RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 POLR1DQ9Y2S0 133 aa16.82■□□□□ 0.28
PCOLCE-208ENST00000487172 RNF115Q9Y4L5 304 aa16.82■□□□□ 0.28
PCOLCE-208ENST00000487172 PTPN13Q12923 2485 aa16.82■□□□□ 0.28
PCOLCE-208ENST00000487172 ADGRG4Q8IZF6 3080 aa16.82■□□□□ 0.28
PCOLCE-208ENST00000487172 ZNF593O00488 134 aaPredicted RBP16.81■□□□□ 0.28
PCOLCE-208ENST00000487172 ABCD4O14678 606 aa16.81■□□□□ 0.28
PCOLCE-208ENST00000487172 SGCEO43556 437 aa16.81■□□□□ 0.28
PCOLCE-208ENST00000487172 CRYAAP02489 173 aa16.81■□□□□ 0.28
PCOLCE-208ENST00000487172 RPS7P62081 194 aaKnown RBP16.81■□□□□ 0.28
PCOLCE-208ENST00000487172 GGTLC2Q14390 218 aa16.81■□□□□ 0.28
PCOLCE-208ENST00000487172 CCDC92Q53HC0 331 aaPredicted RBP16.81■□□□□ 0.28
PCOLCE-208ENST00000487172 ZNF691Q5VV52 312 aa16.81■□□□□ 0.28
PCOLCE-208ENST00000487172 ADAM5Q6NVV9 412 aa16.81■□□□□ 0.28
PCOLCE-208ENST00000487172 SHFQ7M4L6 423 aa16.81■□□□□ 0.28
PCOLCE-208ENST00000487172 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.81■□□□□ 0.28
PCOLCE-208ENST00000487172 MYPOPQ86VE0 399 aaPredicted RBP16.81■□□□□ 0.28
PCOLCE-208ENST00000487172 CPEB3Q8NE35 698 aaKnown RBP16.81■□□□□ 0.28
PCOLCE-208ENST00000487172 OR1J2Q8NGS2 313 aa16.81■□□□□ 0.28
PCOLCE-208ENST00000487172 OR2AJ1Q8NGZ0 328 aa16.81■□□□□ 0.28
PCOLCE-208ENST00000487172 AKR7LQ8NHP1 331 aa16.81■□□□□ 0.28
PCOLCE-208ENST00000487172 CYGBQ8WWM9 190 aa16.81■□□□□ 0.28
PCOLCE-208ENST00000487172 RFKQ969G6 155 aa16.81■□□□□ 0.28
PCOLCE-208ENST00000487172 MS4A3Q96HJ5 214 aa16.81■□□□□ 0.28
PCOLCE-208ENST00000487172 WARS2Q9UGM6 360 aaKnown RBP16.81■□□□□ 0.28
PCOLCE-208ENST00000487172 ATPIF1Q9UII2 106 aa16.81■□□□□ 0.28
PCOLCE-208ENST00000487172 GDF2Q9UK05 429 aaPredicted RBP16.81■□□□□ 0.28
PCOLCE-208ENST00000487172 HEATR1Q9H583 2144 aaKnown RBP16.81■□□□□ 0.28
PCOLCE-208ENST00000487172 RER1O15258 196 aa16.8■□□□□ 0.28
PCOLCE-208ENST00000487172 ZNF35P13682 527 aa16.8■□□□□ 0.28
PCOLCE-208ENST00000487172 HTR1FP30939 366 aa16.8■□□□□ 0.28
PCOLCE-208ENST00000487172 APLNRP35414 380 aa16.8■□□□□ 0.28
PCOLCE-208ENST00000487172 CAPGP40121 348 aa16.8■□□□□ 0.28
PCOLCE-208ENST00000487172 CDH11P55287 796 aa16.8■□□□□ 0.28
PCOLCE-208ENST00000487172 FBXW10Q5XX13 1052 aa16.8■□□□□ 0.28
PCOLCE-208ENST00000487172 ZNF774Q6NX45 483 aa16.8■□□□□ 0.28
PCOLCE-208ENST00000487172 B3GLCTQ6Y288 498 aa16.8■□□□□ 0.28
PCOLCE-208ENST00000487172 VASH1Q7L8A9 365 aaPredicted RBP16.8■□□□□ 0.28
PCOLCE-208ENST00000487172 ERI1Q8IV48 349 aaKnown RBP16.8■□□□□ 0.28
PCOLCE-208ENST00000487172 SLC30A7Q8NEW0 376 aa16.8■□□□□ 0.28
PCOLCE-208ENST00000487172 TFAP2CQ92754 450 aa16.8■□□□□ 0.28
PCOLCE-208ENST00000487172 ZNF582Q96NG8 517 aaPredicted RBP16.8■□□□□ 0.28
PCOLCE-208ENST00000487172 PLEK2Q9NYT0 353 aa16.8■□□□□ 0.28
PCOLCE-208ENST00000487172 HSPE1-MOB4S4R3N1 261 aa16.8■□□□□ 0.28
PCOLCE-208ENST00000487172 BAHCC1Q9P281 2608 aa16.8■□□□□ 0.28
PCOLCE-208ENST00000487172 IGHV2OR16-5A0A0B4J2B6 119 aa16.79■□□□□ 0.28
PCOLCE-208ENST00000487172 A0A1W2PPR1 153 aa16.79■□□□□ 0.28
PCOLCE-208ENST00000487172 SHISA9B4DS77 424 aa16.79■□□□□ 0.28
PCOLCE-208ENST00000487172 SYNGR3O43761 229 aa16.79■□□□□ 0.28
PCOLCE-208ENST00000487172 PLAUP00749 431 aa16.79■□□□□ 0.28
PCOLCE-208ENST00000487172 STOMP27105 288 aa16.79■□□□□ 0.28
PCOLCE-208ENST00000487172 APEX1P27695 318 aaKnown RBP16.79■□□□□ 0.28
PCOLCE-208ENST00000487172 AQP4P55087 323 aa16.79■□□□□ 0.28
PCOLCE-208ENST00000487172 RAB35Q15286 201 aa16.79■□□□□ 0.28
PCOLCE-208ENST00000487172 TBC1D28Q2M2D7 210 aa16.79■□□□□ 0.28
PCOLCE-208ENST00000487172 ELFN2Q5R3F8 820 aa16.79■□□□□ 0.28
PCOLCE-208ENST00000487172 CORO6Q6QEF8 472 aa16.79■□□□□ 0.28
PCOLCE-208ENST00000487172 ZNF704Q6ZNC4 412 aaPredicted RBP16.79■□□□□ 0.28
PCOLCE-208ENST00000487172 DPY19L4Q7Z388 723 aa16.79■□□□□ 0.28
PCOLCE-208ENST00000487172 LINC00346Q8IVM7 164 aa16.79■□□□□ 0.28
PCOLCE-208ENST00000487172 PIAS4Q8N2W9 510 aaPredicted RBP16.79■□□□□ 0.28
PCOLCE-208ENST00000487172 SETD9Q8NE22 299 aa16.79■□□□□ 0.28
PCOLCE-208ENST00000487172 OR6N2Q8NGY6 317 aa16.79■□□□□ 0.28
PCOLCE-208ENST00000487172 POM121L2Q96KW2 1035 aa16.79■□□□□ 0.28
PCOLCE-208ENST00000487172 Q96MT0 163 aa16.79■□□□□ 0.28
PCOLCE-208ENST00000487172 COQ7Q99807 217 aa16.79■□□□□ 0.28
PCOLCE-208ENST00000487172 KCNS3Q9BQ31 491 aa16.79■□□□□ 0.28
PCOLCE-208ENST00000487172 HDHD2Q9H0R4 259 aa16.79■□□□□ 0.28
PCOLCE-208ENST00000487172 CLEC4MQ9H2X3 399 aaPredicted RBP16.79■□□□□ 0.28
PCOLCE-208ENST00000487172 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.79■□□□□ 0.28
PCOLCE-208ENST00000487172 OR6C6A6NF89 314 aa16.78■□□□□ 0.28
PCOLCE-208ENST00000487172 SNTNA6NMZ2 147 aa16.78■□□□□ 0.28
PCOLCE-208ENST00000487172 DOK2O60496 412 aa16.78■□□□□ 0.28
PCOLCE-208ENST00000487172 SPARCP09486 303 aa16.78■□□□□ 0.28
PCOLCE-208ENST00000487172 PSKH1P11801 424 aa16.78■□□□□ 0.28
PCOLCE-208ENST00000487172 CALCRP30988 508 aa16.78■□□□□ 0.28
PCOLCE-208ENST00000487172 VHLP40337 213 aa16.78■□□□□ 0.28
PCOLCE-208ENST00000487172 RPS27P42677 84 aaKnown RBP16.78■□□□□ 0.28
PCOLCE-208ENST00000487172 ISL1P61371 349 aa16.78■□□□□ 0.28
PCOLCE-208ENST00000487172 SPOCK1Q08629 439 aa16.78■□□□□ 0.28
PCOLCE-208ENST00000487172 SLC22A25Q6T423 547 aa16.78■□□□□ 0.28
PCOLCE-208ENST00000487172 USP51Q70EK9 711 aa16.78■□□□□ 0.28
PCOLCE-208ENST00000487172 RHOUQ7L0Q8 258 aa16.78■□□□□ 0.28
PCOLCE-208ENST00000487172 SLC16A9Q7RTY1 509 aa16.78■□□□□ 0.28
PCOLCE-208ENST00000487172 TMEM200AQ86VY9 491 aa16.78■□□□□ 0.28
PCOLCE-208ENST00000487172 CDC20BQ86Y33 519 aa16.78■□□□□ 0.28
PCOLCE-208ENST00000487172 ZNF454Q8N9F8 522 aa16.78■□□□□ 0.28
PCOLCE-208ENST00000487172 OR4F15Q8NGB8 312 aa16.78■□□□□ 0.28
PCOLCE-208ENST00000487172 OR1F12Q8NHA8 337 aa16.78■□□□□ 0.28
PCOLCE-208ENST00000487172 LILRB1Q8NHL6 650 aaPredicted RBP16.78■□□□□ 0.28
PCOLCE-208ENST00000487172 OTOSQ8NHW6 89 aa16.78■□□□□ 0.28
PCOLCE-208ENST00000487172 MAP6Q96JE9 813 aa16.78■□□□□ 0.28
PCOLCE-208ENST00000487172 YIPF3Q9GZM5 350 aa16.78■□□□□ 0.28
PCOLCE-208ENST00000487172 RASSF4Q9H2L5 321 aa16.78■□□□□ 0.28
PCOLCE-208ENST00000487172 PNRC2Q9NPJ4 139 aaKnown RBP16.78■□□□□ 0.28
PCOLCE-208ENST00000487172 CLN6Q9NWW5 311 aa16.78■□□□□ 0.28
PCOLCE-208ENST00000487172 DNAJC27Q9NZQ0 273 aa16.78■□□□□ 0.28
PCOLCE-208ENST00000487172 LOC100509620A0A075B734 347 aa16.77■□□□□ 0.28
PCOLCE-208ENST00000487172 SELENOFO60613 162 aa16.77■□□□□ 0.28
PCOLCE-208ENST00000487172 ENTPD6O75354 484 aa16.77■□□□□ 0.28
PCOLCE-208ENST00000487172 CLIC3O95833 236 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms