RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 RFPL4BQ6ZWI9 263 aa17.12■□□□□ 0.33
TMEM53-205ENST00000372244 CYB561A3Q8NBI2 242 aa17.12■□□□□ 0.33
TMEM53-205ENST00000372244 OR2T33Q8NG76 320 aa17.12■□□□□ 0.33
TMEM53-205ENST00000372244 KLF14Q8TD94 323 aaPredicted RBP17.12■□□□□ 0.33
TMEM53-205ENST00000372244 UBASH3BQ8TF42 649 aa17.12■□□□□ 0.33
TMEM53-205ENST00000372244 RBM4Q9BWF3 364 aaKnown RBP17.12■□□□□ 0.33
TMEM53-205ENST00000372244 NMNAT2Q9BZQ4 307 aa17.12■□□□□ 0.33
TMEM53-205ENST00000372244 OR2J1Q9GZK6 312 aa17.12■□□□□ 0.33
TMEM53-205ENST00000372244 TPK1Q9H3S4 243 aa17.12■□□□□ 0.33
TMEM53-205ENST00000372244 FN3KQ9H479 309 aa17.12■□□□□ 0.33
TMEM53-205ENST00000372244 NTN4Q9HB63 628 aa17.12■□□□□ 0.33
TMEM53-205ENST00000372244 TUBG2Q9NRH3 451 aa17.12■□□□□ 0.33
TMEM53-205ENST00000372244 ARMC1Q9NVT9 282 aa17.12■□□□□ 0.33
TMEM53-205ENST00000372244 PDP1Q9P0J1 537 aaPredicted RBP17.12■□□□□ 0.33
TMEM53-205ENST00000372244 CYB5R1Q9UHQ9 305 aa17.12■□□□□ 0.33
TMEM53-205ENST00000372244 A0A1W2PPW3 197 aa17.12■□□□□ 0.33
TMEM53-205ENST00000372244 USF1P22415 310 aaPredicted RBP17.12■□□□□ 0.33
TMEM53-205ENST00000372244 GGT2P36268 569 aa17.12■□□□□ 0.33
TMEM53-205ENST00000372244 PPP1CBP62140 327 aa17.12■□□□□ 0.33
TMEM53-205ENST00000372244 RSPO1Q2MKA7 263 aaPredicted RBP17.12■□□□□ 0.33
TMEM53-205ENST00000372244 TMEM255AQ5JRV8 349 aa17.12■□□□□ 0.33
TMEM53-205ENST00000372244 SLC37A3Q8NCC5 494 aa17.12■□□□□ 0.33
TMEM53-205ENST00000372244 ICA1LQ8NDH6 482 aa17.12■□□□□ 0.33
TMEM53-205ENST00000372244 ZNF540Q8NDQ6 660 aa17.12■□□□□ 0.33
TMEM53-205ENST00000372244 ABHD4Q8TB40 342 aa17.12■□□□□ 0.33
TMEM53-205ENST00000372244 SLC25A40Q8TBP6 338 aa17.12■□□□□ 0.33
TMEM53-205ENST00000372244 ZNRF4Q8WWF5 429 aa17.12■□□□□ 0.33
TMEM53-205ENST00000372244 SLC7A6Q92536 515 aa17.12■□□□□ 0.33
TMEM53-205ENST00000372244 PIMREGQ9BSJ6 248 aa17.12■□□□□ 0.33
TMEM53-205ENST00000372244 HINT3Q9NQE9 182 aaKnown RBP17.12■□□□□ 0.33
TMEM53-205ENST00000372244 MRPL22Q9NWU5 206 aaKnown RBP17.12■□□□□ 0.33
TMEM53-205ENST00000372244 KLHL21Q9UJP4 597 aa17.12■□□□□ 0.33
TMEM53-205ENST00000372244 CHD3Q12873 2000 aaKnown RBP17.11■□□□□ 0.33
TMEM53-205ENST00000372244 C17orf100A8MU93 164 aa17.11■□□□□ 0.33
TMEM53-205ENST00000372244 H3BSA7 217 aa17.11■□□□□ 0.33
TMEM53-205ENST00000372244 HPXP02790 462 aa17.11■□□□□ 0.33
TMEM53-205ENST00000372244 MPV17P39210 176 aa17.11■□□□□ 0.33
TMEM53-205ENST00000372244 ERFP50548 548 aa17.11■□□□□ 0.33
TMEM53-205ENST00000372244 ARHGDIAP52565 204 aa17.11■□□□□ 0.33
TMEM53-205ENST00000372244 RIN1Q13671 783 aa17.11■□□□□ 0.33
TMEM53-205ENST00000372244 NKPD1Q17RQ9 610 aa17.11■□□□□ 0.33
TMEM53-205ENST00000372244 SLC36A3Q495N2 470 aa17.11■□□□□ 0.33
TMEM53-205ENST00000372244 ELFN2Q5R3F8 820 aa17.11■□□□□ 0.33
TMEM53-205ENST00000372244 SPATA46Q5T0L3 261 aa17.11■□□□□ 0.33
TMEM53-205ENST00000372244 SLC18B1Q6NT16 456 aa17.11■□□□□ 0.33
TMEM53-205ENST00000372244 CORO6Q6QEF8 472 aa17.11■□□□□ 0.33
TMEM53-205ENST00000372244 HS3ST5Q8IZT8 346 aa17.11■□□□□ 0.33
TMEM53-205ENST00000372244 OR2T4Q8NH00 348 aa17.11■□□□□ 0.33
TMEM53-205ENST00000372244 UTP4Q969X6 686 aaKnown RBP17.11■□□□□ 0.33
TMEM53-205ENST00000372244 NKIRAS2Q9NYR9 191 aa17.11■□□□□ 0.33
TMEM53-205ENST00000372244 ABHD16AO95870 558 aa17.1■□□□□ 0.33
TMEM53-205ENST00000372244 PRKACGP22612 351 aa17.1■□□□□ 0.33
TMEM53-205ENST00000372244 GCH1P30793 250 aa17.1■□□□□ 0.33
TMEM53-205ENST00000372244 MMP15P51511 669 aa17.1■□□□□ 0.33
TMEM53-205ENST00000372244 SLC25A1P53007 311 aa17.1■□□□□ 0.33
TMEM53-205ENST00000372244 MRPS11P82912 194 aaKnown RBP17.1■□□□□ 0.33
TMEM53-205ENST00000372244 TMEM249Q2WGJ8 235 aa17.1■□□□□ 0.33
TMEM53-205ENST00000372244 ALKBH6Q3KRA9 238 aa17.1■□□□□ 0.33
TMEM53-205ENST00000372244 KRTAP27-1Q3LI81 207 aa17.1■□□□□ 0.33
TMEM53-205ENST00000372244 NRBF2Q96F24 287 aa17.1■□□□□ 0.33
TMEM53-205ENST00000372244 DCLRE1CQ96SD1 692 aaKnown RBP17.1■□□□□ 0.33
TMEM53-205ENST00000372244 COQ7Q99807 217 aa17.1■□□□□ 0.33
TMEM53-205ENST00000372244 HDHD2Q9H0R4 259 aa17.1■□□□□ 0.33
TMEM53-205ENST00000372244 CMC2Q9NRP2 79 aa17.1■□□□□ 0.33
TMEM53-205ENST00000372244 POLR1DQ9Y2S0 133 aa17.1■□□□□ 0.33
TMEM53-205ENST00000372244 STARD10Q9Y365 291 aa17.1■□□□□ 0.33
TMEM53-205ENST00000372244 GRIP1Q9Y3R0 1128 aa17.1■□□□□ 0.33
TMEM53-205ENST00000372244 JMJD1CQ15652 2540 aa17.1■□□□□ 0.33
TMEM53-205ENST00000372244 YLPM1P49750 1951 aaKnown RBP17.09■□□□□ 0.33
TMEM53-205ENST00000372244 CD5LO43866 347 aa17.09■□□□□ 0.33
TMEM53-205ENST00000372244 E2F6O75461 281 aa17.09■□□□□ 0.33
TMEM53-205ENST00000372244 DBHP09172 617 aa17.09■□□□□ 0.33
TMEM53-205ENST00000372244 ANXA8P13928 327 aa17.09■□□□□ 0.33
TMEM53-205ENST00000372244 COL8A2P25067 703 aa17.09■□□□□ 0.33
TMEM53-205ENST00000372244 PYCR1P32322 319 aa17.09■□□□□ 0.33
TMEM53-205ENST00000372244 CRMP1Q14194 572 aa17.09■□□□□ 0.33
TMEM53-205ENST00000372244 CARTPTQ16568 116 aa17.09■□□□□ 0.33
TMEM53-205ENST00000372244 ASRGL1Q7L266 308 aa17.09■□□□□ 0.33
TMEM53-205ENST00000372244 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.09■□□□□ 0.33
TMEM53-205ENST00000372244 IPCEF1Q8WWN9 437 aaPredicted RBP17.09■□□□□ 0.33
TMEM53-205ENST00000372244 DUS3LQ96G46 650 aaKnown RBP17.09■□□□□ 0.33
TMEM53-205ENST00000372244 POM121Q96HA1 1249 aa17.09■□□□□ 0.33
TMEM53-205ENST00000372244 CDADC1Q9BWV3 514 aa17.09■□□□□ 0.33
TMEM53-205ENST00000372244 KCNG2Q9UJ96 466 aa17.09■□□□□ 0.33
TMEM53-205ENST00000372244 LYNX1G3V0Z9 82 aa17.08■□□□□ 0.32
TMEM53-205ENST00000372244 J3QW42 95 aa17.08■□□□□ 0.32
TMEM53-205ENST00000372244 NCR1O76036 304 aa17.08■□□□□ 0.32
TMEM53-205ENST00000372244 HLA-DQA2P01906 255 aa17.08■□□□□ 0.32
TMEM53-205ENST00000372244 LYNX1P0DP58 116 aa17.08■□□□□ 0.32
TMEM53-205ENST00000372244 PSG7Q13046 419 aa17.08■□□□□ 0.32
TMEM53-205ENST00000372244 PCK2Q16822 640 aa17.08■□□□□ 0.32
TMEM53-205ENST00000372244 PCGF3Q3KNV8 242 aa17.08■□□□□ 0.32
TMEM53-205ENST00000372244 SHQ1Q6PI26 577 aaKnown RBP17.08■□□□□ 0.32
TMEM53-205ENST00000372244 PROKR2Q8NFJ6 384 aa17.08■□□□□ 0.32
TMEM53-205ENST00000372244 TEX47Q8TBZ9 253 aa17.08■□□□□ 0.32
TMEM53-205ENST00000372244 RDH5Q92781 318 aa17.08■□□□□ 0.32
TMEM53-205ENST00000372244 BPESC1Q9GZL8 116 aa17.08■□□□□ 0.32
TMEM53-205ENST00000372244 PNRC2Q9NPJ4 139 aaKnown RBP17.08■□□□□ 0.32
TMEM53-205ENST00000372244 IGHV4-61A0A0C4DH41 118 aa17.07■□□□□ 0.32
TMEM53-205ENST00000372244 DEAF1O75398 565 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms