RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 GON7Q9BXV9 100 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 TAAR2Q9P1P5 351 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 ZNF814B7Z6K7 855 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 PPIHO43447 177 aaKnown RBP11.1□□□□□ -0.63
PCF11-201ENST00000298281 GLAP06280 429 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 PRSS12P56730 875 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 SIX1Q15475 284 aaPredicted RBP11.1□□□□□ -0.63
PCF11-201ENST00000298281 GTDC1Q4AE62 458 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 FAM162BQ5T6X4 162 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 ZNF573Q86YE8 665 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 C1orf87Q8N0U7 546 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 OR2A1Q8NGT9 310 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 TMEM40Q8WWA1 233 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 FGF13Q92913 245 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 DEFB127Q9H1M4 99 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 SIAH2O43255 324 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 NTHL1P78549 312 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 ADAM5Q6NVV9 412 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 TMEFF1Q8IYR6 380 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 OR1N1Q8NGS0 311 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 OR51H1Q8NH63 302 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 COMMD5Q9GZQ3 224 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 HAX1O00165 279 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 CEBPBP17676 345 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 ERVFC1-1P60608 527 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 EXOSC7Q15024 291 aaKnown RBP11.09□□□□□ -0.63
PCF11-201ENST00000298281 GPR19Q15760 415 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 ZNF628Q5EBL2 1059 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 C17orf99Q6UX52 265 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 LRRTM3Q86VH5 581 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 OR6V1Q8N148 313 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 EDEM2Q9BV94 578 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 PARP12Q9H0J9 701 aaKnown RBP11.09□□□□□ -0.63
PCF11-201ENST00000298281 GABARAPL1Q9H0R8 117 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 CLEC1BQ9P126 229 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 AKAP6Q13023 2319 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 FAM181BA6NEQ2 426 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 FAM24AA6NFZ4 105 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 CLDN24A6NM45 220 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 ARHGAP33O14559 1287 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 PPP1R2P9O14990 202 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 GIPRP48546 466 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 JAG1P78504 1218 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 GFRALQ6UXV0 394 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 DGAT2L6Q6ZPD8 337 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 ARID1AO14497 2285 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 GFRA2O00451 464 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 ARSAP15289 507 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 GMPRP36959 345 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 SULT1A1P50225 295 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 CEBPEQ15744 281 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 OR4D10Q8NGI6 311 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 SPHK1Q9NYA1 384 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 KNDC1Q76NI1 1749 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 TCRBV3S1A0A5B6 114 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 SMAD6O43541 496 aaKnown RBP11.09□□□□□ -0.63
PCF11-201ENST00000298281 CCR7P32248 378 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 SORDQ00796 357 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 TNFRSF17Q02223 184 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 RRN3P1Q2M238 152 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 ENTHD1Q8IYW4 607 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 MDGA1Q8NFP4 955 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 ST8SIA4Q92187 359 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 IL2RAP01589 272 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 GLRA1P23415 457 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 IRS1P35568 1242 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 ZNF385BQ569K4 471 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 MRPL2Q5T653 305 aaKnown RBP11.09□□□□□ -0.63
PCF11-201ENST00000298281 PIANPQ8IYJ0 282 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 OR2G3Q8NGZ4 309 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 C20orf85Q9H1P6 137 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 ETV7Q9Y603 341 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 NAV1Q8NEY1 1877 aa11.09□□□□□ -0.63
PCF11-201ENST00000298281 FRS3O43559 492 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 CPN1P15169 458 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 CTBSQ01459 385 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 GAMTQ14353 236 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 PTPRZ1P23471 2315 aaPredicted RBP11.08□□□□□ -0.64
PCF11-201ENST00000298281 TMEM82A0PJX8 343 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 TGOLN2O43493 480 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 XRCC2O43543 280 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 TEKQ02763 1124 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 DUSP2Q05923 314 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 RNFT1Q5M7Z0 435 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 MORN1Q5T089 497 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 DUSP19Q8WTR2 217 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 ZFPM2Q8WW38 1151 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 SLC46A1Q96NT5 459 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 NXF2Q9GZY0 626 aaKnown RBP11.08□□□□□ -0.64
PCF11-201ENST00000298281 MUTYHQ9UIF7 546 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 ZNF724A8MTY0 619 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 DEDDO75618 318 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 MS4A2Q01362 244 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 C18orf63Q68DL7 685 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 ARHGEF39Q8N4T4 335 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 ACY3Q96HD9 319 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 CHST6Q9GZX3 395 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 SEMA4GQ9NTN9 838 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 SLC23A1Q9UHI7 598 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms