RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 PLGP00747 810 aaPredicted RBP22.48■■□□□ 1.19
ROM1-201ENST00000278833 PTHLHP12272 177 aa22.48■■□□□ 1.19
ROM1-201ENST00000278833 EIF2B1Q14232 305 aaKnown RBP22.48■■□□□ 1.19
ROM1-201ENST00000278833 PCGF3Q3KNV8 242 aa22.48■■□□□ 1.19
ROM1-201ENST00000278833 SLC35D2Q76EJ3 337 aa22.48■■□□□ 1.19
ROM1-201ENST00000278833 MEIOBQ8N635 442 aa22.48■■□□□ 1.19
ROM1-201ENST00000278833 NUBPLQ8TB37 319 aa22.48■■□□□ 1.19
ROM1-201ENST00000278833 GPX8Q8TED1 209 aa22.48■■□□□ 1.19
ROM1-201ENST00000278833 PTX4Q96A99 478 aa22.48■■□□□ 1.19
ROM1-201ENST00000278833 SCPEP1Q9HB40 452 aa22.48■■□□□ 1.19
ROM1-201ENST00000278833 EIF3KQ9UBQ5 218 aaKnown RBP22.48■■□□□ 1.19
ROM1-201ENST00000278833 CKLFQ9UBR5 152 aa22.48■■□□□ 1.19
ROM1-201ENST00000278833 ZNF208O43345 1280 aa22.47■■□□□ 1.19
ROM1-201ENST00000278833 MPC2O95563 127 aa22.47■■□□□ 1.19
ROM1-201ENST00000278833 AKAIN1P0CW23 69 aa22.47■■□□□ 1.19
ROM1-201ENST00000278833 GABRA1P14867 456 aa22.47■■□□□ 1.19
ROM1-201ENST00000278833 DAP3P51398 398 aaKnown RBP22.47■■□□□ 1.19
ROM1-201ENST00000278833 EFNB2P52799 333 aa22.47■■□□□ 1.19
ROM1-201ENST00000278833 CAPZA1P52907 286 aa22.47■■□□□ 1.19
ROM1-201ENST00000278833 MFGE8Q08431 387 aaPredicted RBP22.47■■□□□ 1.19
ROM1-201ENST00000278833 PUDPQ08623 228 aa22.47■■□□□ 1.19
ROM1-201ENST00000278833 C2orf76Q3KRA6 126 aa22.47■■□□□ 1.19
ROM1-201ENST00000278833 RHBDD2Q6NTF9 364 aa22.47■■□□□ 1.19
ROM1-201ENST00000278833 WDR5BQ86VZ2 330 aa22.47■■□□□ 1.19
ROM1-201ENST00000278833 ELMOD2Q8IZ81 293 aa22.47■■□□□ 1.19
ROM1-201ENST00000278833 SLC26A10Q8NG04 563 aa22.47■■□□□ 1.19
ROM1-201ENST00000278833 OR6M1Q8NGM8 313 aa22.47■■□□□ 1.19
ROM1-201ENST00000278833 SLC22A13Q9Y226 551 aa22.47■■□□□ 1.19
ROM1-201ENST00000278833 TNFSF12-TNFSF13A0A0A6YY99 330 aa22.47■■□□□ 1.19
ROM1-201ENST00000278833 LOC390937A0A1W2PQ73 354 aa22.47■■□□□ 1.19
ROM1-201ENST00000278833 PLSCR5A0PG75 271 aa22.47■■□□□ 1.19
ROM1-201ENST00000278833 OR6C65A6NJZ3 312 aa22.47■■□□□ 1.19
ROM1-201ENST00000278833 HRGP04196 525 aa22.47■■□□□ 1.19
ROM1-201ENST00000278833 APOBEC1P41238 236 aaKnown RBP22.47■■□□□ 1.19
ROM1-201ENST00000278833 AP2S1P53680 142 aaPredicted RBP22.47■■□□□ 1.19
ROM1-201ENST00000278833 CSRP2Q16527 193 aa22.47■■□□□ 1.19
ROM1-201ENST00000278833 RABEPKQ7Z6M1 372 aa22.47■■□□□ 1.19
ROM1-201ENST00000278833 BIVMQ86UB2 503 aa22.47■■□□□ 1.19
ROM1-201ENST00000278833 FTMTQ8N4E7 242 aa22.47■■□□□ 1.19
ROM1-201ENST00000278833 ZBTB44Q8NCP5 570 aa22.47■■□□□ 1.19
ROM1-201ENST00000278833 NFAM1Q8NET5 270 aaPredicted RBP22.47■■□□□ 1.19
ROM1-201ENST00000278833 FGF21Q9NSA1 209 aa22.47■■□□□ 1.19
ROM1-201ENST00000278833 UBQLN2Q9UHD9 624 aa22.47■■□□□ 1.19
ROM1-201ENST00000278833 SDK1Q7Z5N4 2213 aa22.46■■□□□ 1.19
ROM1-201ENST00000278833 TMEM272A0A1B0GTI8 110 aa22.46■■□□□ 1.19
ROM1-201ENST00000278833 LDLRAD4O15165 306 aa22.46■■□□□ 1.19
ROM1-201ENST00000278833 RGS11O94810 467 aa22.46■■□□□ 1.19
ROM1-201ENST00000278833 GIMD1P0DJR0 217 aa22.46■■□□□ 1.19
ROM1-201ENST00000278833 NAGAP17050 411 aa22.46■■□□□ 1.19
ROM1-201ENST00000278833 ANXA7P20073 488 aaKnown RBP22.46■■□□□ 1.19
ROM1-201ENST00000278833 ACTBP60709 375 aa22.46■■□□□ 1.19
ROM1-201ENST00000278833 ACTG1P63261 375 aa22.46■■□□□ 1.19
ROM1-201ENST00000278833 C17orf67Q0P5P2 114 aa22.46■■□□□ 1.19
ROM1-201ENST00000278833 LANCL3Q6ZV70 420 aa22.46■■□□□ 1.19
ROM1-201ENST00000278833 NDUFAF7Q7L592 441 aa22.46■■□□□ 1.19
ROM1-201ENST00000278833 CLEC1AQ8NC01 280 aa22.46■■□□□ 1.19
ROM1-201ENST00000278833 ZNF248Q8NDW4 579 aa22.46■■□□□ 1.19
ROM1-201ENST00000278833 OR1J4Q8NGS1 313 aa22.46■■□□□ 1.19
ROM1-201ENST00000278833 OR8K3Q8NH51 312 aa22.46■■□□□ 1.19
ROM1-201ENST00000278833 DUSP19Q8WTR2 217 aa22.46■■□□□ 1.19
ROM1-201ENST00000278833 CITED4Q96RK1 184 aa22.46■■□□□ 1.19
ROM1-201ENST00000278833 ALX4Q9H161 411 aaPredicted RBP22.46■■□□□ 1.19
ROM1-201ENST00000278833 CTSFQ9UBX1 484 aa22.46■■□□□ 1.19
ROM1-201ENST00000278833 PISDQ9UG56 409 aa22.46■■□□□ 1.19
ROM1-201ENST00000278833 GMFGO60234 142 aa22.45■■□□□ 1.19
ROM1-201ENST00000278833 DOK2O60496 412 aa22.45■■□□□ 1.19
ROM1-201ENST00000278833 PRSS3P35030 304 aa22.45■■□□□ 1.19
ROM1-201ENST00000278833 EXOSC2Q13868 293 aaKnown RBP22.45■■□□□ 1.19
ROM1-201ENST00000278833 KCNK17Q96T54 332 aa22.45■■□□□ 1.19
ROM1-201ENST00000278833 SLCO5A1Q9H2Y9 848 aa22.45■■□□□ 1.19
ROM1-201ENST00000278833 SLC22A11Q9NSA0 550 aa22.45■■□□□ 1.19
ROM1-201ENST00000278833 KLHL13Q9P2N7 655 aa22.45■■□□□ 1.19
ROM1-201ENST00000278833 ZNF69Q9UC07 566 aa22.45■■□□□ 1.19
ROM1-201ENST00000278833 HHLA2Q9UM44 414 aa22.45■■□□□ 1.19
ROM1-201ENST00000278833 ABCA7Q8IZY2 2146 aa22.45■■□□□ 1.18
ROM1-201ENST00000278833 MS4A18H0YCH9 400 aa22.45■■□□□ 1.18
ROM1-201ENST00000278833 PYCARD-AS1I3L0S3 204 aa22.45■■□□□ 1.18
ROM1-201ENST00000278833 SHOXO15266 292 aa22.45■■□□□ 1.18
ROM1-201ENST00000278833 WNT11O96014 354 aa22.45■■□□□ 1.18
ROM1-201ENST00000278833 PSMA6P60900 246 aaKnown RBP22.45■■□□□ 1.18
ROM1-201ENST00000278833 TSPAN5P62079 268 aa22.45■■□□□ 1.18
ROM1-201ENST00000278833 MPPED2Q15777 294 aa22.45■■□□□ 1.18
ROM1-201ENST00000278833 MS4A18Q3C1V0 323 aa22.45■■□□□ 1.18
ROM1-201ENST00000278833 C1orf100Q5SVJ3 147 aa22.45■■□□□ 1.18
ROM1-201ENST00000278833 C1orf189Q5VU69 101 aa22.45■■□□□ 1.18
ROM1-201ENST00000278833 FAAP20Q6NZ36 180 aa22.45■■□□□ 1.18
ROM1-201ENST00000278833 NKAIN3Q8N8D7 197 aa22.45■■□□□ 1.18
ROM1-201ENST00000278833 APCDD1LQ8NCL9 501 aa22.45■■□□□ 1.18
ROM1-201ENST00000278833 ST7LQ8TDW4 575 aa22.45■■□□□ 1.18
ROM1-201ENST00000278833 PIGKQ92643 395 aa22.45■■□□□ 1.18
ROM1-201ENST00000278833 OR11A1Q9GZK7 315 aa22.45■■□□□ 1.18
ROM1-201ENST00000278833 G6PC2Q9NQR9 355 aa22.45■■□□□ 1.18
ROM1-201ENST00000278833 CA10Q9NS85 328 aa22.45■■□□□ 1.18
ROM1-201ENST00000278833 PCNX3Q9H6A9 2034 aa22.44■■□□□ 1.18
ROM1-201ENST00000278833 UBE2QL1A1L167 161 aa22.44■■□□□ 1.18
ROM1-201ENST00000278833 VSIG10L2P0DP72 767 aa22.44■■□□□ 1.18
ROM1-201ENST00000278833 SDHBP21912 280 aa22.44■■□□□ 1.18
ROM1-201ENST00000278833 ETFDHQ16134 617 aa22.44■■□□□ 1.18
ROM1-201ENST00000278833 OR7E24Q6IFN5 339 aa22.44■■□□□ 1.18
ROM1-201ENST00000278833 ZNF704Q6ZNC4 412 aaPredicted RBP22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms