RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 ZNF587Q96SQ5 575 aaPredicted RBP5.12□□□□□ -1.59
HDAC3-206ENST00000471968 DCLRE1BQ9H816 532 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 CAB39LQ9H9S4 337 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 BRF2Q9HAW0 419 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 POPDC3Q9HBV1 291 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 TRIM36Q9NQ86 728 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 LMBRD1Q9NUN5 540 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 VPS29Q9UBQ0 182 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 PSAT1Q9Y617 370 aa5.12□□□□□ -1.59
HDAC3-206ENST00000471968 SIRT4Q9Y6E7 314 aaPredicted RBP5.12□□□□□ -1.59
HDAC3-206ENST00000471968 LOC100509620A0A075B734 347 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 F5H5P2 479 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 LGALS8O00214 317 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 IMPA2O14732 288 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 UGT2B17O75795 530 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 HMGN2P05204 90 aaKnown RBP5.11□□□□□ -1.59
HDAC3-206ENST00000471968 DUX4L4P0CJ87 422 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 KITLGP21583 273 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 CXCR1P25024 350 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 CCT3P49368 545 aaKnown RBP5.11□□□□□ -1.59
HDAC3-206ENST00000471968 ERFP50548 548 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 MAP2K6P52564 334 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 LGALS4P56470 323 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 LINC00205P59089 165 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 KIR2DS1Q14954 304 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 TAF11Q15544 211 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 ZNF141Q15928 474 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 PFKFB4Q16877 469 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 PABPC1L2AQ5JQF8 200 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 C9orf152Q5JTZ5 239 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 Q5VSD8 79 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 OLIG3Q7RTU3 272 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 IGDCC3Q8IVU1 814 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 KLHL7Q8IXQ5 586 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 FAM71CQ8NEG0 241 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 OR4K5Q8NGD3 323 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 OR11L1Q8NGX0 322 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 BCAS4Q8TDM0 211 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 PHLDA1Q8WV24 401 aaPredicted RBP5.11□□□□□ -1.59
HDAC3-206ENST00000471968 NABP1Q96AH0 204 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 CMBLQ96DG6 245 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 POM121L2Q96KW2 1035 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 LRR1Q96L50 414 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 CHP1Q99653 195 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 NHEJ1Q9H9Q4 299 aaPredicted RBP5.11□□□□□ -1.59
HDAC3-206ENST00000471968 TAS2R7Q9NYW3 318 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 CEPT1Q9Y6K0 416 aa5.11□□□□□ -1.59
HDAC3-206ENST00000471968 PKHD1L1Q86WI1 4243 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 M0R1W7 72 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 PDPK1O15530 556 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 NDUFA2O43678 99 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 ENTPD5O75356 428 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 GLCEO94923 617 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 INHBAP08476 426 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 TPM1P09493 284 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 ANXA4P09525 319 aaPredicted RBP5.1□□□□□ -1.59
HDAC3-206ENST00000471968 GFAPP14136 432 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 CHN1P15882 459 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 JUNBP17275 347 aaPredicted RBP5.1□□□□□ -1.59
HDAC3-206ENST00000471968 GSTM3P21266 225 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 GGT2P36268 569 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 MAGEA3P43357 314 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 MAGEA6P43360 314 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 GDI2P50395 445 aaKnown RBP5.1□□□□□ -1.59
HDAC3-206ENST00000471968 ARHGDIAP52565 204 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 GABPB1Q06547 395 aaPredicted RBP5.1□□□□□ -1.59
HDAC3-206ENST00000471968 ECH1Q13011 328 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 BLMHQ13867 455 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 MAPK14Q16539 360 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 SPANXN3Q5MJ09 141 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 CLEC12AQ5QGZ9 265 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 HHATQ5VTY9 493 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 C1orf140Q5VVS0 124 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 TRMT10BQ6PF06 316 aaKnown RBP5.1□□□□□ -1.59
HDAC3-206ENST00000471968 DPPA2Q7Z7J5 298 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 ISCA2Q86U28 154 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 FAM71E2Q8N5Q1 922 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 ARFGAP2Q8N6H7 521 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 GVQW1Q8N7I0 195 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 H1FXQ92522 213 aaKnown RBP5.1□□□□□ -1.59
HDAC3-206ENST00000471968 CIDECQ96AQ7 238 aaPredicted RBP5.1□□□□□ -1.59
HDAC3-206ENST00000471968 MRRFQ96E11 262 aaKnown RBP5.1□□□□□ -1.59
HDAC3-206ENST00000471968 APIPQ96GX9 242 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 ZNF607Q96SK3 696 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 UFSP2Q9NUQ7 469 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 TMEM38BQ9NVV0 291 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 MKLN1Q9UL63 735 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 SLC35A3Q9Y2D2 325 aa5.1□□□□□ -1.59
HDAC3-206ENST00000471968 TRAV38-1A0A0B4J264 116 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 A0A0J9YWU9 116 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 OOEPA6NGQ2 149 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 CLDN24A6NM45 220 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 H0YAE9 185 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 BANF1O75531 89 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 SCAF4O95104 1147 aaKnown RBP5.09□□□□□ -1.59
HDAC3-206ENST00000471968 TFPTP0C1Z6 253 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 HLA-DOBP13765 273 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 CSNK1A1P48729 337 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 GSK3BP49841 420 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 BTKQ06187 659 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms