RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 PHC2Q8IXK0 858 aa12.02□□□□□ -0.49
VAPB-202ENST00000395802 NDNFQ8TB73 568 aa12.02□□□□□ -0.49
VAPB-202ENST00000395802 RND1Q92730 232 aa12.02□□□□□ -0.49
VAPB-202ENST00000395802 PELI1Q96FA3 418 aa12.02□□□□□ -0.49
VAPB-202ENST00000395802 HDHD2Q9H0R4 259 aa12.02□□□□□ -0.49
VAPB-202ENST00000395802 OR51E2Q9H255 320 aa12.02□□□□□ -0.49
VAPB-202ENST00000395802 ELOVL3Q9HB03 270 aa12.02□□□□□ -0.49
VAPB-202ENST00000395802 CENPMQ9NSP4 180 aa12.02□□□□□ -0.49
VAPB-202ENST00000395802 MRM2Q9UI43 246 aaKnown RBP12.02□□□□□ -0.49
VAPB-202ENST00000395802 CIB4A0PJX0 185 aa12.01□□□□□ -0.49
VAPB-202ENST00000395802 MSTNO14793 375 aa12.01□□□□□ -0.49
VAPB-202ENST00000395802 PLPP2O43688 288 aa12.01□□□□□ -0.49
VAPB-202ENST00000395802 UBL3O95164 117 aa12.01□□□□□ -0.49
VAPB-202ENST00000395802 CD1AP06126 327 aa12.01□□□□□ -0.49
VAPB-202ENST00000395802 CELP19835 753 aa12.01□□□□□ -0.49
VAPB-202ENST00000395802 ARR3P36575 388 aa12.01□□□□□ -0.49
VAPB-202ENST00000395802 CA7P43166 264 aa12.01□□□□□ -0.49
VAPB-202ENST00000395802 ENDOGQ14249 297 aaKnown RBP12.01□□□□□ -0.49
VAPB-202ENST00000395802 C1QTNF12Q5T7M4 302 aa12.01□□□□□ -0.49
VAPB-202ENST00000395802 LIPKQ5VXJ0 399 aa12.01□□□□□ -0.49
VAPB-202ENST00000395802 CORO6Q6QEF8 472 aa12.01□□□□□ -0.49
VAPB-202ENST00000395802 LRRN1Q6UXK5 716 aa12.01□□□□□ -0.49
VAPB-202ENST00000395802 C3P1Q6ZMU1 363 aa12.01□□□□□ -0.49
VAPB-202ENST00000395802 GDPGP1Q6ZNW5 385 aa12.01□□□□□ -0.49
VAPB-202ENST00000395802 BTLAQ7Z6A9 289 aa12.01□□□□□ -0.49
VAPB-202ENST00000395802 MS4A15Q8N5U1 240 aa12.01□□□□□ -0.49
VAPB-202ENST00000395802 RFLNBQ8N5W9 214 aa12.01□□□□□ -0.49
VAPB-202ENST00000395802 OR1K1Q8NGR3 316 aa12.01□□□□□ -0.49
VAPB-202ENST00000395802 SPTSSAQ969W0 71 aa12.01□□□□□ -0.49
VAPB-202ENST00000395802 BOD1Q96IK1 185 aa12.01□□□□□ -0.49
VAPB-202ENST00000395802 COQ7Q99807 217 aa12.01□□□□□ -0.49
VAPB-202ENST00000395802 TTTY10Q9BZA0 68 aa12.01□□□□□ -0.49
VAPB-202ENST00000395802 MOV10Q9HCE1 1003 aaKnown RBP12.01□□□□□ -0.49
VAPB-202ENST00000395802 ACOXLQ9NUZ1 547 aa12.01□□□□□ -0.49
VAPB-202ENST00000395802 PLEK2Q9NYT0 353 aa12.01□□□□□ -0.49
VAPB-202ENST00000395802 KLHDC2Q9Y2U9 406 aa12.01□□□□□ -0.49
VAPB-202ENST00000395802 ARHGAP21Q5T5U3 1957 aa12.01□□□□□ -0.49
VAPB-202ENST00000395802 ZGRF1Q86YA3 2104 aa12.01□□□□□ -0.49
VAPB-202ENST00000395802 RER1O15258 196 aa12□□□□□ -0.49
VAPB-202ENST00000395802 SGCEO43556 437 aa12□□□□□ -0.49
VAPB-202ENST00000395802 CGAP01215 116 aa12□□□□□ -0.49
VAPB-202ENST00000395802 EDNRAP25101 427 aa12□□□□□ -0.49
VAPB-202ENST00000395802 GABRA5P31644 462 aa12□□□□□ -0.49
VAPB-202ENST00000395802 TGFBR1P36897 503 aa12□□□□□ -0.49
VAPB-202ENST00000395802 OPRL1P41146 370 aa12□□□□□ -0.49
VAPB-202ENST00000395802 HIST1H3AP68431 136 aa12□□□□□ -0.49
VAPB-202ENST00000395802 RAB35Q15286 201 aa12□□□□□ -0.49
VAPB-202ENST00000395802 ELFN2Q5R3F8 820 aa12□□□□□ -0.49
VAPB-202ENST00000395802 HIST2H3PS2Q5TEC6 136 aa12□□□□□ -0.49
VAPB-202ENST00000395802 TMEM53Q6P2H8 277 aa12□□□□□ -0.49
VAPB-202ENST00000395802 HIST2H3AQ71DI3 136 aa12□□□□□ -0.49
VAPB-202ENST00000395802 C17orf78Q8N4C9 275 aa12□□□□□ -0.49
VAPB-202ENST00000395802 SMIM19Q96E16 107 aa12□□□□□ -0.49
VAPB-202ENST00000395802 MAP6Q96JE9 813 aa12□□□□□ -0.49
VAPB-202ENST00000395802 ATF6BQ99941 703 aa12□□□□□ -0.49
VAPB-202ENST00000395802 SH3GL3Q99963 347 aa12□□□□□ -0.49
VAPB-202ENST00000395802 USB1Q9BQ65 265 aaKnown RBP12□□□□□ -0.49
VAPB-202ENST00000395802 HDHD5Q9BXW7 423 aa12□□□□□ -0.49
VAPB-202ENST00000395802 MOB1AQ9H8S9 216 aa12□□□□□ -0.49
VAPB-202ENST00000395802 RNF121Q9H920 327 aa12□□□□□ -0.49
VAPB-202ENST00000395802 DDX28Q9NUL7 540 aaKnown RBP12□□□□□ -0.49
VAPB-202ENST00000395802 SLCO1C1Q9NYB5 712 aa12□□□□□ -0.49
VAPB-202ENST00000395802 ATPIF1Q9UII2 106 aa12□□□□□ -0.49
VAPB-202ENST00000395802 SH3BGRL2Q9UJC5 107 aa12□□□□□ -0.49
VAPB-202ENST00000395802 MEMO1Q9Y316 297 aa12□□□□□ -0.49
VAPB-202ENST00000395802 LRP12Q9Y561 859 aa12□□□□□ -0.49
VAPB-202ENST00000395802 ATRXP46100 2492 aa12□□□□□ -0.49
VAPB-202ENST00000395802 ARPC4-TTLL3A0A0A6YYG9 625 aa12□□□□□ -0.49
VAPB-202ENST00000395802 TRBV2A0A0J9YWF9 115 aa12□□□□□ -0.49
VAPB-202ENST00000395802 PSMD9O00233 223 aa12□□□□□ -0.49
VAPB-202ENST00000395802 GPRIN2O60269 458 aa12□□□□□ -0.49
VAPB-202ENST00000395802 ABHD16AO95870 558 aa12□□□□□ -0.49
VAPB-202ENST00000395802 SERPINA3P01011 423 aa12□□□□□ -0.49
VAPB-202ENST00000395802 HLA-DPB1P04440 258 aa12□□□□□ -0.49
VAPB-202ENST00000395802 ITGA5P08648 1049 aa12□□□□□ -0.49
VAPB-202ENST00000395802 COX5AP20674 150 aa12□□□□□ -0.49
VAPB-202ENST00000395802 GALP22466 123 aa12□□□□□ -0.49
VAPB-202ENST00000395802 PEX19P40855 299 aa12□□□□□ -0.49
VAPB-202ENST00000395802 MMP16P51512 607 aa12□□□□□ -0.49
VAPB-202ENST00000395802 CCR9P51686 369 aa12□□□□□ -0.49
VAPB-202ENST00000395802 UBE2NP61088 152 aaKnown RBP12□□□□□ -0.49
VAPB-202ENST00000395802 CDK5R1Q15078 307 aa12□□□□□ -0.49
VAPB-202ENST00000395802 SOWAHCQ53LP3 525 aaPredicted RBP12□□□□□ -0.49
VAPB-202ENST00000395802 C9orf135Q5VTT2 229 aa12□□□□□ -0.49
VAPB-202ENST00000395802 MTFR2Q6P444 385 aa12□□□□□ -0.49
VAPB-202ENST00000395802 FDX2Q6P4F2 183 aa12□□□□□ -0.49
VAPB-202ENST00000395802 CFAP77Q6ZQR2 320 aa12□□□□□ -0.49
VAPB-202ENST00000395802 MRGPRGQ86SM5 289 aa12□□□□□ -0.49
VAPB-202ENST00000395802 SKA3Q8IX90 412 aa12□□□□□ -0.49
VAPB-202ENST00000395802 GABRG1Q8N1C3 465 aa12□□□□□ -0.49
VAPB-202ENST00000395802 NAXEQ8NCW5 288 aa12□□□□□ -0.49
VAPB-202ENST00000395802 PHF3Q92576 2039 aaKnown RBP12□□□□□ -0.49
VAPB-202ENST00000395802 FBXO17Q96EF6 278 aa12□□□□□ -0.49
VAPB-202ENST00000395802 CHCHD6Q9BRQ6 235 aa12□□□□□ -0.49
VAPB-202ENST00000395802 CENPOQ9BU64 300 aa12□□□□□ -0.49
VAPB-202ENST00000395802 COMMD4Q9H0A8 199 aa12□□□□□ -0.49
VAPB-202ENST00000395802 SP140LQ9H930 580 aa12□□□□□ -0.49
VAPB-202ENST00000395802 OBP2BQ9NPH6 170 aa12□□□□□ -0.49
VAPB-202ENST00000395802 FBXL3Q9UKT7 428 aa12□□□□□ -0.49
VAPB-202ENST00000395802 USP24Q9UPU5 2620 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms