RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 FBXL3Q9UKT7 428 aa11.46□□□□□ -0.57
HDAC1-208ENST00000482310 FZR1Q9UM11 496 aa11.46□□□□□ -0.57
HDAC1-208ENST00000482310 MYRFQ9Y2G1 1151 aa11.46□□□□□ -0.57
HDAC1-208ENST00000482310 RNF115Q9Y4L5 304 aa11.46□□□□□ -0.57
HDAC1-208ENST00000482310 RAI1Q7Z5J4 1906 aaPredicted RBP11.46□□□□□ -0.58
HDAC1-208ENST00000482310 CREBBPQ92793 2442 aa11.45□□□□□ -0.58
HDAC1-208ENST00000482310 A0A1W2PQL4 384 aaPredicted RBP11.45□□□□□ -0.58
HDAC1-208ENST00000482310 DAPL1A0PJW8 107 aa11.45□□□□□ -0.58
HDAC1-208ENST00000482310 OR6C6A6NF89 314 aa11.45□□□□□ -0.58
HDAC1-208ENST00000482310 ZNF878C9JN71 531 aa11.45□□□□□ -0.58
HDAC1-208ENST00000482310 SLC1A7O00341 560 aa11.45□□□□□ -0.58
HDAC1-208ENST00000482310 H2BFMP0C1H6 154 aa11.45□□□□□ -0.58
HDAC1-208ENST00000482310 SLC2A1P11166 492 aa11.45□□□□□ -0.58
HDAC1-208ENST00000482310 LOXP28300 417 aaPredicted RBP11.45□□□□□ -0.58
HDAC1-208ENST00000482310 NR1H2P55055 460 aa11.45□□□□□ -0.58
HDAC1-208ENST00000482310 TLE4Q04727 773 aa11.45□□□□□ -0.58
HDAC1-208ENST00000482310 HGFACQ04756 655 aa11.45□□□□□ -0.58
HDAC1-208ENST00000482310 SNTB2Q13425 540 aaKnown RBP11.45□□□□□ -0.58
HDAC1-208ENST00000482310 TMED1Q13445 227 aa11.45□□□□□ -0.58
HDAC1-208ENST00000482310 PCK2Q16822 640 aa11.45□□□□□ -0.58
HDAC1-208ENST00000482310 C6orf141Q5SZD1 244 aa11.45□□□□□ -0.58
HDAC1-208ENST00000482310 SPATA46Q5T0L3 261 aa11.45□□□□□ -0.58
HDAC1-208ENST00000482310 ZNF704Q6ZNC4 412 aaPredicted RBP11.45□□□□□ -0.58
HDAC1-208ENST00000482310 SSX8Q7RTT4 187 aa11.45□□□□□ -0.58
HDAC1-208ENST00000482310 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.45□□□□□ -0.58
HDAC1-208ENST00000482310 ZNF283Q8N7M2 679 aa11.45□□□□□ -0.58
HDAC1-208ENST00000482310 ZNF454Q8N9F8 522 aa11.45□□□□□ -0.58
HDAC1-208ENST00000482310 OR1J2Q8NGS2 313 aa11.45□□□□□ -0.58
HDAC1-208ENST00000482310 POM121L2Q96KW2 1035 aa11.45□□□□□ -0.58
HDAC1-208ENST00000482310 UBTD1Q9HAC8 227 aa11.45□□□□□ -0.58
HDAC1-208ENST00000482310 MOV10Q9HCE1 1003 aaKnown RBP11.45□□□□□ -0.58
HDAC1-208ENST00000482310 SLCO1C1Q9NYB5 712 aa11.45□□□□□ -0.58
HDAC1-208ENST00000482310 A0A1W2PPR1 153 aa11.44□□□□□ -0.58
HDAC1-208ENST00000482310 SHISA9B4DS77 424 aa11.44□□□□□ -0.58
HDAC1-208ENST00000482310 PTGES3LE9PB15 166 aa11.44□□□□□ -0.58
HDAC1-208ENST00000482310 GPRIN2O60269 458 aa11.44□□□□□ -0.58
HDAC1-208ENST00000482310 RPP14O95059 124 aaKnown RBP11.44□□□□□ -0.58
HDAC1-208ENST00000482310 ABHD16AO95870 558 aa11.44□□□□□ -0.58
HDAC1-208ENST00000482310 ADRA2AP08913 450 aa11.44□□□□□ -0.58
HDAC1-208ENST00000482310 ALOX5APP20292 161 aa11.44□□□□□ -0.58
HDAC1-208ENST00000482310 WNT5AP41221 380 aa11.44□□□□□ -0.58
HDAC1-208ENST00000482310 CX3CR1P49238 355 aa11.44□□□□□ -0.58
HDAC1-208ENST00000482310 ERVS71-1P61550 626 aa11.44□□□□□ -0.58
HDAC1-208ENST00000482310 ZNF85Q03923 595 aa11.44□□□□□ -0.58
HDAC1-208ENST00000482310 DAZAP2Q15038 168 aaPredicted RBP11.44□□□□□ -0.58
HDAC1-208ENST00000482310 TP53I3Q53FA7 332 aa11.44□□□□□ -0.58
HDAC1-208ENST00000482310 ZNF322Q6U7Q0 402 aaPredicted RBP11.44□□□□□ -0.58
HDAC1-208ENST00000482310 LHFPL3Q86UP9 236 aa11.44□□□□□ -0.58
HDAC1-208ENST00000482310 NAA40Q86UY6 237 aa11.44□□□□□ -0.58
HDAC1-208ENST00000482310 ZNF295-AS1Q8N0V1 137 aa11.44□□□□□ -0.58
HDAC1-208ENST00000482310 FAM169BQ8N8A8 192 aa11.44□□□□□ -0.58
HDAC1-208ENST00000482310 ZNF540Q8NDQ6 660 aa11.44□□□□□ -0.58
HDAC1-208ENST00000482310 ABHD4Q8TB40 342 aa11.44□□□□□ -0.58
HDAC1-208ENST00000482310 FBLIM1Q8WUP2 373 aa11.44□□□□□ -0.58
HDAC1-208ENST00000482310 SGCDQ92629 289 aa11.44□□□□□ -0.58
HDAC1-208ENST00000482310 AKAP1Q92667 903 aaKnown RBP eCLIP11.44□□□□□ -0.58
HDAC1-208ENST00000482310 GGHQ92820 318 aa11.44□□□□□ -0.58
HDAC1-208ENST00000482310 COQ7Q99807 217 aa11.44□□□□□ -0.58
HDAC1-208ENST00000482310 WACQ9BTA9 647 aa11.44□□□□□ -0.58
HDAC1-208ENST00000482310 UBAP1Q9NZ09 502 aa11.44□□□□□ -0.58
HDAC1-208ENST00000482310 GNG8Q9UK08 70 aa11.44□□□□□ -0.58
HDAC1-208ENST00000482310 GTF2A1LQ9UNN4 478 aa11.44□□□□□ -0.58
HDAC1-208ENST00000482310 EXOGQ9Y2C4 368 aaKnown RBP11.44□□□□□ -0.58
HDAC1-208ENST00000482310 LRP12Q9Y561 859 aa11.44□□□□□ -0.58
HDAC1-208ENST00000482310 TMEM14AQ9Y6G1 99 aa11.44□□□□□ -0.58
HDAC1-208ENST00000482310 M0R135 149 aa11.43□□□□□ -0.58
HDAC1-208ENST00000482310 TBX1O43435 398 aa11.43□□□□□ -0.58
HDAC1-208ENST00000482310 FADS2O95864 444 aaKnown RBP11.43□□□□□ -0.58
HDAC1-208ENST00000482310 LCKP06239 509 aa11.43□□□□□ -0.58
HDAC1-208ENST00000482310 ANXA2P07355 339 aaKnown RBP11.43□□□□□ -0.58
HDAC1-208ENST00000482310 OR2T7P0C7T2 308 aa11.43□□□□□ -0.58
HDAC1-208ENST00000482310 ZNF35P13682 527 aa11.43□□□□□ -0.58
HDAC1-208ENST00000482310 ANOS1P23352 680 aa11.43□□□□□ -0.58
HDAC1-208ENST00000482310 PAX7P23759 505 aa11.43□□□□□ -0.58
HDAC1-208ENST00000482310 OPRL1P41146 370 aa11.43□□□□□ -0.58
HDAC1-208ENST00000482310 PRSS12P56730 875 aa11.43□□□□□ -0.58
HDAC1-208ENST00000482310 MVKQ03426 396 aa11.43□□□□□ -0.58
HDAC1-208ENST00000482310 RAB40BQ12829 278 aa11.43□□□□□ -0.58
HDAC1-208ENST00000482310 MED21Q13503 144 aa11.43□□□□□ -0.58
HDAC1-208ENST00000482310 GFOD2Q3B7J2 385 aa11.43□□□□□ -0.58
HDAC1-208ENST00000482310 C3orf36Q3SXR2 165 aa11.43□□□□□ -0.58
HDAC1-208ENST00000482310 KLHL22Q53GT1 634 aa11.43□□□□□ -0.58
HDAC1-208ENST00000482310 KCTD18Q6PI47 426 aaPredicted RBP11.43□□□□□ -0.58
HDAC1-208ENST00000482310 RFPL4BQ6ZWI9 263 aa11.43□□□□□ -0.58
HDAC1-208ENST00000482310 ZNF101Q8IZC7 436 aa11.43□□□□□ -0.58
HDAC1-208ENST00000482310 STX19Q8N4C7 294 aa11.43□□□□□ -0.58
HDAC1-208ENST00000482310 YIPF7Q8N8F6 280 aa11.43□□□□□ -0.58
HDAC1-208ENST00000482310 OR2T27Q8NH04 317 aa11.43□□□□□ -0.58
HDAC1-208ENST00000482310 SNX33Q8WV41 574 aa11.43□□□□□ -0.58
HDAC1-208ENST00000482310 RNF133Q8WVZ7 376 aa11.43□□□□□ -0.58
HDAC1-208ENST00000482310 SPTSSAQ969W0 71 aa11.43□□□□□ -0.58
HDAC1-208ENST00000482310 ZNF799Q96GE5 643 aa11.43□□□□□ -0.58
HDAC1-208ENST00000482310 C4orf45Q96LM5 186 aa11.43□□□□□ -0.58
HDAC1-208ENST00000482310 CLEC4MQ9H2X3 399 aaPredicted RBP11.43□□□□□ -0.58
HDAC1-208ENST00000482310 POFUT1Q9H488 388 aa11.43□□□□□ -0.58
HDAC1-208ENST00000482310 ELOVL3Q9HB03 270 aa11.43□□□□□ -0.58
HDAC1-208ENST00000482310 DDX28Q9NUL7 540 aaKnown RBP11.43□□□□□ -0.58
HDAC1-208ENST00000482310 SCN3BQ9NY72 215 aa11.43□□□□□ -0.58
HDAC1-208ENST00000482310 EIF3KQ9UBQ5 218 aaKnown RBP11.43□□□□□ -0.58
HDAC1-208ENST00000482310 TACC2O95359 2948 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms