RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 SEC23BQ15437 767 aa15.23■□□□□ 0.03
PTPN11-207ENST00000639857 MESTQ5EB52 335 aa15.23■□□□□ 0.03
PTPN11-207ENST00000639857 PABPC1L2AQ5JQF8 200 aa15.23■□□□□ 0.03
PTPN11-207ENST00000639857 RGS7BPQ6MZT1 257 aaPredicted RBP15.23■□□□□ 0.03
PTPN11-207ENST00000639857 UNQ6126/PRO20091Q6UXV3 157 aa15.23■□□□□ 0.03
PTPN11-207ENST00000639857 DPY19L2P2Q6ZN68 376 aa15.23■□□□□ 0.03
PTPN11-207ENST00000639857 NSL1Q96IY1 281 aa15.23■□□□□ 0.03
PTPN11-207ENST00000639857 ACTR3BQ9P1U1 418 aa15.23■□□□□ 0.03
PTPN11-207ENST00000639857 GPR160Q9UJ42 338 aa15.23■□□□□ 0.03
PTPN11-207ENST00000639857 ADAM18Q9Y3Q7 739 aa15.23■□□□□ 0.03
PTPN11-207ENST00000639857 V9GYQ6 96 aa15.23■□□□□ 0.03
PTPN11-207ENST00000639857 INAFM1C9JVW0 142 aa15.22■□□□□ 0.03
PTPN11-207ENST00000639857 DIRAS1O95057 198 aa15.22■□□□□ 0.03
PTPN11-207ENST00000639857 ZNF250P15622 560 aa15.22■□□□□ 0.03
PTPN11-207ENST00000639857 STOMP27105 288 aa15.22■□□□□ 0.03
PTPN11-207ENST00000639857 GIFP27352 417 aa15.22■□□□□ 0.03
PTPN11-207ENST00000639857 IFNGR2P38484 337 aa15.22■□□□□ 0.03
PTPN11-207ENST00000639857 NR4A2P43354 598 aa15.22■□□□□ 0.03
PTPN11-207ENST00000639857 RPS6KA3P51812 740 aa15.22■□□□□ 0.03
PTPN11-207ENST00000639857 SELENOVP59797 346 aa15.22■□□□□ 0.03
PTPN11-207ENST00000639857 KRR1Q13601 381 aaKnown RBP15.22■□□□□ 0.03
PTPN11-207ENST00000639857 SGCAQ16586 387 aa15.22■□□□□ 0.03
PTPN11-207ENST00000639857 MSMPQ1L6U9 139 aa15.22■□□□□ 0.03
PTPN11-207ENST00000639857 TMEM249Q2WGJ8 235 aa15.22■□□□□ 0.03
PTPN11-207ENST00000639857 ALDH16A1Q8IZ83 802 aa15.22■□□□□ 0.03
PTPN11-207ENST00000639857 CLDN22Q8N7P3 220 aa15.22■□□□□ 0.03
PTPN11-207ENST00000639857 Q96M85 177 aa15.22■□□□□ 0.03
PTPN11-207ENST00000639857 REV1Q9UBZ9 1251 aa15.22■□□□□ 0.03
PTPN11-207ENST00000639857 IGLV3-9A0A075B6K5 115 aa15.21■□□□□ 0.03
PTPN11-207ENST00000639857 TEX13CA0A0J9YWL9 993 aa15.21■□□□□ 0.03
PTPN11-207ENST00000639857 A0A1W2PPL8 197 aa15.21■□□□□ 0.03
PTPN11-207ENST00000639857 UNC119BA6NIH7 251 aa15.21■□□□□ 0.03
PTPN11-207ENST00000639857 C12orf71A8MTZ7 269 aa15.21■□□□□ 0.03
PTPN11-207ENST00000639857 B2RBV5 119 aa15.21■□□□□ 0.03
PTPN11-207ENST00000639857 ICMTO60725 284 aa15.21■□□□□ 0.03
PTPN11-207ENST00000639857 KRT36O76013 467 aa15.21■□□□□ 0.03
PTPN11-207ENST00000639857 TXNDC12O95881 172 aa15.21■□□□□ 0.03
PTPN11-207ENST00000639857 IGFBP1P08833 259 aaPredicted RBP15.21■□□□□ 0.03
PTPN11-207ENST00000639857 ADRA2AP08913 450 aa15.21■□□□□ 0.03
PTPN11-207ENST00000639857 DAOP14920 347 aa15.21■□□□□ 0.03
PTPN11-207ENST00000639857 FPR3P25089 353 aa15.21■□□□□ 0.03
PTPN11-207ENST00000639857 APEX1P27695 318 aaKnown RBP15.21■□□□□ 0.03
PTPN11-207ENST00000639857 LAP3P28838 519 aa15.21■□□□□ 0.03
PTPN11-207ENST00000639857 MSX2P35548 267 aaPredicted RBP15.21■□□□□ 0.03
PTPN11-207ENST00000639857 UCP2P55851 309 aa15.21■□□□□ 0.03
PTPN11-207ENST00000639857 PSG4Q00888 419 aa15.21■□□□□ 0.03
PTPN11-207ENST00000639857 SMARCD3Q6STE5 483 aa15.21■□□□□ 0.03
PTPN11-207ENST00000639857 ZNF786Q8N393 782 aa15.21■□□□□ 0.03
PTPN11-207ENST00000639857 PAQR4Q8N4S7 273 aaPredicted RBP15.21■□□□□ 0.03
PTPN11-207ENST00000639857 CPEB3Q8NE35 698 aaKnown RBP15.21■□□□□ 0.03
PTPN11-207ENST00000639857 OR52J3Q8NH60 311 aa15.21■□□□□ 0.03
PTPN11-207ENST00000639857 POM121L2Q96KW2 1035 aa15.21■□□□□ 0.03
PTPN11-207ENST00000639857 OR2H1Q9GZK4 316 aa15.21■□□□□ 0.03
PTPN11-207ENST00000639857 POLE4Q9NR33 117 aa15.21■□□□□ 0.03
PTPN11-207ENST00000639857 VSX1Q9NZR4 365 aaPredicted RBP15.21■□□□□ 0.03
PTPN11-207ENST00000639857 PRPF19Q9UMS4 504 aaKnown RBP15.21■□□□□ 0.03
PTPN11-207ENST00000639857 TIMM10BQ9Y5J6 103 aa15.21■□□□□ 0.03
PTPN11-207ENST00000639857 IMPA2O14732 288 aa15.2■□□□□ 0.02
PTPN11-207ENST00000639857 FAM157BP0CG42 384 aa15.2■□□□□ 0.02
PTPN11-207ENST00000639857 RRM2P31350 389 aa15.2■□□□□ 0.02
PTPN11-207ENST00000639857 KLF3P57682 345 aaPredicted RBP15.2■□□□□ 0.02
PTPN11-207ENST00000639857 FXYD6P3P58550 94 aa15.2■□□□□ 0.02
PTPN11-207ENST00000639857 LCN8Q6JVE9 175 aa15.2■□□□□ 0.02
PTPN11-207ENST00000639857 ZDHHC21Q8IVQ6 265 aa15.2■□□□□ 0.02
PTPN11-207ENST00000639857 LINC00471Q8N535 108 aa15.2■□□□□ 0.02
PTPN11-207ENST00000639857 FANK1Q8TC84 345 aa15.2■□□□□ 0.02
PTPN11-207ENST00000639857 C11orf40Q8WZ69 217 aa15.2■□□□□ 0.02
PTPN11-207ENST00000639857 SNX18Q96RF0 628 aa15.2■□□□□ 0.02
PTPN11-207ENST00000639857 SYT3Q9BQG1 590 aa15.2■□□□□ 0.02
PTPN11-207ENST00000639857 C1orf21Q9H246 121 aa15.2■□□□□ 0.02
PTPN11-207ENST00000639857 MAGIXQ9H6Y5 334 aa15.2■□□□□ 0.02
PTPN11-207ENST00000639857 SLCO1C1Q9NYB5 712 aa15.2■□□□□ 0.02
PTPN11-207ENST00000639857 EIF3KQ9UBQ5 218 aaKnown RBP15.2■□□□□ 0.02
PTPN11-207ENST00000639857 ADAM21Q9UKJ8 722 aa15.2■□□□□ 0.02
PTPN11-207ENST00000639857 TMCC3Q9ULS5 477 aa15.2■□□□□ 0.02
PTPN11-207ENST00000639857 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.2■□□□□ 0.027e-16■■□□□ 14.1
PTPN11-207ENST00000639857 SONP18583 2426 aaKnown RBP15.19■□□□□ 0.02
PTPN11-207ENST00000639857 A0A1W2PPW3 197 aa15.19■□□□□ 0.02
PTPN11-207ENST00000639857 H3BSA7 217 aa15.19■□□□□ 0.02
PTPN11-207ENST00000639857 H7C1C5 153 aa15.19■□□□□ 0.02
PTPN11-207ENST00000639857 ARPC3O15145 178 aa15.19■□□□□ 0.02
PTPN11-207ENST00000639857 CRLF1O75462 422 aa15.19■□□□□ 0.02
PTPN11-207ENST00000639857 STAMBPO95630 424 aa15.19■□□□□ 0.02
PTPN11-207ENST00000639857 COX5BP10606 129 aa15.19■□□□□ 0.02
PTPN11-207ENST00000639857 CCL2P13500 99 aa15.19■□□□□ 0.02
PTPN11-207ENST00000639857 SLC6A6P31641 620 aa15.19■□□□□ 0.02
PTPN11-207ENST00000639857 MAGEA2P43356 314 aa15.19■□□□□ 0.02
PTPN11-207ENST00000639857 GZMKP49863 264 aa15.19■□□□□ 0.02
PTPN11-207ENST00000639857 GDI2P50395 445 aaKnown RBP15.19■□□□□ 0.02
PTPN11-207ENST00000639857 HMGA2P52926 109 aa15.19■□□□□ 0.02
PTPN11-207ENST00000639857 LCN6P62502 163 aa15.19■□□□□ 0.02
PTPN11-207ENST00000639857 MRPS11P82912 194 aaKnown RBP15.19■□□□□ 0.02
PTPN11-207ENST00000639857 SCRN3Q0VDG4 424 aa15.19■□□□□ 0.02
PTPN11-207ENST00000639857 ENDOGQ14249 297 aaKnown RBP15.19■□□□□ 0.02
PTPN11-207ENST00000639857 MOGQ16653 247 aa15.19■□□□□ 0.02
PTPN11-207ENST00000639857 C6orf52Q5T4I8 152 aa15.19■□□□□ 0.02
PTPN11-207ENST00000639857 C1orf94Q6P1W5 598 aa15.19■□□□□ 0.02
PTPN11-207ENST00000639857 PGM2L1Q6PCE3 622 aa15.19■□□□□ 0.02
PTPN11-207ENST00000639857 THSD4Q6ZMP0 1018 aa15.19■□□□□ 0.02
PTPN11-207ENST00000639857 ZER1Q7Z7L7 766 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms