RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 TEAD3Q99594 435 aa13.25□□□□□ -0.29
IFT20-206ENST00000578122 FOXC2Q99958 501 aa13.25□□□□□ -0.29
IFT20-206ENST00000578122 PNRC2Q9NPJ4 139 aaKnown RBP13.25□□□□□ -0.29
IFT20-206ENST00000578122 IMPAD1Q9NX62 359 aa13.25□□□□□ -0.29
IFT20-206ENST00000578122 GRIP1Q9Y3R0 1128 aa13.25□□□□□ -0.29
IFT20-206ENST00000578122 CCDC168Q8NDH2 2452 aa13.24□□□□□ -0.29
IFT20-206ENST00000578122 H0YHG0 523 aa13.24□□□□□ -0.29
IFT20-206ENST00000578122 SELENOFO60613 162 aa13.24□□□□□ -0.29
IFT20-206ENST00000578122 ICMTO60725 284 aa13.24□□□□□ -0.29
IFT20-206ENST00000578122 CDKN1AP38936 164 aa13.24□□□□□ -0.29
IFT20-206ENST00000578122 ERVS71-1P61550 626 aa13.24□□□□□ -0.29
IFT20-206ENST00000578122 PPP1CBP62140 327 aa13.24□□□□□ -0.29
IFT20-206ENST00000578122 GUCA2AQ02747 115 aa13.24□□□□□ -0.29
IFT20-206ENST00000578122 EIF2B1Q14232 305 aaKnown RBP13.24□□□□□ -0.29
IFT20-206ENST00000578122 SWI5Q1ZZU3 235 aa13.24□□□□□ -0.29
IFT20-206ENST00000578122 RSPO1Q2MKA7 263 aaPredicted RBP13.24□□□□□ -0.29
IFT20-206ENST00000578122 RFPL4BQ6ZWI9 263 aa13.24□□□□□ -0.29
IFT20-206ENST00000578122 DPY19L4Q7Z388 723 aa13.24□□□□□ -0.29
IFT20-206ENST00000578122 GID4Q8IVV7 300 aa13.24□□□□□ -0.29
IFT20-206ENST00000578122 PACRGLQ8N7B6 248 aa13.24□□□□□ -0.29
IFT20-206ENST00000578122 OR10S1Q8NGN2 331 aa13.24□□□□□ -0.29
IFT20-206ENST00000578122 OR8J1Q8NGP2 316 aa13.24□□□□□ -0.29
IFT20-206ENST00000578122 ABHD4Q8TB40 342 aa13.24□□□□□ -0.29
IFT20-206ENST00000578122 MRPL24Q96A35 216 aaKnown RBP13.24□□□□□ -0.29
IFT20-206ENST00000578122 RDH12Q96NR8 316 aa13.24□□□□□ -0.29
IFT20-206ENST00000578122 ATF6BQ99941 703 aa13.24□□□□□ -0.29
IFT20-206ENST00000578122 CACNG6Q9BXT2 260 aa13.24□□□□□ -0.29
IFT20-206ENST00000578122 MRPL37Q9BZE1 423 aaKnown RBP13.24□□□□□ -0.29
IFT20-206ENST00000578122 PLK3Q9H4B4 646 aa13.24□□□□□ -0.29
IFT20-206ENST00000578122 ZNF701Q9NV72 531 aaPredicted RBP13.24□□□□□ -0.29
IFT20-206ENST00000578122 TBCCD1Q9NVR7 557 aa13.24□□□□□ -0.29
IFT20-206ENST00000578122 FAM118AQ9NWS6 357 aa13.24□□□□□ -0.29
IFT20-206ENST00000578122 SMPD3Q9NY59 655 aaPredicted RBP13.24□□□□□ -0.29
IFT20-206ENST00000578122 NKX1-2Q9UD57 310 aaPredicted RBP13.24□□□□□ -0.29
IFT20-206ENST00000578122 FZR1Q9UM11 496 aa13.24□□□□□ -0.29
IFT20-206ENST00000578122 GMPPBQ9Y5P6 360 aa13.24□□□□□ -0.29
IFT20-206ENST00000578122 CREBBPQ92793 2442 aa13.23□□□□□ -0.29
IFT20-206ENST00000578122 PDZD2O15018 2839 aa13.23□□□□□ -0.29
IFT20-206ENST00000578122 PRRC2AP48634 2157 aaKnown RBP13.23□□□□□ -0.29
IFT20-206ENST00000578122 TMEM129A0AVI4 362 aa13.23□□□□□ -0.29
IFT20-206ENST00000578122 CASQ2O14958 399 aaPredicted RBP13.23□□□□□ -0.29
IFT20-206ENST00000578122 NGFP01138 241 aa13.23□□□□□ -0.29
IFT20-206ENST00000578122 AVPP01185 164 aa13.23□□□□□ -0.29
IFT20-206ENST00000578122 BMP4P12644 408 aa13.23□□□□□ -0.29
IFT20-206ENST00000578122 PAX1P15863 534 aa13.23□□□□□ -0.29
IFT20-206ENST00000578122 NAA10P41227 235 aaPredicted RBP13.23□□□□□ -0.29
IFT20-206ENST00000578122 PTH2RP49190 550 aa13.23□□□□□ -0.29
IFT20-206ENST00000578122 EVX1P49640 407 aa13.23□□□□□ -0.29
IFT20-206ENST00000578122 SNRPD2P62316 118 aaKnown RBP13.23□□□□□ -0.29
IFT20-206ENST00000578122 TAF13Q15543 124 aa13.23□□□□□ -0.29
IFT20-206ENST00000578122 KRTAP27-1Q3LI81 207 aa13.23□□□□□ -0.29
IFT20-206ENST00000578122 OGFRL1Q5TC84 451 aaPredicted RBP13.23□□□□□ -0.29
IFT20-206ENST00000578122 SLC16A9Q7RTY1 509 aa13.23□□□□□ -0.29
IFT20-206ENST00000578122 C1orf174Q8IYL3 243 aa13.23□□□□□ -0.29
IFT20-206ENST00000578122 ST7LQ8TDW4 575 aa13.23□□□□□ -0.29
IFT20-206ENST00000578122 TRUB1Q8WWH5 349 aaKnown RBP13.23□□□□□ -0.29
IFT20-206ENST00000578122 IPCEF1Q8WWN9 437 aaPredicted RBP13.23□□□□□ -0.29
IFT20-206ENST00000578122 UBE2FQ969M7 185 aa13.23□□□□□ -0.29
IFT20-206ENST00000578122 SLAMF6Q96DU3 332 aa13.23□□□□□ -0.29
IFT20-206ENST00000578122 TRMT61AQ96FX7 289 aaKnown RBP13.23□□□□□ -0.29
IFT20-206ENST00000578122 PERPQ96FX8 193 aa13.23□□□□□ -0.29
IFT20-206ENST00000578122 DOK1Q99704 481 aa13.23□□□□□ -0.29
IFT20-206ENST00000578122 SYT3Q9BQG1 590 aa13.23□□□□□ -0.29
IFT20-206ENST00000578122 ABHD6Q9BV23 337 aa13.23□□□□□ -0.29
IFT20-206ENST00000578122 GSX2Q9BZM3 304 aa13.23□□□□□ -0.29
IFT20-206ENST00000578122 CENPMQ9NSP4 180 aa13.23□□□□□ -0.29
IFT20-206ENST00000578122 DDX28Q9NUL7 540 aaKnown RBP13.23□□□□□ -0.29
IFT20-206ENST00000578122 DNAJC27Q9NZQ0 273 aa13.23□□□□□ -0.29
IFT20-206ENST00000578122 DUSP13Q9UII6 198 aa13.23□□□□□ -0.29
IFT20-206ENST00000578122 PMF1-BGLAPU3KQ54 211 aa13.23□□□□□ -0.29
IFT20-206ENST00000578122 LOC100130705A0A1B0GUX0 176 aa13.22□□□□□ -0.29
IFT20-206ENST00000578122 SLC22A31A6NKX4 558 aa13.22□□□□□ -0.29
IFT20-206ENST00000578122 F5H5K5 113 aa13.22□□□□□ -0.29
IFT20-206ENST00000578122 DLGAP1O14490 977 aa13.22□□□□□ -0.29
IFT20-206ENST00000578122 ZNF250P15622 560 aa13.22□□□□□ -0.29
IFT20-206ENST00000578122 RGS6P49758 472 aa13.22□□□□□ -0.29
IFT20-206ENST00000578122 ATP5J2P56134 94 aa13.22□□□□□ -0.29
IFT20-206ENST00000578122 SELENOVP59797 346 aa13.22□□□□□ -0.29
IFT20-206ENST00000578122 SNRPGP62308 76 aaKnown RBP13.22□□□□□ -0.29
IFT20-206ENST00000578122 SLC34A1Q06495 639 aa13.22□□□□□ -0.29
IFT20-206ENST00000578122 ZNF718Q3SXZ3 478 aa13.22□□□□□ -0.29
IFT20-206ENST00000578122 SPATA46Q5T0L3 261 aa13.22□□□□□ -0.29
IFT20-206ENST00000578122 SPATC1Q76KD6 591 aa13.22□□□□□ -0.29
IFT20-206ENST00000578122 LRP11Q86VZ4 500 aa13.22□□□□□ -0.29
IFT20-206ENST00000578122 LRRC75A-AS1Q8N1F1 130 aa13.22□□□□□ -0.29
IFT20-206ENST00000578122 ZNF555Q8NEP9 628 aa13.22□□□□□ -0.29
IFT20-206ENST00000578122 OTOSQ8NHW6 89 aa13.22□□□□□ -0.29
IFT20-206ENST00000578122 SYNPRQ8TBG9 265 aa13.22□□□□□ -0.29
IFT20-206ENST00000578122 SLC25A40Q8TBP6 338 aa13.22□□□□□ -0.29
IFT20-206ENST00000578122 SPTSSAQ969W0 71 aa13.22□□□□□ -0.29
IFT20-206ENST00000578122 ZNF582Q96NG8 517 aaPredicted RBP13.22□□□□□ -0.29
IFT20-206ENST00000578122 COPS4Q9BT78 406 aa13.22□□□□□ -0.29
IFT20-206ENST00000578122 YIPF3Q9GZM5 350 aa13.22□□□□□ -0.29
IFT20-206ENST00000578122 RNPEPL1Q9HAU8 725 aa13.22□□□□□ -0.29
IFT20-206ENST00000578122 FBXO9Q9UK97 447 aaPredicted RBP13.22□□□□□ -0.29
IFT20-206ENST00000578122 MYO9AB2RTY4 2548 aa13.22□□□□□ -0.29
IFT20-206ENST00000578122 ZNF878C9JN71 531 aa13.21□□□□□ -0.29
IFT20-206ENST00000578122 SLC16A6O15403 523 aa13.21□□□□□ -0.29
IFT20-206ENST00000578122 MRPL3P09001 348 aaKnown RBP13.21□□□□□ -0.29
IFT20-206ENST00000578122 ACSM4P0C7M7 580 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms