RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 GPA33Q99795 319 aa10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 SOX7Q9BT81 388 aa10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 OR2H1Q9GZK4 316 aa10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 HINT3Q9NQE9 182 aaKnown RBP10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 TMEM160Q9NX00 188 aa10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 SLCO1C1Q9NYB5 712 aa10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 IL20RAQ9UHF4 553 aa10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 TIMM10BQ9Y5J6 103 aa10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 TLN2Q9Y4G6 2542 aa10.88□□□□□ -0.67
NPLOC4-213ENST00000573519 ANK3Q12955 4377 aaKnown RBP10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 LOC100509620A0A075B734 347 aa10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 C12orf71A8MTZ7 269 aa10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 LILRA1O75019 489 aa10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 NCR1O76036 304 aa10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 NDUFB2O95178 105 aa10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 MT-ND5P03915 603 aa10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 FABP3P05413 133 aa10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 TACSTD2P09758 323 aa10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 FAM157CP0CG43 387 aa10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 ZNF250P15622 560 aa10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 ITGA2P17301 1181 aa10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 WNT5AP41221 380 aa10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 GPR6P46095 362 aaPredicted RBP10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 OMPP47874 163 aa10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 CCL8P80075 99 aa10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 KRR1Q13601 381 aaKnown RBP10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 SPATS1Q496A3 300 aa10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 MESTQ5EB52 335 aa10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 ZNF774Q6NX45 483 aa10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 UNQ6126/PRO20091Q6UXV3 157 aa10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 ZDHHC21Q8IVQ6 265 aa10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 ZNF101Q8IZC7 436 aa10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 ABHD4Q8TB40 342 aa10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 RASD2Q96D21 266 aa10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 CLPTM1LQ96KA5 538 aa10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 POM121L2Q96KW2 1035 aa10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 FUZQ9BT04 418 aa10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 ZNF416Q9BWM5 594 aa10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 WNT5BQ9H1J7 359 aa10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 EMC7Q9NPA0 242 aa10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 POLE4Q9NR33 117 aa10.87□□□□□ -0.67
NPLOC4-213ENST00000573519 IGLV3-9A0A075B6K5 115 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 PRSS37A4D1T9 235 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 UNC119BA6NIH7 251 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 C17orf100A8MU93 164 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 SOCS2O14508 198 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 PPIHO43447 177 aaKnown RBP10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 SLC16A7O60669 478 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 CDC14BO60729 498 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 PTP4A3O75365 173 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 GADD45GO95257 159 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 SCG5P05408 212 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 SRD5A1P18405 259 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 HNF1AP20823 631 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 ACHEP22303 614 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 SDHAP31040 664 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 RRM2P31350 389 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 LIMS1P48059 325 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 MS4A2Q01362 244 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 ENDOGQ14249 297 aaKnown RBP10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 MOGQ16653 247 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 TSTQ16762 297 aaKnown RBP10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 ZNF718Q3SXZ3 478 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 FAM120AOSQ5T036 256 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 UGT2A3Q6UWM9 527 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 FOXL2NBQ6ZUU3 175 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 TRPM8Q7Z2W7 1104 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 SLC25A40Q8TBP6 338 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 GTF3AQ92664 365 aaKnown RBP10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 HPS1Q92902 700 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 YIPF5Q969M3 257 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 IL1RAPQ9NPH3 570 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 ZNF275Q9NSD4 429 aaPredicted RBP10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 DECR2Q9NUI1 292 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 TAS2R1Q9NYW7 299 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 ACTR3BQ9P1U1 418 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 SIGLEC7Q9Y286 467 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 IER3IP1Q9Y5U9 82 aa10.86□□□□□ -0.67
NPLOC4-213ENST00000573519 TCRBV5S2A0A599 114 aa10.85□□□□□ -0.67
NPLOC4-213ENST00000573519 PLSCR5A0PG75 271 aa10.85□□□□□ -0.67
NPLOC4-213ENST00000573519 DOK2O60496 412 aa10.85□□□□□ -0.67
NPLOC4-213ENST00000573519 UBOX5O94941 541 aa10.85□□□□□ -0.67
NPLOC4-213ENST00000573519 CTLA4P16410 223 aa10.85□□□□□ -0.67
NPLOC4-213ENST00000573519 MPV17P39210 176 aa10.85□□□□□ -0.67
NPLOC4-213ENST00000573519 CENPAP49450 140 aa10.85□□□□□ -0.67
NPLOC4-213ENST00000573519 RPS6KA3P51812 740 aa10.85□□□□□ -0.67
NPLOC4-213ENST00000573519 ARHGDIAP52565 204 aa10.85□□□□□ -0.67
NPLOC4-213ENST00000573519 SMIM11AP58511 58 aa10.85□□□□□ -0.67
NPLOC4-213ENST00000573519 FXYD6P3P58550 94 aa10.85□□□□□ -0.67
NPLOC4-213ENST00000573519 SCRN3Q0VDG4 424 aa10.85□□□□□ -0.67
NPLOC4-213ENST00000573519 PCGF3Q3KNV8 242 aa10.85□□□□□ -0.67
NPLOC4-213ENST00000573519 OTPQ5XKR4 325 aa10.85□□□□□ -0.67
NPLOC4-213ENST00000573519 GPR139Q6DWJ6 353 aa10.85□□□□□ -0.67
NPLOC4-213ENST00000573519 THSD4Q6ZMP0 1018 aa10.85□□□□□ -0.67
NPLOC4-213ENST00000573519 RFPL4BQ6ZWI9 263 aa10.85□□□□□ -0.67
NPLOC4-213ENST00000573519 CXXC5Q7LFL8 322 aaKnown RBP10.85□□□□□ -0.67
NPLOC4-213ENST00000573519 FAM122BQ7Z309 247 aa10.85□□□□□ -0.67
NPLOC4-213ENST00000573519 ZER1Q7Z7L7 766 aa10.85□□□□□ -0.67
NPLOC4-213ENST00000573519 DHFR2Q86XF0 187 aa10.85□□□□□ -0.67
NPLOC4-213ENST00000573519 LINC01356Q8N9X3 169 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms