RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Commd3Q63829 195 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr1061Q7TR72 313 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Fmr1nbQ80ZA7 238 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 AmtQ8CFA2 403 aaKnown RBP14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Slc38a1Q8K2P7 485 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Babam2Q8K3W0 383 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Or51e2Q8VBV9 320 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Tmem63aQ91YT8 804 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Clint1Q99KN9 631 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Cldn12Q9ET43 244 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Kcnip1Q9JJ57 227 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 C1galt1c1Q9JMG2 316 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 FggyA2AJL3 552 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 EdaO54693 391 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 4930512M02RikQ5SQK8 218 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr527Q7TRT9 305 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 SptssaQ8R207 71 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr1100Q8VFM1 321 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Snu13Q9D0T1 128 aaKnown RBP14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Rpl22l1Q9D7S7 122 aaKnown RBP14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 A26c2A0A140LHE4 291 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Tspan15F7BWT7 294 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Q3UUX7 111 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Timd4Q6U7R4 343 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr1148Q7TR35 314 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Tmprss11gQ8BZ10 417 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Pars2Q8CFI5 475 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Slc35a3Q8R1T4 326 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Lypd6bQ9D7F2 191 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Abhd5Q9DBL9 351 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Skp2Q9Z0Z3 424 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr1107A2AVB8 312 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 AregP31955 248 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Rab5cP35278 216 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 CryzP47199 331 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Lsm5P62322 91 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Mex3dQ3UE17 643 aaKnown RBP14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Garem1Q3UFT3 876 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Tsr3Q5HZH2 323 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Zfp9Q8BIS1 454 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Vmn1r21Q8R2C6 297 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Spred1Q924S8 444 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Eef1akmt1Q9CY45 214 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Slc25a18Q9DB41 320 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Keg1Q9DCY0 295 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Ch25hQ9Z0F5 298 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Gm28729A0A1B0GSW2 409 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 A0A286YCQ8 80 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Dpm1O70152 260 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Igkv7-33P01632 114 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 CapzbP47757 277 aaKnown RBP14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Camk2dQ6PHZ2 499 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr1166Q7TR27 316 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Slc22a20Q80UJ1 556 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 0610009B22RikQ8R3W2 140 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr1475Q8VEV6 314 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 RabifQ91X96 123 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 5530401A14RikQ9D3H9 131 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Serinc1Q9QZI8 453 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Adap1E9PY16 374 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Csn1s2bP02664 143 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Hsf1P38532 525 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Nat2P50295 290 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Slc38a8Q5HZH7 432 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Pramel5Q7TPY4 500 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Vsx1Q91V10 363 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr114Q923Q8 312 aa14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Nsa2Q9CR47 260 aaKnown RBP14.23□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Rpl7a-ps5A0A140T8L3 268 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Fam90a1aA2A4E2 429 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 BC051665E9Q623 330 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Zfp26P10076 861 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Ptpn6P29351 595 aaKnown RBP14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 TaglnP37804 201 aaKnown RBP14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Fam187bQ0VAY3 358 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 TrmoQ562D6 431 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Cfap161Q6P8Y0 303 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Stk35Q80ZW0 539 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Csnk1a1Q8BK63 337 aaKnown RBP14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Agpat4Q8K4X7 378 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Rfc3Q8R323 356 aaKnown RBP14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr883Q8VF64 309 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Ighv15-2A0A0A6YX72 118 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Vmn1r177E9PXM3 309 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Gm21820J3KMU2 361 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Creg1O88668 220 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Zfand5O88878 213 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Sim2Q61079 657 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Nptx1Q62443 432 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 SinhcafQ8C8M1 221 aaKnown RBP14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 PhyhipQ8K0S0 330 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Pla1aQ8VI78 456 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Rab31Q921E2 194 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Slc19a3Q99PL8 488 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Pmm2Q9Z2M7 242 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Plin4O88492 1403 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Vmn1r137D3YTY1 307 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Vmn1r143E9PUW9 307 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Vmn1r157E9Q069 297 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr288E9Q1P2 318 aa14.22□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 45.6 ms