RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 OR2T7P0C7T2 308 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 CD79AP11912 226 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 RAC2P15153 192 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 ATP6V1B1P15313 513 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 ZNF823P16415 610 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 GABRB1P18505 474 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 ALOX5APP20292 161 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 PTNP21246 168 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 KITLGP21583 273 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 COL8A1P27658 744 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 HTR1FP30939 366 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 SERPINF1P36955 418 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 DDOSTP39656 456 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 GDI2P50395 445 aaKnown RBP4.39□□□□□ -1.71
HDAC6-223ENST00000480525 MMP16P51512 607 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 IDH3GP51553 393 aaPredicted RBP4.39□□□□□ -1.71
HDAC6-223ENST00000480525 CDH11P55287 796 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 UCP2P55851 309 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 SELENOVP59797 346 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 SNRPD2P62316 118 aaKnown RBP4.39□□□□□ -1.71
HDAC6-223ENST00000480525 CSNK2BP67870 215 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 ACTC1P68032 377 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 ACTA1P68133 377 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 HGFACQ04756 655 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 EGR3Q06889 387 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 MRPL28Q13084 256 aaKnown RBP4.39□□□□□ -1.71
HDAC6-223ENST00000480525 ADIPOQQ15848 244 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 DEFB113Q30KQ7 82 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 PCGF3Q3KNV8 242 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 CLEC12AQ5QGZ9 265 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 TTC23Q5W5X9 447 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 CARD17Q5XLA6 110 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 ACSM5Q6NUN0 579 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 KCTD18Q6PI47 426 aaPredicted RBP4.39□□□□□ -1.71
HDAC6-223ENST00000480525 SLC22A25Q6T423 547 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 UGT2A3Q6UWM9 527 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 ZBTB49Q6ZSB9 765 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 Q6ZSR3 168 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 SLC16A9Q7RTY1 509 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 KCTD20Q7Z5Y7 419 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 IGFN1Q86VF2 1251 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 FBXL14Q8N1E6 418 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 MUC15Q8N387 334 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 CELF2-AS1Q8N7Q2 184 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 PLPP7Q8NBV4 271 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 SETD9Q8NE22 299 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 CPEB3Q8NE35 698 aaKnown RBP4.39□□□□□ -1.71
HDAC6-223ENST00000480525 SDR9C7Q8NEX9 313 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 PROKR2Q8NFJ6 384 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 OR10H5Q8NGA6 315 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 OR2AJ1Q8NGZ0 328 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 OR2T27Q8NH04 317 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 OR1F12Q8NHA8 337 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 NEU4Q8WWR8 484 aaPredicted RBP4.39□□□□□ -1.71
HDAC6-223ENST00000480525 C11orf40Q8WZ69 217 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 AKAP1Q92667 903 aaKnown RBP eCLIP4.39□□□□□ -1.71
HDAC6-223ENST00000480525 SPTSSAQ969W0 71 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 SPSB4Q96A44 273 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 EME1Q96AY2 570 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 TRMT61AQ96FX7 289 aaKnown RBP4.39□□□□□ -1.71
HDAC6-223ENST00000480525 PLEKHA8Q96JA3 519 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 INTS14Q96SY0 518 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 TEAD3Q99594 435 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 ATF6BQ99941 703 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 APOL4Q9BPW4 351 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 SLC22A4Q9H015 551 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 WNT5BQ9H1J7 359 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 VCX3BQ9H321 246 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 RNPEPL1Q9HAU8 725 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 CDH20Q9HBT6 801 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 ABCB9Q9NP78 766 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 PNRC2Q9NPJ4 139 aaKnown RBP4.39□□□□□ -1.71
HDAC6-223ENST00000480525 HINT3Q9NQE9 182 aaKnown RBP4.39□□□□□ -1.71
HDAC6-223ENST00000480525 INPP5EQ9NRR6 644 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 SMPD3Q9NY59 655 aaPredicted RBP4.39□□□□□ -1.71
HDAC6-223ENST00000480525 ASH2LQ9UBL3 628 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 EIF3KQ9UBQ5 218 aaKnown RBP4.39□□□□□ -1.71
HDAC6-223ENST00000480525 ZDHHC8Q9ULC8 765 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 COA3Q9Y2R0 106 aaPredicted RBP4.39□□□□□ -1.71
HDAC6-223ENST00000480525 CMAHPQ9Y471 501 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 PMF1-BGLAPU3KQ54 211 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 HIVEP1P15822 2718 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 ABCA1O95477 2261 aa4.39□□□□□ -1.71
HDAC6-223ENST00000480525 CELSR1Q9NYQ6 3014 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 TLN2Q9Y4G6 2542 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 AKAP9Q99996 3911 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 NSD1Q96L73 2696 aaPredicted RBP4.38□□□□□ -1.71
HDAC6-223ENST00000480525 LOC100509620A0A075B734 347 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 A0A096LPE4 126 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 A0A0U1RQV5 110 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 A0A1W2PPL8 197 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 A0A1W2PPZ6 126 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 ATP6V1G2-DDX39BF2Z307 99 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 J3QRE1 110 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 M0R1B8 84 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 DLGAP1O14490 977 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 XRCC2O43543 280 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 DOK2O60496 412 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 SULT1C4O75897 302 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 SOX14O95416 240 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms