RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 OR7C1O76099 320 aaPredicted RBP17.69■□□□□ 0.42
SUDS3-204ENST00000543473 C19orf57Q0VDD7 668 aa17.69■□□□□ 0.42
SUDS3-204ENST00000543473 MRPL49Q13405 166 aaKnown RBP17.69■□□□□ 0.42
SUDS3-204ENST00000543473 RNF212Q495C1 297 aa17.69■□□□□ 0.42
SUDS3-204ENST00000543473 GLYR1Q49A26 553 aaPredicted RBP17.69■□□□□ 0.42
SUDS3-204ENST00000543473 TMEM71Q6P5X7 295 aa17.69■□□□□ 0.42
SUDS3-204ENST00000543473 Q6ZRG5 221 aa17.69■□□□□ 0.42
SUDS3-204ENST00000543473 PRSS35Q8N3Z0 413 aa17.69■□□□□ 0.42
SUDS3-204ENST00000543473 LFNGQ8NES3 379 aa17.69■□□□□ 0.42
SUDS3-204ENST00000543473 OR9K2Q8NGE7 335 aa17.69■□□□□ 0.42
SUDS3-204ENST00000543473 HINT2Q9BX68 163 aa17.69■□□□□ 0.42
SUDS3-204ENST00000543473 RFPL4AA6NLU0 287 aa17.68■□□□□ 0.42
SUDS3-204ENST00000543473 RFPL4AL1F8VTS6 287 aa17.68■□□□□ 0.42
SUDS3-204ENST00000543473 HCRTR1O43613 425 aa17.68■□□□□ 0.42
SUDS3-204ENST00000543473 NDUFB6O95139 128 aa17.68■□□□□ 0.42
SUDS3-204ENST00000543473 RRASP10301 218 aa17.68■□□□□ 0.42
SUDS3-204ENST00000543473 C10orf111Q8N326 155 aa17.68■□□□□ 0.42
SUDS3-204ENST00000543473 GALNT16Q8N428 558 aa17.68■□□□□ 0.42
SUDS3-204ENST00000543473 C9orf62Q8N4C0 152 aa17.68■□□□□ 0.42
SUDS3-204ENST00000543473 RAB39BQ96DA2 213 aa17.68■□□□□ 0.42
SUDS3-204ENST00000543473 PLEKHA3Q9HB20 300 aa17.68■□□□□ 0.42
SUDS3-204ENST00000543473 SPHK1Q9NYA1 384 aa17.68■□□□□ 0.42
SUDS3-204ENST00000543473 TMED7-TICAM2A0A0A6YYA0 188 aa17.68■□□□□ 0.42
SUDS3-204ENST00000543473 BAMBIQ13145 260 aa17.68■□□□□ 0.42
SUDS3-204ENST00000543473 ZNF79Q15937 498 aa17.68■□□□□ 0.42
SUDS3-204ENST00000543473 TMEM52BQ4KMG9 183 aa17.68■□□□□ 0.42
SUDS3-204ENST00000543473 OPN5Q6U736 354 aa17.68■□□□□ 0.42
SUDS3-204ENST00000543473 WDR88Q6ZMY6 472 aa17.68■□□□□ 0.42
SUDS3-204ENST00000543473 HIST2H3AQ71DI3 136 aa17.68■□□□□ 0.42
SUDS3-204ENST00000543473 FN3KRPQ9HA64 309 aa17.68■□□□□ 0.42
SUDS3-204ENST00000543473 TMED7Q9Y3B3 224 aa17.68■□□□□ 0.42
SUDS3-204ENST00000543473 XRCC3O43542 346 aa17.68■□□□□ 0.42
SUDS3-204ENST00000543473 AQP8O94778 261 aa17.68■□□□□ 0.42
SUDS3-204ENST00000543473 OR2C1O95371 312 aa17.68■□□□□ 0.42
SUDS3-204ENST00000543473 CCR2P41597 374 aa17.68■□□□□ 0.42
SUDS3-204ENST00000543473 ZP2Q05996 745 aa17.68■□□□□ 0.42
SUDS3-204ENST00000543473 OGFOD3Q6PK18 319 aa17.68■□□□□ 0.42
SUDS3-204ENST00000543473 LYPD8Q6UX82 237 aa17.68■□□□□ 0.42
SUDS3-204ENST00000543473 RARRES3Q9UL19 164 aa17.68■□□□□ 0.42
SUDS3-204ENST00000543473 H7C1Q1 480 aa17.67■□□□□ 0.42
SUDS3-204ENST00000543473 NME2P1O60361 137 aa17.67■□□□□ 0.42
SUDS3-204ENST00000543473 PTHLHP12272 177 aa17.67■□□□□ 0.42
SUDS3-204ENST00000543473 CD38P28907 300 aa17.67■□□□□ 0.42
SUDS3-204ENST00000543473 ATP1B3P54709 279 aa17.67■□□□□ 0.42
SUDS3-204ENST00000543473 PTCRAQ6ISU1 281 aaPredicted RBP17.67■□□□□ 0.42
SUDS3-204ENST00000543473 CD300LGQ6UXG3 332 aa17.67■□□□□ 0.42
SUDS3-204ENST00000543473 ZNF561Q8N587 486 aa17.67■□□□□ 0.42
SUDS3-204ENST00000543473 SLC6A17Q9H1V8 727 aa17.67■□□□□ 0.42
SUDS3-204ENST00000543473 TMEM100Q9NV29 134 aa17.67■□□□□ 0.42
SUDS3-204ENST00000543473 B3GALT5Q9Y2C3 310 aa17.67■□□□□ 0.42
SUDS3-204ENST00000543473 UMAD1C9J7I0 102 aa17.67■□□□□ 0.42
SUDS3-204ENST00000543473 DCTN6O00399 190 aa17.67■□□□□ 0.42
SUDS3-204ENST00000543473 TXNDC12O95881 172 aa17.67■□□□□ 0.42
SUDS3-204ENST00000543473 RD3LP0DJH9 198 aa17.67■□□□□ 0.42
SUDS3-204ENST00000543473 TIAL1Q01085 375 aaKnown RBP eCLIP17.67■□□□□ 0.42
SUDS3-204ENST00000543473 KCNIP4Q6PIL6 250 aa17.67■□□□□ 0.42
SUDS3-204ENST00000543473 IL1F10Q8WWZ1 152 aa17.67■□□□□ 0.42
SUDS3-204ENST00000543473 PRRT4C9JH25 899 aa17.67■□□□□ 0.42
SUDS3-204ENST00000543473 DDAH2O95865 285 aa17.67■□□□□ 0.42
SUDS3-204ENST00000543473 TMEM81Q6P7N7 255 aa17.67■□□□□ 0.42
SUDS3-204ENST00000543473 NAXDQ8IW45 347 aa17.67■□□□□ 0.42
SUDS3-204ENST00000543473 TP53I13Q8NBR0 393 aaPredicted RBP17.67■□□□□ 0.42
SUDS3-204ENST00000543473 LIN37Q96GY3 246 aaPredicted RBP17.67■□□□□ 0.42
SUDS3-204ENST00000543473 STRADBQ9C0K7 418 aa17.67■□□□□ 0.42
SUDS3-204ENST00000543473 PLEKHM1Q9Y4G2 1056 aa17.67■□□□□ 0.42
SUDS3-204ENST00000543473 LOC107986453A0A1B0GWG9 222 aa17.67■□□□□ 0.42
SUDS3-204ENST00000543473 PLPP2O43688 288 aa17.67■□□□□ 0.42
SUDS3-204ENST00000543473 ZNF354AO60765 605 aaPredicted RBP17.67■□□□□ 0.42
SUDS3-204ENST00000543473 ALOX5APP20292 161 aa17.67■□□□□ 0.42
SUDS3-204ENST00000543473 SDHAP31040 664 aa17.67■□□□□ 0.42
SUDS3-204ENST00000543473 C5orf46Q6UWT4 87 aa17.67■□□□□ 0.42
SUDS3-204ENST00000543473 CCDC71Q8IV32 467 aaPredicted RBP17.67■□□□□ 0.42
SUDS3-204ENST00000543473 A8MXE2 369 aa17.66■□□□□ 0.42
SUDS3-204ENST00000543473 TMEM127O75204 238 aa17.66■□□□□ 0.42
SUDS3-204ENST00000543473 HOXC8P31273 242 aa17.66■□□□□ 0.42
SUDS3-204ENST00000543473 TDHQ8IZJ6 230 aa17.66■□□□□ 0.42
SUDS3-204ENST00000543473 ZC3HAV1LQ96H79 300 aaKnown RBP17.66■□□□□ 0.42
SUDS3-204ENST00000543473 COA3Q9Y2R0 106 aaPredicted RBP17.66■□□□□ 0.42
SUDS3-204ENST00000543473 GALR3O60755 368 aaPredicted RBP17.66■□□□□ 0.42
SUDS3-204ENST00000543473 PDZD11Q5EBL8 140 aa17.66■□□□□ 0.42
SUDS3-204ENST00000543473 TMPPEQ6ZT21 453 aa17.66■□□□□ 0.42
SUDS3-204ENST00000543473 SGK3Q96BR1 496 aa17.66■□□□□ 0.42
SUDS3-204ENST00000543473 SDSLQ96GA7 329 aa17.66■□□□□ 0.42
SUDS3-204ENST00000543473 HDAC8Q9BY41 377 aa17.66■□□□□ 0.42
SUDS3-204ENST00000543473 BANF2Q9H503 90 aa17.66■□□□□ 0.42
SUDS3-204ENST00000543473 LYRM4Q9HD34 91 aa17.66■□□□□ 0.42
SUDS3-204ENST00000543473 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.66■□□□□ 0.42
SUDS3-204ENST00000543473 BET1O15155 118 aa17.66■□□□□ 0.42
SUDS3-204ENST00000543473 OR2L13Q8N349 312 aa17.66■□□□□ 0.42
SUDS3-204ENST00000543473 TMEM217Q8N7C4 229 aa17.66■□□□□ 0.42
SUDS3-204ENST00000543473 OR14L1PQ8NHC6 308 aa17.66■□□□□ 0.42
SUDS3-204ENST00000543473 NUDCD2Q8WVJ2 157 aa17.66■□□□□ 0.42
SUDS3-204ENST00000543473 PAPOLGQ9BWT3 736 aaKnown RBP17.66■□□□□ 0.42
SUDS3-204ENST00000543473 PTPRZ1P23471 2315 aaPredicted RBP17.66■□□□□ 0.42
SUDS3-204ENST00000543473 PHF1O43189 567 aaPredicted RBP17.66■□□□□ 0.42
SUDS3-204ENST00000543473 LCORQ96JN0 433 aaPredicted RBP17.66■□□□□ 0.42
SUDS3-204ENST00000543473 TRAF4Q9BUZ4 470 aaPredicted RBP17.66■□□□□ 0.42
SUDS3-204ENST00000543473 KCNE3Q9Y6H6 103 aa17.66■□□□□ 0.42
SUDS3-204ENST00000543473 CXCL3P19876 107 aa17.65■□□□□ 0.42
SUDS3-204ENST00000543473 HTD2P86397 168 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms