RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 TIMM10BQ9Y5J6 103 aa11.42□□□□□ -0.58
VAMP7-201ENST00000262640 PTPRQQ9UMZ3 2332 aa11.41□□□□□ -0.58
VAMP7-201ENST00000262640 SGCEO43556 437 aa11.41□□□□□ -0.58
VAMP7-201ENST00000262640 ISG15P05161 165 aa11.41□□□□□ -0.58
VAMP7-201ENST00000262640 ACHEP22303 614 aa11.41□□□□□ -0.58
VAMP7-201ENST00000262640 CX3CR1P49238 355 aa11.41□□□□□ -0.58
VAMP7-201ENST00000262640 ODF4Q2M2E3 257 aa11.41□□□□□ -0.58
VAMP7-201ENST00000262640 TMEM244Q5VVB8 128 aa11.41□□□□□ -0.58
VAMP7-201ENST00000262640 SKA3Q8IX90 412 aa11.41□□□□□ -0.58
VAMP7-201ENST00000262640 RDH10Q8IZV5 341 aa11.41□□□□□ -0.58
VAMP7-201ENST00000262640 CISD2Q8N5K1 135 aaKnown RBP11.41□□□□□ -0.58
VAMP7-201ENST00000262640 ZFAND2BQ8WV99 257 aa11.41□□□□□ -0.58
VAMP7-201ENST00000262640 AP3S1Q92572 193 aa11.41□□□□□ -0.58
VAMP7-201ENST00000262640 C6orf62Q9GZU0 229 aaPredicted RBP11.41□□□□□ -0.58
VAMP7-201ENST00000262640 PBOV1Q9GZY1 135 aa11.41□□□□□ -0.58
VAMP7-201ENST00000262640 NOX4Q9NPH5 578 aa11.41□□□□□ -0.58
VAMP7-201ENST00000262640 NUFIP1Q9UHK0 495 aaKnown RBP11.41□□□□□ -0.58
VAMP7-201ENST00000262640 PRSS50Q9UI38 385 aa11.41□□□□□ -0.58
VAMP7-201ENST00000262640 IQCMA0A1B0GVH7 501 aa11.41□□□□□ -0.58
VAMP7-201ENST00000262640 MBD3L4A6NDZ8 208 aaPredicted RBP11.41□□□□□ -0.58
VAMP7-201ENST00000262640 MBD3L3A6NE82 208 aaPredicted RBP11.41□□□□□ -0.58
VAMP7-201ENST00000262640 MBD3L5A6NJ08 208 aaPredicted RBP11.41□□□□□ -0.58
VAMP7-201ENST00000262640 ACOD1A6NK06 481 aa11.41□□□□□ -0.58
VAMP7-201ENST00000262640 FIGNL2A6NMB9 653 aa11.41□□□□□ -0.58
VAMP7-201ENST00000262640 APOC1P02654 83 aa11.41□□□□□ -0.58
VAMP7-201ENST00000262640 RAF1P04049 648 aa11.41□□□□□ -0.58
VAMP7-201ENST00000262640 TPOP07202 933 aa11.41□□□□□ -0.58
VAMP7-201ENST00000262640 ZNF32P17041 273 aa11.41□□□□□ -0.58
VAMP7-201ENST00000262640 MPGP29372 298 aa11.41□□□□□ -0.58
VAMP7-201ENST00000262640 PRKXP51817 358 aa11.41□□□□□ -0.58
VAMP7-201ENST00000262640 ELMOD2Q8IZ81 293 aa11.41□□□□□ -0.58
VAMP7-201ENST00000262640 GCNT2Q8N0V5 402 aa11.41□□□□□ -0.58
VAMP7-201ENST00000262640 ZNF283Q8N7M2 679 aa11.41□□□□□ -0.58
VAMP7-201ENST00000262640 MBD3L2Q8NHZ7 208 aaPredicted RBP11.41□□□□□ -0.58
VAMP7-201ENST00000262640 FAM57AQ8TBR7 257 aa11.41□□□□□ -0.58
VAMP7-201ENST00000262640 TSEN15Q8WW01 171 aaKnown RBP11.41□□□□□ -0.58
VAMP7-201ENST00000262640 SPTSSAQ969W0 71 aa11.41□□□□□ -0.58
VAMP7-201ENST00000262640 PPP1R14AQ96A00 147 aa11.41□□□□□ -0.58
VAMP7-201ENST00000262640 HHLA2Q9UM44 414 aa11.41□□□□□ -0.58
VAMP7-201ENST00000262640 PEX16Q9Y5Y5 336 aa11.41□□□□□ -0.58
VAMP7-201ENST00000262640 TRBV5-7A0A0A0MS05 114 aa11.4□□□□□ -0.58
VAMP7-201ENST00000262640 A0A1W2PPK0 400 aa11.4□□□□□ -0.58
VAMP7-201ENST00000262640 TMEM8BA6NDV4 472 aa11.4□□□□□ -0.58
VAMP7-201ENST00000262640 PIN1P1O15428 100 aa11.4□□□□□ -0.58
VAMP7-201ENST00000262640 HOXD4P09016 255 aaPredicted RBP11.4□□□□□ -0.58
VAMP7-201ENST00000262640 CFL1P23528 166 aaKnown RBP11.4□□□□□ -0.58
VAMP7-201ENST00000262640 TDGF1P3P51864 188 aa11.4□□□□□ -0.58
VAMP7-201ENST00000262640 SLC36A2Q495M3 483 aa11.4□□□□□ -0.58
VAMP7-201ENST00000262640 TFAP2EQ6VUC0 442 aa11.4□□□□□ -0.58
VAMP7-201ENST00000262640 CROCCP3Q8IVE0 287 aa11.4□□□□□ -0.58
VAMP7-201ENST00000262640 OR6K3Q8NGY3 331 aa11.4□□□□□ -0.58
VAMP7-201ENST00000262640 OR10AC1Q8NH08 325 aa11.4□□□□□ -0.58
VAMP7-201ENST00000262640 KCNS3Q9BQ31 491 aa11.4□□□□□ -0.58
VAMP7-201ENST00000262640 OR2H1Q9GZK4 316 aa11.4□□□□□ -0.58
VAMP7-201ENST00000262640 SMURF1Q9HCE7 757 aa11.4□□□□□ -0.58
VAMP7-201ENST00000262640 BRD7Q9NPI1 651 aa11.4□□□□□ -0.58
VAMP7-201ENST00000262640 PLEKHB1Q9UF11 243 aaPredicted RBP11.4□□□□□ -0.58
VAMP7-201ENST00000262640 PHF3Q92576 2039 aaKnown RBP11.4□□□□□ -0.58
VAMP7-201ENST00000262640 IGF2RP11717 2491 aa11.4□□□□□ -0.59
VAMP7-201ENST00000262640 LOC107986453A0A1B0GWG9 222 aa11.4□□□□□ -0.59
VAMP7-201ENST00000262640 SMIM30A4D0T7 59 aa11.4□□□□□ -0.59
VAMP7-201ENST00000262640 SYNGR3O43761 229 aa11.4□□□□□ -0.59
VAMP7-201ENST00000262640 DOK2O60496 412 aa11.4□□□□□ -0.59
VAMP7-201ENST00000262640 CNOT4O95628 575 aaKnown RBP11.4□□□□□ -0.59
VAMP7-201ENST00000262640 INHBBP09529 407 aa11.4□□□□□ -0.59
VAMP7-201ENST00000262640 OTX1P32242 354 aaPredicted RBP11.4□□□□□ -0.59
VAMP7-201ENST00000262640 S100A5P33763 92 aa11.4□□□□□ -0.59
VAMP7-201ENST00000262640 SOX2P48431 317 aa11.4□□□□□ -0.59
VAMP7-201ENST00000262640 BMXP51813 675 aa11.4□□□□□ -0.59
VAMP7-201ENST00000262640 ZNF121P58317 390 aaPredicted RBP11.4□□□□□ -0.59
VAMP7-201ENST00000262640 GALK2Q01415 458 aa11.4□□□□□ -0.59
VAMP7-201ENST00000262640 C1orf185Q5T7R7 199 aa11.4□□□□□ -0.59
VAMP7-201ENST00000262640 C9orf135Q5VTT2 229 aa11.4□□□□□ -0.59
VAMP7-201ENST00000262640 CD163Q86VB7 1156 aa11.4□□□□□ -0.59
VAMP7-201ENST00000262640 OR1F12Q8NHA8 337 aa11.4□□□□□ -0.59
VAMP7-201ENST00000262640 S100ZQ8WXG8 99 aa11.4□□□□□ -0.59
VAMP7-201ENST00000262640 SLITRK2Q9H156 845 aa11.4□□□□□ -0.59
VAMP7-201ENST00000262640 DHDHQ9UQ10 334 aa11.4□□□□□ -0.59
VAMP7-201ENST00000262640 LAMA5O15230 3695 aa11.39□□□□□ -0.59
VAMP7-201ENST00000262640 TTRP02766 147 aa11.39□□□□□ -0.59
VAMP7-201ENST00000262640 MMP7P09237 267 aaPredicted RBP11.39□□□□□ -0.59
VAMP7-201ENST00000262640 ABOP16442 354 aa11.39□□□□□ -0.59
VAMP7-201ENST00000262640 SRMP19623 302 aa11.39□□□□□ -0.59
VAMP7-201ENST00000262640 RAB3BP20337 219 aa11.39□□□□□ -0.59
VAMP7-201ENST00000262640 KIR2DL2P43627 348 aaPredicted RBP11.39□□□□□ -0.59
VAMP7-201ENST00000262640 FOXG1P55316 489 aaPredicted RBP11.39□□□□□ -0.59
VAMP7-201ENST00000262640 CAV3P56539 151 aa11.39□□□□□ -0.59
VAMP7-201ENST00000262640 PSG4Q00888 419 aa11.39□□□□□ -0.59
VAMP7-201ENST00000262640 EIF2S3LQ2VIR3 472 aaKnown RBP11.39□□□□□ -0.59
VAMP7-201ENST00000262640 ZNF774Q6NX45 483 aa11.39□□□□□ -0.59
VAMP7-201ENST00000262640 CNEP1R1Q8N9A8 125 aa11.39□□□□□ -0.59
VAMP7-201ENST00000262640 OR51A4Q8NGJ6 313 aa11.39□□□□□ -0.59
VAMP7-201ENST00000262640 TMEM106AQ96A25 262 aa11.39□□□□□ -0.59
VAMP7-201ENST00000262640 SLX1AQ9BQ83 275 aa11.39□□□□□ -0.59
VAMP7-201ENST00000262640 SLC24A3Q9HC58 644 aa11.39□□□□□ -0.59
VAMP7-201ENST00000262640 CACNA1CQ13936 2221 aa11.39□□□□□ -0.59
VAMP7-201ENST00000262640 CACNA1GO43497 2377 aa11.39□□□□□ -0.59
VAMP7-201ENST00000262640 OR6C6A6NF89 314 aa11.38□□□□□ -0.59
VAMP7-201ENST00000262640 PDCD5O14737 125 aa11.38□□□□□ -0.59
VAMP7-201ENST00000262640 NCR1O76036 304 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms