RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 TNFSF11O14788 317 aa13.34□□□□□ -0.27
SCAF11-204ENST00000395454 ISG15P05161 165 aa13.34□□□□□ -0.27
SCAF11-204ENST00000395454 EIF4EP06730 217 aaKnown RBP13.34□□□□□ -0.27
SCAF11-204ENST00000395454 SLC2A2P11168 524 aaPredicted RBP13.34□□□□□ -0.27
SCAF11-204ENST00000395454 ZNF708P17019 499 aa13.34□□□□□ -0.27
SCAF11-204ENST00000395454 MMP16P51512 607 aa13.34□□□□□ -0.27
SCAF11-204ENST00000395454 RAC3P60763 192 aa13.34□□□□□ -0.27
SCAF11-204ENST00000395454 P2RY14Q15391 338 aa13.34□□□□□ -0.27
SCAF11-204ENST00000395454 C10orf128Q5T292 105 aa13.34□□□□□ -0.27
SCAF11-204ENST00000395454 OTPQ5XKR4 325 aa13.34□□□□□ -0.27
SCAF11-204ENST00000395454 GFRALQ6UXV0 394 aa13.34□□□□□ -0.27
SCAF11-204ENST00000395454 STAC2Q6ZMT1 411 aa13.34□□□□□ -0.27
SCAF11-204ENST00000395454 ESPNLQ6ZVH7 1005 aa13.34□□□□□ -0.27
SCAF11-204ENST00000395454 CREB3L2Q70SY1 520 aa13.34□□□□□ -0.27
SCAF11-204ENST00000395454 DCXRQ7Z4W1 244 aa13.34□□□□□ -0.27
SCAF11-204ENST00000395454 SYT9Q86SS6 491 aa13.34□□□□□ -0.27
SCAF11-204ENST00000395454 LRRTM1Q86UE6 522 aa13.34□□□□□ -0.27
SCAF11-204ENST00000395454 TMEM123Q8N131 208 aa13.34□□□□□ -0.27
SCAF11-204ENST00000395454 ZNF676Q8N7Q3 588 aa13.34□□□□□ -0.27
SCAF11-204ENST00000395454 SAMD12Q8N8I0 201 aa13.34□□□□□ -0.27
SCAF11-204ENST00000395454 TMEM54Q969K7 222 aa13.34□□□□□ -0.27
SCAF11-204ENST00000395454 SPATA2Q9UM82 520 aa13.34□□□□□ -0.27
SCAF11-204ENST00000395454 SHANK1Q9Y566 2161 aa13.34□□□□□ -0.27
SCAF11-204ENST00000395454 OR14I1A6ND48 311 aa13.33□□□□□ -0.28
SCAF11-204ENST00000395454 EIF1AXP47813 144 aaKnown RBP13.33□□□□□ -0.28
SCAF11-204ENST00000395454 CLDN18P56856 261 aa13.33□□□□□ -0.28
SCAF11-204ENST00000395454 MFGE8Q08431 387 aaPredicted RBP13.33□□□□□ -0.28
SCAF11-204ENST00000395454 CAMK2DQ13557 499 aa13.33□□□□□ -0.28
SCAF11-204ENST00000395454 OR7E24Q6IFN5 339 aa13.33□□□□□ -0.28
SCAF11-204ENST00000395454 LRFN4Q6PJG9 635 aa13.33□□□□□ -0.28
SCAF11-204ENST00000395454 G6PC2Q9NQR9 355 aa13.33□□□□□ -0.28
SCAF11-204ENST00000395454 EXTL2Q9UBQ6 330 aa13.33□□□□□ -0.28
SCAF11-204ENST00000395454 CAMK2AQ9UQM7 478 aa13.33□□□□□ -0.28
SCAF11-204ENST00000395454 CD37P11049 281 aa13.33□□□□□ -0.28
SCAF11-204ENST00000395454 EDN3P14138 238 aa13.33□□□□□ -0.28
SCAF11-204ENST00000395454 ADRA2CP18825 462 aa13.33□□□□□ -0.28
SCAF11-204ENST00000395454 RFX2P48378 723 aa13.33□□□□□ -0.28
SCAF11-204ENST00000395454 CLDN15P56746 228 aa13.33□□□□□ -0.28
SCAF11-204ENST00000395454 SCAND1P57086 179 aa13.33□□□□□ -0.28
SCAF11-204ENST00000395454 PYDC2Q56P42 97 aa13.33□□□□□ -0.28
SCAF11-204ENST00000395454 Q8N402 240 aa13.33□□□□□ -0.28
SCAF11-204ENST00000395454 MEIOBQ8N635 442 aa13.33□□□□□ -0.28
SCAF11-204ENST00000395454 OR9K2Q8NGE7 335 aa13.33□□□□□ -0.28
SCAF11-204ENST00000395454 OR5M9Q8NGP3 310 aa13.33□□□□□ -0.28
SCAF11-204ENST00000395454 OR10AC1Q8NH08 325 aa13.33□□□□□ -0.28
SCAF11-204ENST00000395454 WDYHV1Q96HA8 205 aa13.33□□□□□ -0.28
SCAF11-204ENST00000395454 OR2M2Q96R28 347 aa13.33□□□□□ -0.28
SCAF11-204ENST00000395454 AK6Q9Y3D8 172 aaKnown RBP13.33□□□□□ -0.28
SCAF11-204ENST00000395454 LHFPL6Q9Y693 200 aa13.33□□□□□ -0.28
SCAF11-204ENST00000395454 V9GY05 133 aa13.33□□□□□ -0.28
SCAF11-204ENST00000395454 NCOA6Q14686 2063 aaPredicted RBP13.32□□□□□ -0.28
SCAF11-204ENST00000395454 ZNF726A6NNF4 738 aa13.32□□□□□ -0.28
SCAF11-204ENST00000395454 SMAD9O15198 467 aaKnown RBP13.32□□□□□ -0.28
SCAF11-204ENST00000395454 SLC43A1O75387 559 aa13.32□□□□□ -0.28
SCAF11-204ENST00000395454 PAHP00439 452 aa13.32□□□□□ -0.28
SCAF11-204ENST00000395454 TPOP07202 933 aa13.32□□□□□ -0.28
SCAF11-204ENST00000395454 SPNP16150 400 aa13.32□□□□□ -0.28
SCAF11-204ENST00000395454 ABOP16442 354 aa13.32□□□□□ -0.28
SCAF11-204ENST00000395454 FSTP19883 344 aa13.32□□□□□ -0.28
SCAF11-204ENST00000395454 TALDO1P37837 337 aa13.32□□□□□ -0.28
SCAF11-204ENST00000395454 NR4A2P43354 598 aa13.32□□□□□ -0.28
SCAF11-204ENST00000395454 MAGEB1P43366 347 aa13.32□□□□□ -0.28
SCAF11-204ENST00000395454 BCL2A1Q16548 175 aa13.32□□□□□ -0.28
SCAF11-204ENST00000395454 CCBE1Q6UXH8 406 aaPredicted RBP13.32□□□□□ -0.28
SCAF11-204ENST00000395454 FGD2Q7Z6J4 655 aa13.32□□□□□ -0.28
SCAF11-204ENST00000395454 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.32□□□□□ -0.28
SCAF11-204ENST00000395454 ZIC4Q8N9L1 334 aa13.32□□□□□ -0.28
SCAF11-204ENST00000395454 OR10H5Q8NGA6 315 aa13.32□□□□□ -0.28
SCAF11-204ENST00000395454 OR4M1Q8NGD0 313 aa13.32□□□□□ -0.28
SCAF11-204ENST00000395454 OR51A4Q8NGJ6 313 aa13.32□□□□□ -0.28
SCAF11-204ENST00000395454 OR10S1Q8NGN2 331 aa13.32□□□□□ -0.28
SCAF11-204ENST00000395454 OR5H6Q8NGV6 325 aa13.32□□□□□ -0.28
SCAF11-204ENST00000395454 OR10D3Q8NH80 312 aa13.32□□□□□ -0.28
SCAF11-204ENST00000395454 TMEM106AQ96A25 262 aa13.32□□□□□ -0.28
SCAF11-204ENST00000395454 NEURL2Q9BR09 285 aa13.32□□□□□ -0.28
SCAF11-204ENST00000395454 SRXN1Q9BYN0 137 aa13.32□□□□□ -0.28
SCAF11-204ENST00000395454 SLITRK2Q9H156 845 aa13.32□□□□□ -0.28
SCAF11-204ENST00000395454 C1orf198Q9H425 327 aa13.32□□□□□ -0.28
SCAF11-204ENST00000395454 GLTPQ9NZD2 209 aa13.32□□□□□ -0.28
SCAF11-204ENST00000395454 RABL2AQ9UBK7 228 aaPredicted RBP13.32□□□□□ -0.28
SCAF11-204ENST00000395454 FOXD3Q9UJU5 478 aaPredicted RBP13.32□□□□□ -0.28
SCAF11-204ENST00000395454 RABL2BQ9UNT1 228 aa13.32□□□□□ -0.28
SCAF11-204ENST00000395454 CPN1P15169 458 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 CLDN17P56750 224 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 IL18Q14116 193 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 ABLIM2Q6H8Q1 611 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 BAIAP2L2Q6UXY1 529 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 CHMP1BQ7LBR1 199 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 ZNF554Q86TJ5 538 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 LINC00346Q8IVM7 164 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 CADM3Q8N126 398 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 INTS12Q96CB8 462 aaKnown RBP13.31□□□□□ -0.28
SCAF11-204ENST00000395454 UCN2Q96RP3 112 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 TCF7L1Q9HCS4 588 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 ETAA1Q9NY74 926 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 RALYQ9UKM9 306 aaKnown RBP13.31□□□□□ -0.28
SCAF11-204ENST00000395454 RCE1Q9Y256 329 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 TRAV8-7A0A075B6U6 113 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 A0A0G2JMP0 313 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 A0A0X1KG70 313 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms