RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 HRH3Q9Y5N1 445 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 CCDC88CQ9P219 2028 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.42□□□□□ -1.7
SCN3A-202ENST00000360093 CTDSP2O14595 271 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 SH2D1BO14796 132 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 BET1O15155 118 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 PPM1DO15297 605 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 FCMRO60667 390 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 DDOSTP39656 456 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 NOVA1P51513 510 aaKnown RBP4.42□□□□□ -1.7
SCN3A-202ENST00000360093 COL9A2Q14055 689 aaPredicted RBP4.42□□□□□ -1.7
SCN3A-202ENST00000360093 SHBQ15464 509 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 PDLIM3Q53GG5 364 aaPredicted RBP4.42□□□□□ -1.7
SCN3A-202ENST00000360093 TFAP2EQ6VUC0 442 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 TMPRSS11FQ6ZWK6 438 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 LAX1Q8IWV1 398 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 ZNF775Q96BV0 537 aaPredicted RBP4.42□□□□□ -1.7
SCN3A-202ENST00000360093 SLC38A1Q9H2H9 487 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 ASH2LQ9UBL3 628 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 PCDHGA5Q9Y5G8 931 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 A0A1W2PPV4 95 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 SLC22A20A6NK97 555 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 ZNF732B4DXR9 585 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 C21orf140B9A014 251 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 K7EPK0 472 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 M0R296 226 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 NRG2O14511 850 aaPredicted RBP4.42□□□□□ -1.7
SCN3A-202ENST00000360093 APEHP13798 732 aaKnown RBP4.42□□□□□ -1.7
SCN3A-202ENST00000360093 CCR9P51686 369 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 TAS2R30P59541 319 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 SLC14A1Q13336 389 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 TMEM92Q6UXU6 159 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 FAM71E2Q8N5Q1 922 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 DMBX1Q8NFW5 382 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 OR10J5Q8NHC4 309 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 M1APQ8TC57 530 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 MALSU1Q96EH3 234 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 RNF170Q96K19 258 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 OR5M11Q96RB7 305 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 PCOLCE2Q9UKZ9 415 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 MTCL1Q9Y4B5 1905 aaKnown RBP4.42□□□□□ -1.7
SCN3A-202ENST00000360093 A0A1W2PS29 197 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 MEIS3P1A6NDR6 274 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 AIPO00170 330 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 CD1EP15812 388 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 SLC25A1P53007 311 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 RAB5BP61020 215 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 BTG1P62324 171 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 ACSM1Q08AH1 577 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 EIF2S3LQ2VIR3 472 aaKnown RBP4.42□□□□□ -1.7
SCN3A-202ENST00000360093 GLIPR1L1Q6UWM5 242 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 FBXW12Q6X9E4 464 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 PHC2Q8IXK0 858 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 OR52N5Q8NH56 324 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 OR4A16Q8NH70 328 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 NUBPLQ8TB37 319 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 CMTM3Q96MX0 182 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 NMNAT2Q9BZQ4 307 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 FAM212BQ9NTI7 297 aaPredicted RBP4.42□□□□□ -1.7
SCN3A-202ENST00000360093 FBXO4Q9UKT5 387 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 NTNG1Q9Y2I2 539 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 PIKFYVEQ9Y2I7 2098 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 CCDC163A0A0D9SF12 145 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 MT-CO3P00414 261 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 SNCAP37840 140 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 SMAD2Q15796 467 aaKnown RBP4.42□□□□□ -1.7
SCN3A-202ENST00000360093 ZNF718Q3SXZ3 478 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 RHBDD2Q6NTF9 364 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 NCCRP1Q6ZVX7 275 aaPredicted RBP4.42□□□□□ -1.7
SCN3A-202ENST00000360093 MDGA2Q7Z553 956 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 BTF3L4Q96K17 158 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 OR2A5Q96R48 311 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 TRIB1Q96RU8 372 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 CDX2Q99626 313 aaPredicted RBP4.42□□□□□ -1.7
SCN3A-202ENST00000360093 SERGEFQ9UGK8 458 aa4.42□□□□□ -1.7
SCN3A-202ENST00000360093 FAPQ12884 760 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 DEFB109BQ30KR1 87 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 EGFL6Q8IUX8 553 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 OR1M1Q8NGA1 313 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 PP6455Q8WZ26 134 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 SLCO4A1Q96BD0 722 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 FCRL1Q96LA6 429 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 OPALINQ96PE5 141 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 DEFB127Q9H1M4 99 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 HINT3Q9NQE9 182 aaKnown RBP4.41□□□□□ -1.7
SCN3A-202ENST00000360093 IL20Q9NYY1 176 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 LAMP3Q9UQV4 416 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 SPAG17Q6Q759 2223 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 TRAV1-2A0A0B4J238 106 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 FABP1P07148 127 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 ETV5P41161 510 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 HTR2BP41595 481 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 ETV1P50549 477 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 LGALS4P56470 323 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 PMPCAQ10713 525 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 ZNF266Q14584 549 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 KIAA0040Q15053 153 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 HMGN3Q15651 99 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 ZNF74Q16587 644 aa4.41□□□□□ -1.7
SCN3A-202ENST00000360093 GUSBP11Q6P575 273 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms