RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 ZNF670-ZNF695F2Z2N8 137 aa11.91□□□□□ -0.5
CD44-224ENST00000526669 MAGEB4O15481 346 aaPredicted RBP11.91□□□□□ -0.5
CD44-224ENST00000526669 SYNGR3O43761 229 aa11.91□□□□□ -0.5
CD44-224ENST00000526669 IGKV3-15P01624 115 aa11.91□□□□□ -0.5
CD44-224ENST00000526669 ADRA2AP08913 450 aa11.91□□□□□ -0.5
CD44-224ENST00000526669 DBHP09172 617 aa11.91□□□□□ -0.5
CD44-224ENST00000526669 COX6B1P14854 86 aa11.91□□□□□ -0.5
CD44-224ENST00000526669 ZNF14P17017 642 aaPredicted RBP11.91□□□□□ -0.5
CD44-224ENST00000526669 CCNOP22674 350 aa11.91□□□□□ -0.5
CD44-224ENST00000526669 APLNRP35414 380 aa11.91□□□□□ -0.5
CD44-224ENST00000526669 CXCR4P61073 352 aa11.91□□□□□ -0.5
CD44-224ENST00000526669 HIST1H3AP68431 136 aa11.91□□□□□ -0.5
CD44-224ENST00000526669 BSPH1Q075Z2 132 aa11.91□□□□□ -0.5
CD44-224ENST00000526669 PCK2Q16822 640 aa11.91□□□□□ -0.5
CD44-224ENST00000526669 ELFN2Q5R3F8 820 aa11.91□□□□□ -0.5
CD44-224ENST00000526669 HIST2H3PS2Q5TEC6 136 aa11.91□□□□□ -0.5
CD44-224ENST00000526669 CRYBG3Q68DQ2 2970 aa11.91□□□□□ -0.5
CD44-224ENST00000526669 AHSA2Q719I0 299 aa11.91□□□□□ -0.5
CD44-224ENST00000526669 HIST2H3AQ71DI3 136 aa11.91□□□□□ -0.5
CD44-224ENST00000526669 DPPA2Q7Z7J5 298 aa11.91□□□□□ -0.5
CD44-224ENST00000526669 ZNF786Q8N393 782 aa11.91□□□□□ -0.5
CD44-224ENST00000526669 SLC30A7Q8NEW0 376 aa11.91□□□□□ -0.5
CD44-224ENST00000526669 SGCDQ92629 289 aa11.91□□□□□ -0.5
CD44-224ENST00000526669 PIK3IP1Q96FE7 263 aa11.91□□□□□ -0.5
CD44-224ENST00000526669 OR51B6Q9H340 312 aa11.91□□□□□ -0.5
CD44-224ENST00000526669 PNRC2Q9NPJ4 139 aaKnown RBP11.91□□□□□ -0.5
CD44-224ENST00000526669 CRNNQ9UBG3 495 aaPredicted RBP11.91□□□□□ -0.5
CD44-224ENST00000526669 EXOGQ9Y2C4 368 aaKnown RBP11.91□□□□□ -0.5
CD44-224ENST00000526669 MYRFQ9Y2G1 1151 aa11.91□□□□□ -0.5
CD44-224ENST00000526669 LOC100509620A0A075B734 347 aa11.9□□□□□ -0.5
CD44-224ENST00000526669 IGLV1-44P01699 117 aa11.9□□□□□ -0.5
CD44-224ENST00000526669 SERPINA5P05154 406 aa11.9□□□□□ -0.5
CD44-224ENST00000526669 ALOX5APP20292 161 aa11.9□□□□□ -0.5
CD44-224ENST00000526669 CD40P25942 277 aa11.9□□□□□ -0.5
CD44-224ENST00000526669 STOMP27105 288 aa11.9□□□□□ -0.5
CD44-224ENST00000526669 CALCRP30988 508 aa11.9□□□□□ -0.5
CD44-224ENST00000526669 PEX19P40855 299 aa11.9□□□□□ -0.5
CD44-224ENST00000526669 SLC15A1P46059 708 aa11.9□□□□□ -0.5
CD44-224ENST00000526669 MED21Q13503 144 aa11.9□□□□□ -0.5
CD44-224ENST00000526669 TAF13Q15543 124 aa11.9□□□□□ -0.5
CD44-224ENST00000526669 LRRN1Q6UXK5 716 aa11.9□□□□□ -0.5
CD44-224ENST00000526669 ALDH16A1Q8IZ83 802 aa11.9□□□□□ -0.5
CD44-224ENST00000526669 PIAS4Q8N2W9 510 aaPredicted RBP11.9□□□□□ -0.5
CD44-224ENST00000526669 PAQR4Q8N4S7 273 aaPredicted RBP11.9□□□□□ -0.5
CD44-224ENST00000526669 ACBD4Q8NC06 268 aa11.9□□□□□ -0.5
CD44-224ENST00000526669 ZNF540Q8NDQ6 660 aa11.9□□□□□ -0.5
CD44-224ENST00000526669 OR1F12Q8NHA8 337 aa11.9□□□□□ -0.5
CD44-224ENST00000526669 FAM222BQ8WU58 562 aa11.9□□□□□ -0.5
CD44-224ENST00000526669 RADILQ96JH8 1075 aa11.9□□□□□ -0.5
CD44-224ENST00000526669 PSMG3-AS1Q96PY0 264 aa11.9□□□□□ -0.5
CD44-224ENST00000526669 ATF6BQ99941 703 aa11.9□□□□□ -0.5
CD44-224ENST00000526669 COPS4Q9BT78 406 aa11.9□□□□□ -0.5
CD44-224ENST00000526669 WACQ9BTA9 647 aa11.9□□□□□ -0.5
CD44-224ENST00000526669 CDH20Q9HBT6 801 aa11.9□□□□□ -0.5
CD44-224ENST00000526669 NGBQ9NPG2 151 aa11.9□□□□□ -0.5
CD44-224ENST00000526669 SLCO1C1Q9NYB5 712 aa11.9□□□□□ -0.5
CD44-224ENST00000526669 PLEKHB1Q9UF11 243 aaPredicted RBP11.9□□□□□ -0.5
CD44-224ENST00000526669 IKZF2Q9UKS7 526 aa11.9□□□□□ -0.5
CD44-224ENST00000526669 CENPEQ02224 2701 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 DCHS2Q6V1P9 2916 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 IGHV2OR16-5A0A0B4J2B6 119 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 A0A1W2PQL4 384 aaPredicted RBP11.89□□□□□ -0.51
CD44-224ENST00000526669 C5orf49A4QMS7 147 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 OR6C6A6NF89 314 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 DEFB108AA8MXU0 73 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 ZNF878C9JN71 531 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 PTGES3LE9PB15 166 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 ABCD4O14678 606 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 PLAUP00749 431 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 H2BFMP0C1H6 154 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 GDI2P50395 445 aaKnown RBP11.89□□□□□ -0.51
CD44-224ENST00000526669 PRKXP51817 358 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 GALK2Q01415 458 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 NAAAQ02083 359 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 MVKQ03426 396 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 ZNF85Q03923 595 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 RAB40BQ12829 278 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 TBC1D28Q2M2D7 210 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 KLHL22Q53GT1 634 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 BEX5Q5H9J7 111 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 NCMAPQ5T1S8 102 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 ADAM5Q6NVV9 412 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 ZNF322Q6U7Q0 402 aaPredicted RBP11.89□□□□□ -0.51
CD44-224ENST00000526669 PLEKHG7Q6ZR37 379 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 KRT77Q7Z794 578 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 LHFPL3Q86UP9 236 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 ZNF454Q8N9F8 522 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 HS3ST6Q96QI5 342 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 COQ7Q99807 217 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 SPOCK3Q9BQ16 436 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 KCNS3Q9BQ31 491 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 HDHD2Q9H0R4 259 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 PLCXD1Q9NUJ7 323 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 MRPS18AQ9NVS2 196 aaKnown RBP11.89□□□□□ -0.51
CD44-224ENST00000526669 PAK1IP1Q9NWT1 392 aaPredicted RBP11.89□□□□□ -0.51
CD44-224ENST00000526669 SCN3BQ9NY72 215 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 PSORS1C1Q9UIG5 152 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 FBXL3Q9UKT7 428 aa11.89□□□□□ -0.51
CD44-224ENST00000526669 DAPL1A0PJW8 107 aa11.88□□□□□ -0.51
CD44-224ENST00000526669 EFCAB10A6NFE3 127 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms