RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 CAMK2AQ9UQM7 478 aa12.18□□□□□ -0.46
TPM1-215ENST00000558868 SSUH2Q9Y2M2 353 aa12.18□□□□□ -0.46
TPM1-215ENST00000558868 CSAG2Q9Y5P2 127 aa12.18□□□□□ -0.46
TPM1-215ENST00000558868 LIPGQ9Y5X9 500 aa12.18□□□□□ -0.46
TPM1-215ENST00000558868 HELZ2Q9BYK8 2649 aaKnown RBP12.18□□□□□ -0.46
TPM1-215ENST00000558868 MED12Q93074 2177 aa12.18□□□□□ -0.46
TPM1-215ENST00000558868 WDFY3Q8IZQ1 3526 aa12.17□□□□□ -0.46
TPM1-215ENST00000558868 A0A1B0GVC2 190 aa12.17□□□□□ -0.46
TPM1-215ENST00000558868 TMEM269A0A1B0GVZ9 245 aa12.17□□□□□ -0.46
TPM1-215ENST00000558868 ACOD1A6NK06 481 aa12.17□□□□□ -0.46
TPM1-215ENST00000558868 NOTOA8MTQ0 251 aa12.17□□□□□ -0.46
TPM1-215ENST00000558868 MKRN2OSH3BPM6 223 aa12.17□□□□□ -0.46
TPM1-215ENST00000558868 AQP7O14520 342 aa12.17□□□□□ -0.46
TPM1-215ENST00000558868 CTDSP2O14595 271 aa12.17□□□□□ -0.46
TPM1-215ENST00000558868 SLC19A2O60779 497 aa12.17□□□□□ -0.46
TPM1-215ENST00000558868 SRSF10O75494 262 aaKnown RBP12.17□□□□□ -0.46
TPM1-215ENST00000558868 KRT33AO76009 404 aa12.17□□□□□ -0.46
TPM1-215ENST00000558868 APOC1P02654 83 aa12.17□□□□□ -0.46
TPM1-215ENST00000558868 ISG15P05161 165 aa12.17□□□□□ -0.46
TPM1-215ENST00000558868 YES1P07947 543 aa12.17□□□□□ -0.46
TPM1-215ENST00000558868 UBCP0CG48 685 aaKnown RBP12.17□□□□□ -0.46
TPM1-215ENST00000558868 SRMP19623 302 aa12.17□□□□□ -0.46
TPM1-215ENST00000558868 ACHEP22303 614 aa12.17□□□□□ -0.46
TPM1-215ENST00000558868 TNFSF8P32971 234 aa12.17□□□□□ -0.46
TPM1-215ENST00000558868 EIF2S3P41091 472 aaKnown RBP12.17□□□□□ -0.46
TPM1-215ENST00000558868 PSMD7P51665 324 aa12.17□□□□□ -0.46
TPM1-215ENST00000558868 NRN1LQ496H8 165 aa12.17□□□□□ -0.46
TPM1-215ENST00000558868 FAM27D1Q5T7N8 215 aa12.17□□□□□ -0.46
TPM1-215ENST00000558868 BCL2L15Q5TBC7 163 aa12.17□□□□□ -0.46
TPM1-215ENST00000558868 CCDC190Q86UF4 302 aa12.17□□□□□ -0.46
TPM1-215ENST00000558868 TSEN15Q8WW01 171 aaKnown RBP12.17□□□□□ -0.46
TPM1-215ENST00000558868 RGP1Q92546 391 aaPredicted RBP12.17□□□□□ -0.46
TPM1-215ENST00000558868 ZNF775Q96BV0 537 aaPredicted RBP12.17□□□□□ -0.46
TPM1-215ENST00000558868 ATF6BQ99941 703 aa12.17□□□□□ -0.46
TPM1-215ENST00000558868 SLCO5A1Q9H2Y9 848 aa12.17□□□□□ -0.46
TPM1-215ENST00000558868 TCF7L1Q9HCS4 588 aa12.17□□□□□ -0.46
TPM1-215ENST00000558868 SPRR3Q9UBC9 169 aa12.17□□□□□ -0.46
TPM1-215ENST00000558868 ASH2LQ9UBL3 628 aa12.17□□□□□ -0.46
TPM1-215ENST00000558868 DKK4Q9UBT3 224 aa12.17□□□□□ -0.46
TPM1-215ENST00000558868 OR52A1Q9UKL2 312 aa12.17□□□□□ -0.46
TPM1-215ENST00000558868 WASF3Q9UPY6 502 aa12.17□□□□□ -0.46
TPM1-215ENST00000558868 EMC9Q9Y3B6 208 aa12.17□□□□□ -0.46
TPM1-215ENST00000558868 TRBV5-7A0A0A0MS05 114 aa12.16□□□□□ -0.46
TPM1-215ENST00000558868 SHISA3A0PJX4 238 aa12.16□□□□□ -0.46
TPM1-215ENST00000558868 J3QRK9 145 aa12.16□□□□□ -0.46
TPM1-215ENST00000558868 DVL2O14641 736 aa12.16□□□□□ -0.46
TPM1-215ENST00000558868 RRP8O43159 456 aaKnown RBP12.16□□□□□ -0.46
TPM1-215ENST00000558868 CD2P06729 351 aa12.16□□□□□ -0.46
TPM1-215ENST00000558868 CST2P09228 141 aa12.16□□□□□ -0.46
TPM1-215ENST00000558868 SPINK2P20155 84 aa12.16□□□□□ -0.46
TPM1-215ENST00000558868 PCBD1P61457 104 aa12.16□□□□□ -0.46
TPM1-215ENST00000558868 HIST1H3AP68431 136 aa12.16□□□□□ -0.46
TPM1-215ENST00000558868 PMP22Q01453 160 aa12.16□□□□□ -0.46
TPM1-215ENST00000558868 HIST2H3PS2Q5TEC6 136 aa12.16□□□□□ -0.46
TPM1-215ENST00000558868 SFXN4Q6P4A7 337 aa12.16□□□□□ -0.46
TPM1-215ENST00000558868 CFAP77Q6ZQR2 320 aa12.16□□□□□ -0.46
TPM1-215ENST00000558868 HIST2H3AQ71DI3 136 aa12.16□□□□□ -0.46
TPM1-215ENST00000558868 SYT9Q86SS6 491 aa12.16□□□□□ -0.46
TPM1-215ENST00000558868 IL17RDQ8NFM7 739 aa12.16□□□□□ -0.46
TPM1-215ENST00000558868 FNDC9Q8TBE3 224 aa12.16□□□□□ -0.46
TPM1-215ENST00000558868 NABP1Q96AH0 204 aa12.16□□□□□ -0.46
TPM1-215ENST00000558868 SARAFQ96BY9 339 aa12.16□□□□□ -0.46
TPM1-215ENST00000558868 MRI1Q9BV20 369 aa12.16□□□□□ -0.46
TPM1-215ENST00000558868 ZNF416Q9BWM5 594 aa12.16□□□□□ -0.46
TPM1-215ENST00000558868 PRDM14Q9GZV8 571 aa12.16□□□□□ -0.46
TPM1-215ENST00000558868 PPIL3Q9H2H8 161 aaKnown RBP12.16□□□□□ -0.46
TPM1-215ENST00000558868 ZCCHC4Q9H5U6 513 aa12.16□□□□□ -0.46
TPM1-215ENST00000558868 CRLF2Q9HC73 371 aa12.16□□□□□ -0.46
TPM1-215ENST00000558868 GPR35Q9HC97 309 aa12.16□□□□□ -0.46
TPM1-215ENST00000558868 GLRX2Q9NS18 164 aa12.16□□□□□ -0.46
TPM1-215ENST00000558868 TMEM38BQ9NVV0 291 aa12.16□□□□□ -0.46
TPM1-215ENST00000558868 HHLA2Q9UM44 414 aa12.16□□□□□ -0.46
TPM1-215ENST00000558868 DHDHQ9UQ10 334 aa12.16□□□□□ -0.46
TPM1-215ENST00000558868 A0A1B0GTH9 108 aa12.15□□□□□ -0.46
TPM1-215ENST00000558868 A0A1W2PPK0 400 aa12.15□□□□□ -0.46
TPM1-215ENST00000558868 SLC22A20A6NK97 555 aa12.15□□□□□ -0.46
TPM1-215ENST00000558868 NCR1O76036 304 aa12.15□□□□□ -0.46
TPM1-215ENST00000558868 FARS2O95363 451 aaKnown RBP12.15□□□□□ -0.46
TPM1-215ENST00000558868 WNT11O96014 354 aa12.15□□□□□ -0.46
TPM1-215ENST00000558868 PNPP00491 289 aa12.15□□□□□ -0.46
TPM1-215ENST00000558868 CTSSP25774 331 aa12.15□□□□□ -0.46
TPM1-215ENST00000558868 APEX1P27695 318 aaKnown RBP12.15□□□□□ -0.46
TPM1-215ENST00000558868 CAV3P56539 151 aa12.15□□□□□ -0.46
TPM1-215ENST00000558868 PSMA6P60900 246 aaKnown RBP12.15□□□□□ -0.46
TPM1-215ENST00000558868 MFGE8Q08431 387 aaPredicted RBP12.15□□□□□ -0.46
TPM1-215ENST00000558868 SCRN3Q0VDG4 424 aa12.15□□□□□ -0.46
TPM1-215ENST00000558868 ECH1Q13011 328 aa12.15□□□□□ -0.46
TPM1-215ENST00000558868 ENDOGQ14249 297 aaKnown RBP12.15□□□□□ -0.46
TPM1-215ENST00000558868 SF3B4Q15427 424 aaKnown RBP eCLIP12.15□□□□□ -0.46
TPM1-215ENST00000558868 IDNKQ5T6J7 187 aa12.15□□□□□ -0.46
TPM1-215ENST00000558868 RPUSD3Q6P087 351 aaKnown RBP12.15□□□□□ -0.46
TPM1-215ENST00000558868 METAP1DQ6UB28 335 aaPredicted RBP12.15□□□□□ -0.46
TPM1-215ENST00000558868 Q6ZS92 163 aa12.15□□□□□ -0.46
TPM1-215ENST00000558868 ABHD12BQ7Z5M8 362 aaPredicted RBP12.15□□□□□ -0.46
TPM1-215ENST00000558868 SPACA3Q8IXA5 215 aa12.15□□□□□ -0.46
TPM1-215ENST00000558868 OR10S1Q8NGN2 331 aa12.15□□□□□ -0.46
TPM1-215ENST00000558868 KCNJ15Q99712 375 aa12.15□□□□□ -0.46
TPM1-215ENST00000558868 ABCB9Q9NP78 766 aa12.15□□□□□ -0.46
TPM1-215ENST00000558868 G6PC2Q9NQR9 355 aa12.15□□□□□ -0.46
TPM1-215ENST00000558868 DDX28Q9NUL7 540 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms