RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 FBXO9Q9UK97 447 aaPredicted RBP10.69□□□□□ -0.7
SMAD3-208ENST00000558827 KCNS2Q9ULS6 477 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 GRIP1Q9Y3R0 1128 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 DNHD1Q96M86 4753 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 DCTN6O00399 190 aa10.68□□□□□ -0.7
SMAD3-208ENST00000558827 DOK2O60496 412 aa10.68□□□□□ -0.7
SMAD3-208ENST00000558827 SNAP29O95721 258 aa10.68□□□□□ -0.7
SMAD3-208ENST00000558827 DBHP09172 617 aa10.68□□□□□ -0.7
SMAD3-208ENST00000558827 ITGA2P17301 1181 aa10.68□□□□□ -0.7
SMAD3-208ENST00000558827 SDHAP31040 664 aa10.68□□□□□ -0.7
SMAD3-208ENST00000558827 CHN2P52757 468 aa10.68□□□□□ -0.7
SMAD3-208ENST00000558827 PCBD1P61457 104 aa10.68□□□□□ -0.7
SMAD3-208ENST00000558827 FAM120AOSQ5T036 256 aa10.68□□□□□ -0.7
SMAD3-208ENST00000558827 LEG1Q6P5S2 330 aa10.68□□□□□ -0.7
SMAD3-208ENST00000558827 CORO6Q6QEF8 472 aa10.68□□□□□ -0.7
SMAD3-208ENST00000558827 SMARCD3Q6STE5 483 aa10.68□□□□□ -0.7
SMAD3-208ENST00000558827 OR9Q2Q8NGE9 314 aa10.68□□□□□ -0.7
SMAD3-208ENST00000558827 FNDC8Q8TC99 324 aa10.68□□□□□ -0.7
SMAD3-208ENST00000558827 KLF14Q8TD94 323 aaPredicted RBP10.68□□□□□ -0.7
SMAD3-208ENST00000558827 MARS2Q96GW9 593 aaKnown RBP10.68□□□□□ -0.7
SMAD3-208ENST00000558827 C4orf45Q96LM5 186 aa10.68□□□□□ -0.7
SMAD3-208ENST00000558827 NMNAT3Q96T66 252 aa10.68□□□□□ -0.7
SMAD3-208ENST00000558827 IFT27Q9BW83 186 aa10.68□□□□□ -0.7
SMAD3-208ENST00000558827 NDEL1Q9GZM8 345 aa10.68□□□□□ -0.7
SMAD3-208ENST00000558827 OR52D1Q9H346 318 aa10.68□□□□□ -0.7
SMAD3-208ENST00000558827 MSL2Q9HCI7 577 aa10.68□□□□□ -0.7
SMAD3-208ENST00000558827 TMCC3Q9ULS5 477 aa10.68□□□□□ -0.7
SMAD3-208ENST00000558827 POLR1DQ9Y2S0 133 aa10.68□□□□□ -0.7
SMAD3-208ENST00000558827 IGLV3-9A0A075B6K5 115 aa10.67□□□□□ -0.7
SMAD3-208ENST00000558827 RER1O15258 196 aa10.67□□□□□ -0.7
SMAD3-208ENST00000558827 SGCEO43556 437 aa10.67□□□□□ -0.7
SMAD3-208ENST00000558827 ABHD16AO95870 558 aa10.67□□□□□ -0.7
SMAD3-208ENST00000558827 TACSTD2P09758 323 aa10.67□□□□□ -0.7
SMAD3-208ENST00000558827 ZNF81P51508 661 aa10.67□□□□□ -0.7
SMAD3-208ENST00000558827 RPS6KA3P51812 740 aa10.67□□□□□ -0.7
SMAD3-208ENST00000558827 SMIM11AP58511 58 aa10.67□□□□□ -0.7
SMAD3-208ENST00000558827 CR1LQ2VPA4 569 aa10.67□□□□□ -0.7
SMAD3-208ENST00000558827 RFX4Q33E94 735 aa10.67□□□□□ -0.7
SMAD3-208ENST00000558827 CLEC12AQ5QGZ9 265 aa10.67□□□□□ -0.7
SMAD3-208ENST00000558827 GPR139Q6DWJ6 353 aa10.67□□□□□ -0.7
SMAD3-208ENST00000558827 DPY19L2P2Q6ZN68 376 aa10.67□□□□□ -0.7
SMAD3-208ENST00000558827 USP51Q70EK9 711 aa10.67□□□□□ -0.7
SMAD3-208ENST00000558827 VASH1Q7L8A9 365 aaPredicted RBP10.67□□□□□ -0.7
SMAD3-208ENST00000558827 CLDND2Q8NHS1 167 aa10.67□□□□□ -0.7
SMAD3-208ENST00000558827 CLPTM1LQ96KA5 538 aa10.67□□□□□ -0.7
SMAD3-208ENST00000558827 EGLN3Q9H6Z9 239 aa10.67□□□□□ -0.7
SMAD3-208ENST00000558827 KRCC1Q9NPI7 259 aaPredicted RBP10.67□□□□□ -0.7
SMAD3-208ENST00000558827 DECR2Q9NUI1 292 aa10.67□□□□□ -0.7
SMAD3-208ENST00000558827 SLCO1C1Q9NYB5 712 aa10.67□□□□□ -0.7
SMAD3-208ENST00000558827 PLEK2Q9NYT0 353 aa10.67□□□□□ -0.7
SMAD3-208ENST00000558827 ASH2LQ9UBL3 628 aa10.67□□□□□ -0.7
SMAD3-208ENST00000558827 GPR160Q9UJ42 338 aa10.67□□□□□ -0.7
SMAD3-208ENST00000558827 STARD10Q9Y365 291 aa10.67□□□□□ -0.7
SMAD3-208ENST00000558827 ARHGAP32A7KAX9 2087 aa10.67□□□□□ -0.7
SMAD3-208ENST00000558827 ZSCAN5BA6NJL1 495 aa10.66□□□□□ -0.7
SMAD3-208ENST00000558827 RNF212BA8MTL3 300 aa10.66□□□□□ -0.7
SMAD3-208ENST00000558827 FAM157AC9JC47 383 aa10.66□□□□□ -0.7
SMAD3-208ENST00000558827 TNFRSF11BO00300 401 aa10.66□□□□□ -0.7
SMAD3-208ENST00000558827 TIMM8AO60220 97 aaPredicted RBP10.66□□□□□ -0.7
SMAD3-208ENST00000558827 RP2O75695 350 aa10.66□□□□□ -0.7
SMAD3-208ENST00000558827 IGHV1-46P01743 117 aa10.66□□□□□ -0.7
SMAD3-208ENST00000558827 IGHV3-13P01766 116 aa10.66□□□□□ -0.7
SMAD3-208ENST00000558827 HIST1H1CP16403 213 aaKnown RBP10.66□□□□□ -0.7
SMAD3-208ENST00000558827 ACHEP22303 614 aa10.66□□□□□ -0.7
SMAD3-208ENST00000558827 ERFP50548 548 aa10.66□□□□□ -0.7
SMAD3-208ENST00000558827 PRSS12P56730 875 aa10.66□□□□□ -0.7
SMAD3-208ENST00000558827 MS4A2Q01362 244 aa10.66□□□□□ -0.7
SMAD3-208ENST00000558827 SCRN3Q0VDG4 424 aa10.66□□□□□ -0.7
SMAD3-208ENST00000558827 CCDC92Q53HC0 331 aaPredicted RBP10.66□□□□□ -0.7
SMAD3-208ENST00000558827 PGBD2Q6P3X8 592 aa10.66□□□□□ -0.7
SMAD3-208ENST00000558827 JAZF1Q86VZ6 243 aa10.66□□□□□ -0.7
SMAD3-208ENST00000558827 LINC00346Q8IVM7 164 aa10.66□□□□□ -0.7
SMAD3-208ENST00000558827 GLB1L2Q8IW92 636 aa10.66□□□□□ -0.7
SMAD3-208ENST00000558827 CCDC197Q8NCU1 140 aa10.66□□□□□ -0.7
SMAD3-208ENST00000558827 SDR9C7Q8NEX9 313 aa10.66□□□□□ -0.7
SMAD3-208ENST00000558827 OR52E2Q8NGJ4 325 aa10.66□□□□□ -0.7
SMAD3-208ENST00000558827 GNPDA2Q8TDQ7 276 aa10.66□□□□□ -0.7
SMAD3-208ENST00000558827 IL1RAPQ9NPH3 570 aa10.66□□□□□ -0.7
SMAD3-208ENST00000558827 RPRD1BQ9NQG5 326 aaKnown RBP10.66□□□□□ -0.7
SMAD3-208ENST00000558827 DCAF16Q9NXF7 216 aa10.66□□□□□ -0.7
SMAD3-208ENST00000558827 VNN3Q9NY84 501 aa10.66□□□□□ -0.7
SMAD3-208ENST00000558827 VSX1Q9NZR4 365 aaPredicted RBP10.66□□□□□ -0.7
SMAD3-208ENST00000558827 CDC42EP3Q9UKI2 254 aa10.66□□□□□ -0.7
SMAD3-208ENST00000558827 B9D1Q9UPM9 204 aa10.66□□□□□ -0.7
SMAD3-208ENST00000558827 WNK2Q9Y3S1 2297 aa10.66□□□□□ -0.7
SMAD3-208ENST00000558827 CUBNO60494 3623 aa10.66□□□□□ -0.7
SMAD3-208ENST00000558827 MXRA5Q9NR99 2828 aa10.66□□□□□ -0.7
SMAD3-208ENST00000558827 IGHV1-69-2A0A0G2JMI3 117 aa10.65□□□□□ -0.7
SMAD3-208ENST00000558827 RENP00797 406 aa10.65□□□□□ -0.7
SMAD3-208ENST00000558827 IFNA2P01563 188 aa10.65□□□□□ -0.7
SMAD3-208ENST00000558827 FAM157CP0CG43 387 aa10.65□□□□□ -0.7
SMAD3-208ENST00000558827 T-ENOLP0DO92 83 aa10.65□□□□□ -0.7
SMAD3-208ENST00000558827 SRD5A1P18405 259 aa10.65□□□□□ -0.7
SMAD3-208ENST00000558827 NOS3P29474 1203 aa10.65□□□□□ -0.7
SMAD3-208ENST00000558827 SLC6A6P31641 620 aa10.65□□□□□ -0.7
SMAD3-208ENST00000558827 PYCR1P32322 319 aa10.65□□□□□ -0.7
SMAD3-208ENST00000558827 GSSP48637 474 aa10.65□□□□□ -0.7
SMAD3-208ENST00000558827 ARHGDIAP52565 204 aa10.65□□□□□ -0.7
SMAD3-208ENST00000558827 PSG7Q13046 419 aa10.65□□□□□ -0.7
SMAD3-208ENST00000558827 HLXQ14774 488 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms