RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 BEX1Q9HBH7 125 aa16.39■□□□□ 0.22
POLR2J3-205ENST00000489144 UBQLN4Q9NRR5 601 aa16.39■□□□□ 0.22
POLR2J3-205ENST00000489144 MGAT4CQ9UBM8 478 aa16.39■□□□□ 0.22
POLR2J3-205ENST00000489144 ZNF629Q9UEG4 869 aaPredicted RBP16.39■□□□□ 0.22
POLR2J3-205ENST00000489144 TESQ9UGI8 421 aaKnown RBP16.39■□□□□ 0.22
POLR2J3-205ENST00000489144 LHX6Q9UPM6 363 aa16.39■□□□□ 0.22
POLR2J3-205ENST00000489144 CXorf65A6NEN9 183 aa16.39■□□□□ 0.21
POLR2J3-205ENST00000489144 PRR23D1E9PI22 279 aaPredicted RBP16.39■□□□□ 0.21
POLR2J3-205ENST00000489144 SPDEFO95238 335 aa16.39■□□□□ 0.21
POLR2J3-205ENST00000489144 IGF2P01344 180 aa16.39■□□□□ 0.21
POLR2J3-205ENST00000489144 UMODP07911 640 aa16.39■□□□□ 0.21
POLR2J3-205ENST00000489144 PRR23D2P0DMB1 279 aaPredicted RBP16.39■□□□□ 0.21
POLR2J3-205ENST00000489144 CLN3Q13286 438 aa16.39■□□□□ 0.21
POLR2J3-205ENST00000489144 PYY3Q5JQD4 70 aa16.39■□□□□ 0.21
POLR2J3-205ENST00000489144 SMARCD3Q6STE5 483 aa16.39■□□□□ 0.21
POLR2J3-205ENST00000489144 ETV3LQ6ZN32 361 aa16.39■□□□□ 0.21
POLR2J3-205ENST00000489144 OR6K3Q8NGY3 331 aa16.39■□□□□ 0.21
POLR2J3-205ENST00000489144 GNPDA2Q8TDQ7 276 aa16.39■□□□□ 0.21
POLR2J3-205ENST00000489144 SAMD8Q96LT4 415 aa16.39■□□□□ 0.21
POLR2J3-205ENST00000489144 UNKLQ9H9P5 680 aaKnown RBP16.39■□□□□ 0.21
POLR2J3-205ENST00000489144 MED12Q93074 2177 aa16.39■□□□□ 0.21
POLR2J3-205ENST00000489144 A0A0B4J2E0 115 aa16.38■□□□□ 0.21
POLR2J3-205ENST00000489144 A0A1B0GX12 115 aa16.38■□□□□ 0.21
POLR2J3-205ENST00000489144 HCRTR2O43614 444 aa16.38■□□□□ 0.21
POLR2J3-205ENST00000489144 GATBO75879 557 aaKnown RBP16.38■□□□□ 0.21
POLR2J3-205ENST00000489144 STK17BO94768 372 aa16.38■□□□□ 0.21
POLR2J3-205ENST00000489144 BLOC1S1P78537 153 aa16.38■□□□□ 0.21
POLR2J3-205ENST00000489144 MELKQ14680 651 aa16.38■□□□□ 0.21
POLR2J3-205ENST00000489144 ZNF613Q6PF04 617 aa16.38■□□□□ 0.21
POLR2J3-205ENST00000489144 POGLUT1Q8NBL1 392 aa16.38■□□□□ 0.21
POLR2J3-205ENST00000489144 TSSK6Q9BXA6 273 aa16.38■□□□□ 0.21
POLR2J3-205ENST00000489144 SDK2Q58EX2 2172 aa16.38■□□□□ 0.21
POLR2J3-205ENST00000489144 A0A087X0M5 115 aa16.38■□□□□ 0.21
POLR2J3-205ENST00000489144 A0A1B0GX30 115 aa16.38■□□□□ 0.21
POLR2J3-205ENST00000489144 OR2M5A3KFT3 312 aa16.38■□□□□ 0.21
POLR2J3-205ENST00000489144 OR2A4O95047 310 aa16.38■□□□□ 0.21
POLR2J3-205ENST00000489144 RAB3DO95716 219 aa16.38■□□□□ 0.21
POLR2J3-205ENST00000489144 NUDT14O95848 222 aa16.38■□□□□ 0.21
POLR2J3-205ENST00000489144 SBK2P0C263 348 aa16.38■□□□□ 0.21
POLR2J3-205ENST00000489144 NQO2P16083 231 aa16.38■□□□□ 0.21
POLR2J3-205ENST00000489144 FOXO1Q12778 655 aa16.38■□□□□ 0.21
POLR2J3-205ENST00000489144 BIKQ13323 160 aa16.38■□□□□ 0.21
POLR2J3-205ENST00000489144 TRA2AQ13595 282 aaKnown RBP eCLIP16.38■□□□□ 0.21
POLR2J3-205ENST00000489144 Q6ZTK2 550 aa16.38■□□□□ 0.21
POLR2J3-205ENST00000489144 OR4Q3Q8NH05 313 aa16.38■□□□□ 0.21
POLR2J3-205ENST00000489144 S100PBPQ96BU1 408 aa16.38■□□□□ 0.21
POLR2J3-205ENST00000489144 OR2A7Q96R45 310 aa16.38■□□□□ 0.21
POLR2J3-205ENST00000489144 LPAR4Q99677 370 aa16.38■□□□□ 0.21
POLR2J3-205ENST00000489144 ISYNA1Q9NPH2 558 aa16.38■□□□□ 0.21
POLR2J3-205ENST00000489144 PRAF2O60831 178 aa16.37■□□□□ 0.21
POLR2J3-205ENST00000489144 SC5DO75845 299 aa16.37■□□□□ 0.21
POLR2J3-205ENST00000489144 IFNA2P01563 188 aa16.37■□□□□ 0.21
POLR2J3-205ENST00000489144 ITPKBP27987 946 aa16.37■□□□□ 0.21
POLR2J3-205ENST00000489144 FGF9P31371 208 aaPredicted RBP16.37■□□□□ 0.21
POLR2J3-205ENST00000489144 GIPRP48546 466 aa16.37■□□□□ 0.21
POLR2J3-205ENST00000489144 ZNF117Q03924 483 aa16.37■□□□□ 0.21
POLR2J3-205ENST00000489144 TSPAN31Q12999 210 aa16.37■□□□□ 0.21
POLR2J3-205ENST00000489144 B3GLCTQ6Y288 498 aa16.37■□□□□ 0.21
POLR2J3-205ENST00000489144 TIPARPQ7Z3E1 657 aaKnown RBP16.37■□□□□ 0.21
POLR2J3-205ENST00000489144 WNT2BQ93097 391 aa16.37■□□□□ 0.21
POLR2J3-205ENST00000489144 CYSLTR2Q9NS75 346 aa16.37■□□□□ 0.21
POLR2J3-205ENST00000489144 FOXJ2Q9P0K8 574 aa16.37■□□□□ 0.21
POLR2J3-205ENST00000489144 YARS2Q9Y2Z4 477 aaKnown RBP16.37■□□□□ 0.21
POLR2J3-205ENST00000489144 CDC40O60508 579 aaKnown RBP eCLIP16.37■□□□□ 0.21
POLR2J3-205ENST00000489144 KLF7O75840 302 aaPredicted RBP16.37■□□□□ 0.21
POLR2J3-205ENST00000489144 JMJD7P0C870 316 aa16.37■□□□□ 0.21
POLR2J3-205ENST00000489144 RAC2P15153 192 aa16.37■□□□□ 0.21
POLR2J3-205ENST00000489144 ABOP16442 354 aa16.37■□□□□ 0.21
POLR2J3-205ENST00000489144 FXYD6P3P58550 94 aa16.37■□□□□ 0.21
POLR2J3-205ENST00000489144 RPS25P62851 125 aaKnown RBP16.37■□□□□ 0.21
POLR2J3-205ENST00000489144 BAIAP2L2Q6UXY1 529 aa16.37■□□□□ 0.21
POLR2J3-205ENST00000489144 TOMM5Q8N4H5 51 aa16.37■□□□□ 0.21
POLR2J3-205ENST00000489144 C15orf54Q8N8G6 183 aa16.37■□□□□ 0.21
POLR2J3-205ENST00000489144 BPIFA2Q96DR5 249 aa16.37■□□□□ 0.21
POLR2J3-205ENST00000489144 FAM183AA6NL82 134 aa16.36■□□□□ 0.21
POLR2J3-205ENST00000489144 AP4M1O00189 453 aa16.36■□□□□ 0.21
POLR2J3-205ENST00000489144 TSPAN2O60636 221 aa16.36■□□□□ 0.21
POLR2J3-205ENST00000489144 HIST1H1BP16401 226 aaKnown RBP16.36■□□□□ 0.21
POLR2J3-205ENST00000489144 RCC1P18754 421 aaPredicted RBP16.36■□□□□ 0.21
POLR2J3-205ENST00000489144 RAB5CP51148 216 aa16.36■□□□□ 0.21
POLR2J3-205ENST00000489144 ZNF239Q16600 458 aaKnown RBP16.36■□□□□ 0.21
POLR2J3-205ENST00000489144 ISXQ2M1V0 245 aa16.36■□□□□ 0.21
POLR2J3-205ENST00000489144 THSD4Q6ZMP0 1018 aa16.36■□□□□ 0.21
POLR2J3-205ENST00000489144 ZNF441Q8N8Z8 693 aa16.36■□□□□ 0.21
POLR2J3-205ENST00000489144 TBL1XR1Q9BZK7 514 aa16.36■□□□□ 0.21
POLR2J3-205ENST00000489144 SPIN1Q9Y657 262 aaPredicted RBP16.36■□□□□ 0.21
POLR2J3-205ENST00000489144 IMPA2O14732 288 aa16.36■□□□□ 0.21
POLR2J3-205ENST00000489144 OR2J2O76002 312 aa16.36■□□□□ 0.21
POLR2J3-205ENST00000489144 MAPK3P27361 379 aaPredicted RBP16.36■□□□□ 0.21
POLR2J3-205ENST00000489144 PITPNBP48739 271 aa16.36■□□□□ 0.21
POLR2J3-205ENST00000489144 TCF15Q12870 199 aa16.36■□□□□ 0.21
POLR2J3-205ENST00000489144 MAJINQ3KP22 176 aa16.36■□□□□ 0.21
POLR2J3-205ENST00000489144 DCAF12Q5T6F0 453 aa16.36■□□□□ 0.21
POLR2J3-205ENST00000489144 FNDC7Q5VTL7 733 aa16.36■□□□□ 0.21
POLR2J3-205ENST00000489144 POC1BQ8TC44 478 aa16.36■□□□□ 0.21
POLR2J3-205ENST00000489144 OSTF1Q92882 214 aa16.36■□□□□ 0.21
POLR2J3-205ENST00000489144 RAB3CQ96E17 227 aa16.36■□□□□ 0.21
POLR2J3-205ENST00000489144 TLNRD1Q9H1K6 362 aa16.36■□□□□ 0.21
POLR2J3-205ENST00000489144 SF3B6Q9Y3B4 125 aaKnown RBP16.36■□□□□ 0.21
POLR2J3-205ENST00000489144 COL5A1P20908 1838 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms