RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 ZNF684Q5T5D7 378 aa9.13□□□□□ -0.95
HDAC3-214ENST00000495485 LIPNQ5VXI9 398 aa9.13□□□□□ -0.95
HDAC3-214ENST00000495485 KLHL24Q6TFL4 600 aa9.13□□□□□ -0.95
HDAC3-214ENST00000495485 CREB3L2Q70SY1 520 aa9.13□□□□□ -0.95
HDAC3-214ENST00000495485 CHMP1BQ7LBR1 199 aa9.13□□□□□ -0.95
HDAC3-214ENST00000495485 SULF2Q8IWU5 870 aa9.13□□□□□ -0.95
HDAC3-214ENST00000495485 ZNF676Q8N7Q3 588 aa9.13□□□□□ -0.95
HDAC3-214ENST00000495485 OR2V1Q8NHB1 315 aa9.13□□□□□ -0.95
HDAC3-214ENST00000495485 ZNRF4Q8WWF5 429 aa9.13□□□□□ -0.95
HDAC3-214ENST00000495485 TXNDC15Q96J42 360 aa9.13□□□□□ -0.95
HDAC3-214ENST00000495485 WDFY2Q96P53 400 aa9.13□□□□□ -0.95
HDAC3-214ENST00000495485 SLC30A2Q9BRI3 323 aa9.13□□□□□ -0.95
HDAC3-214ENST00000495485 MFRPQ9BY79 579 aa9.13□□□□□ -0.95
HDAC3-214ENST00000495485 MRPL13Q9BYD1 178 aaKnown RBP9.13□□□□□ -0.95
HDAC3-214ENST00000495485 C1orf198Q9H425 327 aa9.13□□□□□ -0.95
HDAC3-214ENST00000495485 AKIP1Q9NQ31 210 aa9.13□□□□□ -0.95
HDAC3-214ENST00000495485 GLTPQ9NZD2 209 aa9.13□□□□□ -0.95
HDAC3-214ENST00000495485 KLHL13Q9P2N7 655 aa9.13□□□□□ -0.95
HDAC3-214ENST00000495485 B3GAT1Q9P2W7 334 aa9.13□□□□□ -0.95
HDAC3-214ENST00000495485 RCE1Q9Y256 329 aa9.13□□□□□ -0.95
HDAC3-214ENST00000495485 SPENQ96T58 3664 aaKnown RBP9.13□□□□□ -0.95
HDAC3-214ENST00000495485 UBR5O95071 2799 aaPredicted RBP9.12□□□□□ -0.95
HDAC3-214ENST00000495485 A0A0J9YW62 118 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 A0A1W2PPL8 197 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 ISPDA4D126 451 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 ANKRD61A6NGH8 418 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 LRRC3CA6NJW4 275 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 OR6C65A6NJZ3 312 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 TRAF3IP2O43734 574 aaPredicted RBP9.12□□□□□ -0.95
HDAC3-214ENST00000495485 SLC43A1O75387 559 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 RPP14O95059 124 aaKnown RBP9.12□□□□□ -0.95
HDAC3-214ENST00000495485 ACTL6AO96019 429 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 PDGFAP04085 211 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 H2BFMP0C1H6 154 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 OR8G3PP0DMU2 310 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 RAB3BP20337 219 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 PTBP1P26599 531 aaKnown RBP eCLIP9.12□□□□□ -0.95
HDAC3-214ENST00000495485 DCTDP32321 178 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 ETV6P41212 452 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 B3GALT5-AS1P59052 145 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 DEFA1P59665 94 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 DEFA3P59666 94 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 LSM6P62312 80 aaKnown RBP9.12□□□□□ -0.95
HDAC3-214ENST00000495485 FOXO1Q12778 655 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 CAMK2DQ13557 499 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 SLC17A1Q14916 467 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 KCNMB1Q16558 191 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 PCK2Q16822 640 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 HYAL4Q2M3T9 481 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 HSD17B12Q53GQ0 312 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 ZMAT1Q5H9K5 638 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 METAP1DQ6UB28 335 aaPredicted RBP9.12□□□□□ -0.95
HDAC3-214ENST00000495485 UNQ9370/PRO34162Q6UXP9 181 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 ZNF704Q6ZNC4 412 aaPredicted RBP9.12□□□□□ -0.95
HDAC3-214ENST00000495485 TMEM91Q6ZNR0 172 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 ZNF227Q86WZ6 799 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 SLC26A10Q8NG04 563 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 OR9K2Q8NGE7 335 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 OR52N5Q8NH56 324 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 GPR148Q8TDV2 347 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 RNF128Q8TEB7 428 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 PGLYRP3Q96LB9 341 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 SIGLEC12Q96PQ1 595 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 EMC6Q9BV81 110 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 TTTY12Q9BZ98 90 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 SEC61A2Q9H9S3 476 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 ELOVL3Q9HB03 270 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 TCF7L1Q9HCS4 588 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 DEPPQ9NTK1 212 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 ACOXLQ9NUZ1 547 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 PARPBPQ9NWS1 579 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 EMC3Q9P0I2 261 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 RABL2AQ9UBK7 228 aaPredicted RBP9.12□□□□□ -0.95
HDAC3-214ENST00000495485 MRM2Q9UI43 246 aaKnown RBP9.12□□□□□ -0.95
HDAC3-214ENST00000495485 MCTS1Q9ULC4 181 aaKnown RBP9.12□□□□□ -0.95
HDAC3-214ENST00000495485 RABL2BQ9UNT1 228 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 HRH3Q9Y5N1 445 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 SIRT4Q9Y6E7 314 aaPredicted RBP9.12□□□□□ -0.95
HDAC3-214ENST00000495485 PMF1-BGLAPU3KQ54 211 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 PCNX1Q96RV3 2341 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 KIAA1549Q9HCM3 1950 aa9.12□□□□□ -0.95
HDAC3-214ENST00000495485 E9PI62 339 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 UPK3AO75631 287 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 SC5DO75845 299 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 APOC1P02654 83 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 CD2P06729 351 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 QDPRP09417 244 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 UCHL1P09936 223 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 NPR2P20594 1047 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 SHC1P29353 583 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 TALDO1P37837 337 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 PSMB10P40306 273 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 EIF1AXP47813 144 aaKnown RBP9.11□□□□□ -0.95
HDAC3-214ENST00000495485 MEOX1P50221 254 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 GFRA1P56159 465 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 TAF13Q15543 124 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 HIST3H3Q16695 136 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 MEP1BQ16820 701 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 RGS21Q2M5E4 152 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 PLEKHN1Q494U1 663 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms