Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Gm25239-201ENSMUST00000174915 86 ntBASIC34.73■■■■□ 3.15
Rfc3Q8R323 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
Rfc3Q8R323 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Rfc3Q8R323 Gm15042-201ENSMUST00000120212 883 ntBASIC30.35■■■□□ 2.45
Rfc3Q8R323 Gm24109-201ENSMUST00000175489 103 ntBASIC30.08■■■□□ 2.41
Rfc3Q8R323 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Rfc3Q8R323 Gm15045-201ENSMUST00000117359 883 ntBASIC29.67■■■□□ 2.34
Rfc3Q8R323 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Rfc3Q8R323 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Rfc3Q8R323 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
Rfc3Q8R323 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Rfc3Q8R323 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.99■■■□□ 2.23
Rfc3Q8R323 Gm23366-201ENSMUST00000175022 89 ntBASIC28.98■■■□□ 2.23
Rfc3Q8R323 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Rfc3Q8R323 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Rfc3Q8R323 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Rfc3Q8R323 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Rfc3Q8R323 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.15■■■□□ 2.1
Rfc3Q8R323 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.08■■■□□ 2.09
Rfc3Q8R323 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Rfc3Q8R323 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
Rfc3Q8R323 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Rfc3Q8R323 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Rfc3Q8R323 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.92■■■□□ 2.06
Rfc3Q8R323 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
Rfc3Q8R323 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
Rfc3Q8R323 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.76■■■□□ 2.03
Rfc3Q8R323 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Rfc3Q8R323 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
Rfc3Q8R323 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Rfc3Q8R323 Psd-208ENSMUST00000224556 2034 ntBASIC27.61■■■□□ 2.01
Rfc3Q8R323 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Rfc3Q8R323 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Rfc3Q8R323 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.49■■□□□ 1.99
Rfc3Q8R323 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Rfc3Q8R323 Gm25238-201ENSMUST00000174914 89 ntBASIC27.4■■□□□ 1.98
Rfc3Q8R323 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
Rfc3Q8R323 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.35■■□□□ 1.97
Rfc3Q8R323 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Rfc3Q8R323 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.02■■□□□ 1.92
Rfc3Q8R323 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Rfc3Q8R323 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Rfc3Q8R323 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Rfc3Q8R323 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Rfc3Q8R323 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.79■■□□□ 1.88
Rfc3Q8R323 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.72■■□□□ 1.87
Rfc3Q8R323 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Rfc3Q8R323 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Rfc3Q8R323 Gm27325-201ENSMUST00000175467 74 ntBASIC26.57■■□□□ 1.84
Rfc3Q8R323 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Rfc3Q8R323 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Rfc3Q8R323 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.47■■□□□ 1.83
Rfc3Q8R323 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.46■■□□□ 1.83
Rfc3Q8R323 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.4■■□□□ 1.82
Rfc3Q8R323 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.4■■□□□ 1.82
Rfc3Q8R323 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
Rfc3Q8R323 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rfc3Q8R323 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.26■■□□□ 1.79
Rfc3Q8R323 Gm25262-201ENSMUST00000174934 133 ntBASIC26.23■■□□□ 1.79
Rfc3Q8R323 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rfc3Q8R323 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rfc3Q8R323 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rfc3Q8R323 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Rfc3Q8R323 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Rfc3Q8R323 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Rfc3Q8R323 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Rfc3Q8R323 Rab21-202ENSMUST00000218831 843 ntBASIC26.08■■□□□ 1.77
Rfc3Q8R323 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
Rfc3Q8R323 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.01■■□□□ 1.75
Rfc3Q8R323 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26■■□□□ 1.75
Rfc3Q8R323 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rfc3Q8R323 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Rfc3Q8R323 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Rfc3Q8R323 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Rfc3Q8R323 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Rfc3Q8R323 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
Rfc3Q8R323 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Rfc3Q8R323 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Rfc3Q8R323 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25.81■■□□□ 1.72
Rfc3Q8R323 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.81■■□□□ 1.72
Rfc3Q8R323 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Rfc3Q8R323 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.78■■□□□ 1.72
Rfc3Q8R323 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Rfc3Q8R323 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
Rfc3Q8R323 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Rfc3Q8R323 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Rfc3Q8R323 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
Rfc3Q8R323 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.74■■□□□ 1.71
Rfc3Q8R323 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Rfc3Q8R323 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Rfc3Q8R323 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.71■■□□□ 1.71
Rfc3Q8R323 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Rfc3Q8R323 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Rfc3Q8R323 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Rfc3Q8R323 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.61■■□□□ 1.69
Rfc3Q8R323 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Rfc3Q8R323 Gm26115-201ENSMUST00000175605 87 ntBASIC25.56■■□□□ 1.68
Rfc3Q8R323 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.56■■□□□ 1.68
Rfc3Q8R323 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Rfc3Q8R323 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.51■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms