 DNAJC9-AS1A6NH13 148 aa13.66□□□□□ -0.22
MBD3-206ENST00000589901 H0YL77 283 aa13.66□□□□□ -0.22
MBD3-206ENST00000589901 CYB5R3P00387 301 aaPredicted RBP13.66□□□□□ -0.22
MBD3-206ENST00000589901 H1F0P07305 194 aaKnown RBP13.66□□□□□ -0.22
MBD3-206ENST00000589901 HKR1P10072 659 aa13.66□□□□□ -0.22
MBD3-206ENST00000589901 PRTN3P24158 256 aa13.66□□□□□ -0.22
MBD3-206ENST00000589901 CD80P33681 288 aa13.66□□□□□ -0.22
MBD3-206ENST00000589901 CDKN2AP42771 156 aaKnown RBP13.66□□□□□ -0.22
MBD3-206ENST00000589901 OMPP47874 163 aa13.66□□□□□ -0.22
MBD3-206ENST00000589901 DBPQ10586 325 aaPredicted RBP13.66□□□□□ -0.22
MBD3-206ENST00000589901 DGCR6Q14129 220 aa13.66□□□□□ -0.22
MBD3-206ENST00000589901 MEP1BQ16820 701 aa13.66□□□□□ -0.22
MBD3-206ENST00000589901 ESCO2Q56NI9 601 aa13.66□□□□□ -0.22
MBD3-206ENST00000589901 FGD3Q5JSP0 725 aa13.66□□□□□ -0.22
MBD3-206ENST00000589901 GPR139Q6DWJ6 353 aa13.66□□□□□ -0.22
MBD3-206ENST00000589901 GLYATQ6IB77 296 aa13.66□□□□□ -0.22
MBD3-206ENST00000589901 FBXW12Q6X9E4 464 aa13.66□□□□□ -0.22
MBD3-206ENST00000589901 MCUR1Q96AQ8 359 aa13.66□□□□□ -0.22
MBD3-206ENST00000589901 RSRC1Q96IZ7 334 aaKnown RBP13.66□□□□□ -0.22
MBD3-206ENST00000589901 MEGF10Q96KG7 1140 aa13.66□□□□□ -0.22
MBD3-206ENST00000589901 TSSK2Q96PF2 358 aa13.66□□□□□ -0.22
MBD3-206ENST00000589901 GPX7Q96SL4 187 aaPredicted RBP13.66□□□□□ -0.22
MBD3-206ENST00000589901 ZNF747Q9BV97 191 aa13.66□□□□□ -0.22
MBD3-206ENST00000589901 NDUFAF4Q9P032 175 aa13.66□□□□□ -0.22
MBD3-206ENST00000589901 IGHV3OR16-10A0A075B7F0 116 aa13.65□□□□□ -0.22
MBD3-206ENST00000589901 TRBV4-1A0A0J9YWV2 114 aa13.65□□□□□ -0.22
MBD3-206ENST00000589901 DCTN6O00399 190 aa13.65□□□□□ -0.22
MBD3-206ENST00000589901 WNT2P09544 360 aa13.65□□□□□ -0.22
MBD3-206ENST00000589901 CENPAP49450 140 aa13.65□□□□□ -0.22
MBD3-206ENST00000589901 RGS6P49758 472 aa13.65□□□□□ -0.22
MBD3-206ENST00000589901 PAX8Q06710 450 aa13.65□□□□□ -0.22
MBD3-206ENST00000589901 FOXL1Q12952 345 aa13.65□□□□□ -0.22
MBD3-206ENST00000589901 BAMBIQ13145 260 aa13.65□□□□□ -0.22
MBD3-206ENST00000589901 SEC23BQ15437 767 aa13.65□□□□□ -0.22
MBD3-206ENST00000589901 KCNMB1Q16558 191 aa13.65□□□□□ -0.22
MBD3-206ENST00000589901 PIGWQ7Z7B1 504 aa13.65□□□□□ -0.22
MBD3-206ENST00000589901 ADCK1Q86TW2 530 aa13.65□□□□□ -0.22
MBD3-206ENST00000589901 PGAM4Q8N0Y7 254 aa13.65□□□□□ -0.22
MBD3-206ENST00000589901 MUC20Q8N307 709 aaPredicted RBP13.65□□□□□ -0.22
MBD3-206ENST00000589901 OR8G5Q8NG78 346 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms