RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 OR2V1Q8NHB1 315 aa9.23□□□□□ -0.93
VPS25-203ENST00000589520 LGALS14Q8TCE9 139 aa9.23□□□□□ -0.93
VPS25-203ENST00000589520 CPNE4Q96A23 557 aaPredicted RBP9.23□□□□□ -0.93
VPS25-203ENST00000589520 PTX4Q96A99 478 aa9.23□□□□□ -0.93
VPS25-203ENST00000589520 CREB3L1Q96BA8 519 aa9.23□□□□□ -0.93
VPS25-203ENST00000589520 SFXN2Q96NB2 322 aa9.23□□□□□ -0.93
VPS25-203ENST00000589520 NELFAQ9H3P2 528 aa9.23□□□□□ -0.93
VPS25-203ENST00000589520 SEC61A2Q9H9S3 476 aa9.23□□□□□ -0.93
VPS25-203ENST00000589520 LIN7BQ9HAP6 207 aa9.23□□□□□ -0.93
VPS25-203ENST00000589520 PLEKHA1Q9HB21 404 aa9.23□□□□□ -0.93
VPS25-203ENST00000589520 DIABLOQ9NR28 239 aa9.23□□□□□ -0.93
VPS25-203ENST00000589520 NUFIP1Q9UHK0 495 aaKnown RBP9.23□□□□□ -0.93
VPS25-203ENST00000589520 ING1Q9UK53 422 aaPredicted RBP9.23□□□□□ -0.93
VPS25-203ENST00000589520 GTF2A1LQ9UNN4 478 aa9.23□□□□□ -0.93
VPS25-203ENST00000589520 POLR1DQ9Y2S0 133 aa9.23□□□□□ -0.93
VPS25-203ENST00000589520 EMC9Q9Y3B6 208 aa9.23□□□□□ -0.93
VPS25-203ENST00000589520 MPDZO75970 2070 aa9.23□□□□□ -0.93
VPS25-203ENST00000589520 A0A0A6YYH2 397 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 A0A1B0GTH9 108 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 LOC101059948A0A1B0GTJ6 334 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 A0A1W2PNU3 283 aaPredicted RBP9.22□□□□□ -0.93
VPS25-203ENST00000589520 HMX3A6NHT5 357 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 A6NJ64 397 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 LRRC3CA6NJW4 275 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 KLRC4-KLRK1H3BQV0 150 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 GABARAPH6UMI1 98 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 SLC17A2O00624 439 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 DHHO43323 396 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 TRAPPC6AO75865 159 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 OPN1LWP04000 364 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 MAS1P04201 325 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 ERCC1P07992 297 aaPredicted RBP9.22□□□□□ -0.93
VPS25-203ENST00000589520 SPNP16150 400 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 IGFBP3P17936 291 aaPredicted RBP9.22□□□□□ -0.93
VPS25-203ENST00000589520 MSR1P21757 451 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 ITGA3P26006 1051 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 HSD11B1P28845 292 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 NBL1P41271 181 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 CLDN20P56880 219 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 PSMA6P60900 246 aaKnown RBP9.22□□□□□ -0.93
VPS25-203ENST00000589520 BTG1P62324 171 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 FOXK1P85037 733 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 BCL2A1Q16548 175 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 HES5Q5TA89 166 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 IGF2-ASQ6U949 168 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 SERPINA12Q8IW75 414 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 C20orf196Q8IYI0 205 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 CMTM4Q8IZR5 234 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 IL22RA1Q8N6P7 574 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 SYNPRQ8TBG9 265 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 SMIM4Q8WVI0 70 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 HPS1Q92902 700 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 NKD1Q969G9 470 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 ADGRG7Q96K78 797 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 FOXN4Q96NZ1 517 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 OR2M2Q96R28 347 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 ABHD1Q96SE0 405 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 GFI1Q99684 422 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 ACTR6Q9GZN1 396 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 SLC25A18Q9H1K4 315 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 FAM206AQ9NX38 181 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 MALT1Q9UDY8 824 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 OR5V1Q9UGF6 321 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 SLC22A13Q9Y226 551 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 KLF13Q9Y2Y9 288 aaPredicted RBP9.22□□□□□ -0.93
VPS25-203ENST00000589520 CACNG2Q9Y698 323 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 PCNX3Q9H6A9 2034 aa9.22□□□□□ -0.93
VPS25-203ENST00000589520 CPAMD8Q8IZJ3 1885 aa9.21□□□□□ -0.93
VPS25-203ENST00000589520 RALGAPA1Q6GYQ0 2036 aa9.21□□□□□ -0.93
VPS25-203ENST00000589520 LOC100289279A0A1B0GTE1 492 aa9.21□□□□□ -0.94
VPS25-203ENST00000589520 A0A1B0GVI7 797 aa9.21□□□□□ -0.94
VPS25-203ENST00000589520 MEIOCA2RUB1 952 aa9.21□□□□□ -0.94
VPS25-203ENST00000589520 OR6C65A6NJZ3 312 aa9.21□□□□□ -0.94
VPS25-203ENST00000589520 ZNF814B7Z6K7 855 aa9.21□□□□□ -0.94
VPS25-203ENST00000589520 ACOT7O00154 380 aa9.21□□□□□ -0.94
VPS25-203ENST00000589520 TNFSF11O14788 317 aa9.21□□□□□ -0.94
VPS25-203ENST00000589520 EEF1E1O43324 174 aaKnown RBP9.21□□□□□ -0.94
VPS25-203ENST00000589520 SYT7O43581 403 aa9.21□□□□□ -0.94
VPS25-203ENST00000589520 SCGNO76038 276 aa9.21□□□□□ -0.94
VPS25-203ENST00000589520 DHFRP00374 187 aa9.21□□□□□ -0.94
VPS25-203ENST00000589520 FAM157BP0CG42 384 aa9.21□□□□□ -0.94
VPS25-203ENST00000589520 ADRA2CP18825 462 aa9.21□□□□□ -0.94
VPS25-203ENST00000589520 POU3F2P20265 443 aaPredicted RBP9.21□□□□□ -0.94
VPS25-203ENST00000589520 TCEA1P23193 301 aaKnown RBP9.21□□□□□ -0.94
VPS25-203ENST00000589520 GDF1P27539 372 aa9.21□□□□□ -0.94
VPS25-203ENST00000589520 KIR2DL3P43628 341 aa9.21□□□□□ -0.94
VPS25-203ENST00000589520 RAG2P55895 527 aa9.21□□□□□ -0.94
VPS25-203ENST00000589520 GFRA1P56159 465 aa9.21□□□□□ -0.94
VPS25-203ENST00000589520 RAB25P57735 213 aa9.21□□□□□ -0.94
VPS25-203ENST00000589520 MRPS34P82930 218 aaKnown RBP9.21□□□□□ -0.94
VPS25-203ENST00000589520 SSBP1Q04837 148 aaKnown RBP9.21□□□□□ -0.94
VPS25-203ENST00000589520 MFGE8Q08431 387 aaPredicted RBP9.21□□□□□ -0.94
VPS25-203ENST00000589520 C19orf57Q0VDD7 668 aa9.21□□□□□ -0.94
VPS25-203ENST00000589520 FOXO1Q12778 655 aa9.21□□□□□ -0.94
VPS25-203ENST00000589520 ECH1Q13011 328 aa9.21□□□□□ -0.94
VPS25-203ENST00000589520 FAM189A2Q15884 450 aa9.21□□□□□ -0.94
VPS25-203ENST00000589520 RAB11BQ15907 218 aa9.21□□□□□ -0.94
VPS25-203ENST00000589520 HYAL4Q2M3T9 481 aa9.21□□□□□ -0.94
VPS25-203ENST00000589520 NRN1LQ496H8 165 aa9.21□□□□□ -0.94
VPS25-203ENST00000589520 RIPPLY2Q5TAB7 128 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms