RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 APOBEC4Q8WW27 367 aaKnown RBP10.05□□□□□ -0.8
SHANK2-219ENST00000606715 RAB1BQ9H0U4 201 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 ARPC5O15511 151 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 NID1P14543 1247 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 SERPINF1P36955 418 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 NKX2-5P52952 324 aaPredicted RBP10.05□□□□□ -0.8
SHANK2-219ENST00000606715 MEP1BQ16820 701 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 RETREG3Q86VR2 466 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 ZNF573Q86YE8 665 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 SUMF2Q8NBJ7 301 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 OR2A1Q8NGT9 310 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 TTC9Q92623 222 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 MRGPRX3Q96LB0 322 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 ZNF75AQ96N20 296 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 ZNF251Q9BRH9 671 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 FUNDC2Q9BWH2 189 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 BARX1Q9HBU1 254 aaPredicted RBP10.05□□□□□ -0.8
SHANK2-219ENST00000606715 NECAP2Q9NVZ3 263 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 NUBP2Q9Y5Y2 271 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 CDX4O14627 284 aaPredicted RBP10.05□□□□□ -0.8
SHANK2-219ENST00000606715 LYRM1O43325 122 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 HLA-AP01891 365 aaKnown RBP10.05□□□□□ -0.8
SHANK2-219ENST00000606715 RAB40ALP0C0E4 278 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 RAB6AP20340 208 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 PNLIPRP2P54317 469 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 SLC35A2P78381 396 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 ZXDAP98168 799 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 COL13A1Q5TAT6 717 aaPredicted RBP10.05□□□□□ -0.8
SHANK2-219ENST00000606715 GUSBP11Q6P575 273 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 DPPA2Q7Z7J5 298 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 OR2V1Q8NHB1 315 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 RAB40AQ8WXH6 277 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 NDFIP1Q9BT67 221 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 PLA2G2FQ9BZM2 168 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 LHPPQ9H008 270 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 BCO1Q9HAY6 547 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 EMC7Q9NPA0 242 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 P4HTMQ9NXG6 502 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 IGHV3-15A0A0B4J1V0 119 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 LINC01387J3KSC0 135 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 ACOT8O14734 319 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 TOX3O15405 576 aaPredicted RBP10.05□□□□□ -0.8
SHANK2-219ENST00000606715 PHF1O43189 567 aaPredicted RBP10.05□□□□□ -0.8
SHANK2-219ENST00000606715 HLA-DOBP13765 273 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 UBE2NLQ5JXB2 153 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 DOK3Q7L591 496 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 LSRQ86X29 649 aaPredicted RBP10.05□□□□□ -0.8
SHANK2-219ENST00000606715 SLC16A11Q8NCK7 471 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 ST8SIA2Q92186 375 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 HYLS1Q96M11 299 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 LAT2Q9GZY6 243 aa10.05□□□□□ -0.8
SHANK2-219ENST00000606715 SBF2Q86WG5 1849 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 COL4A5P29400 1685 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 IGLV3-16A0A075B6K0 115 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 KIR2DS1A0A191URI9 304 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 A0A1W2PR48 441 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 PRAF2O60831 178 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 PEX11BO96011 259 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 CT45A10P0DMU9 189 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 MGST1P10620 155 aaKnown RBP10.04□□□□□ -0.8
SHANK2-219ENST00000606715 TPT1P13693 172 aaKnown RBP10.04□□□□□ -0.8
SHANK2-219ENST00000606715 COX6B1P14854 86 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 KIR2DS4P43632 304 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 RBP2P50120 134 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 MEOX1P50221 254 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 MRPS34P82930 218 aaKnown RBP10.04□□□□□ -0.8
SHANK2-219ENST00000606715 KIR2DS1Q14954 304 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 TBCEQ15813 527 aaPredicted RBP10.04□□□□□ -0.8
SHANK2-219ENST00000606715 TATDN3Q17R31 274 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 FAM109BQ6ICB4 259 aaPredicted RBP10.04□□□□□ -0.8
SHANK2-219ENST00000606715 SLCO4A1Q96BD0 722 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 ZNF195O14628 629 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 TXNL1O43396 289 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 SUMO3P55854 103 aaPredicted RBP10.04□□□□□ -0.8
SHANK2-219ENST00000606715 MLLT11Q13015 90 aaPredicted RBP10.04□□□□□ -0.8
SHANK2-219ENST00000606715 SELPLGQ14242 412 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 GK2Q14410 553 aaPredicted RBP10.04□□□□□ -0.8
SHANK2-219ENST00000606715 ZNF628Q5EBL2 1059 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 ZNF691Q5VV52 312 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 TSEN54Q7Z6J9 526 aaKnown RBP10.04□□□□□ -0.8
SHANK2-219ENST00000606715 C20orf27Q9GZN8 174 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 GON4LQ3T8J9 2241 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 ACOD1A6NK06 481 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 TNFRSF10AO00220 468 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 UBBP0CG47 229 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 ZNF74Q16587 644 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 NXNL2Q5VZ03 156 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 TCTN3Q6NUS6 607 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 TMEM65Q6PI78 240 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 OGFOD3Q6PK18 319 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 BPIFCQ8NFQ6 507 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 DEDD2Q8WXF8 326 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 PINX1Q96BK5 328 aaKnown RBP10.04□□□□□ -0.8
SHANK2-219ENST00000606715 THAP7Q9BT49 309 aaPredicted RBP10.04□□□□□ -0.8
SHANK2-219ENST00000606715 COMMD5Q9GZQ3 224 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.04□□□□□ -0.8
SHANK2-219ENST00000606715 MYO5AQ9Y4I1 1855 aaKnown RBP10.04□□□□□ -0.8
SHANK2-219ENST00000606715 IGHV1OR15-9A0A0B4J2B8 117 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 BOLA2-SMG1P6H3BVE0 249 aa10.04□□□□□ -0.8
SHANK2-219ENST00000606715 ARPC3O15145 178 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 190.3 ms