RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 ACANP16112 2415 aa3.96□□□□□ -1.78
CUL3-216ENST00000617432 NOTCH3Q9UM47 2321 aa3.96□□□□□ -1.78
CUL3-216ENST00000617432 FLNAP21333 2647 aaKnown RBP3.96□□□□□ -1.78
CUL3-216ENST00000617432 TRAV36DV7A0A075B6V5 113 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 IGHV4-30-2A0A087WSY4 118 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 A0A087WUJ7 227 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 TMEM247A6NEH6 219 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 EVPLLA8MZ36 301 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 INAFM1C9JVW0 142 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 J3KTA2 159 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 M0R3G1 203 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 DNPH1O43598 174 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 DSCAMO60469 2012 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 ZNF432O94892 652 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 CECR9P0C854 216 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 PATE4P0C8F1 98 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 UQCRBP14927 111 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 PCGF2P35227 344 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 RBMXP38159 391 aaKnown RBP3.95□□□□□ -1.78
CUL3-216ENST00000617432 YAP1P46937 504 aaKnown RBP3.95□□□□□ -1.78
CUL3-216ENST00000617432 CLK1P49759 484 aaKnown RBP3.95□□□□□ -1.78
CUL3-216ENST00000617432 RPS4XP62701 263 aaKnown RBP3.95□□□□□ -1.78
CUL3-216ENST00000617432 ARF1P84077 181 aaKnown RBP3.95□□□□□ -1.78
CUL3-216ENST00000617432 ROR2Q01974 943 aaKnown RBP3.95□□□□□ -1.78
CUL3-216ENST00000617432 POU3F1Q03052 451 aaPredicted RBP3.95□□□□□ -1.78
CUL3-216ENST00000617432 RUNX1T1Q06455 604 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 CAMK2DQ13557 499 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 CEACAM16Q2WEN9 425 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 TRMT5Q32P41 509 aaKnown RBP3.95□□□□□ -1.78
CUL3-216ENST00000617432 LRRC23Q53EV4 343 aaPredicted RBP3.95□□□□□ -1.78
CUL3-216ENST00000617432 OTPQ5XKR4 325 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 TMEM225Q6GV28 225 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 NANOGP8Q6NSW7 305 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 SLC22A25Q6T423 547 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 KLHL24Q6TFL4 600 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 CLEC9AQ6UXN8 241 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 NHLRC1Q6VVB1 395 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 C9orf47Q6ZRZ4 202 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 SLC46A3Q7Z3Q1 461 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 NKAIN4Q8IVV8 208 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 TMEM123Q8N131 208 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 LRRC75A-AS1Q8N1F1 130 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 LSMEM1Q8N8F7 131 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 C11orf65Q8NCR3 313 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 MFSD8Q8NHS3 518 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 FGFBP3Q8TAT2 258 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 ADAMTS16Q8TE57 1224 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 TMEM255BQ8WV15 326 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 TMEM171Q8WVE6 324 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 HSD17B8Q92506 261 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 BCL2L2Q92843 193 aaPredicted RBP3.95□□□□□ -1.78
CUL3-216ENST00000617432 SLC38A4Q969I6 547 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 PIGTQ969N2 578 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 LRRC58Q96CX6 371 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 RADILQ96JH8 1075 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 ZNF583Q96ND8 569 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 ZNF317Q96PQ6 595 aaPredicted RBP3.95□□□□□ -1.78
CUL3-216ENST00000617432 OR2M2Q96R28 347 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 PIP5K1AQ99755 562 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 TAPBPLQ9BX59 468 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 CACNG6Q9BXT2 260 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 HDHD5Q9BXW7 423 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 RAD21L1Q9H4I0 556 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 ESRP2Q9H6T0 727 aaKnown RBP3.95□□□□□ -1.78
CUL3-216ENST00000617432 NANOGQ9H9S0 305 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 MEPEQ9NQ76 525 aaPredicted RBP3.95□□□□□ -1.78
CUL3-216ENST00000617432 C20orf141Q9NUB4 165 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 ZNF701Q9NV72 531 aaPredicted RBP3.95□□□□□ -1.78
CUL3-216ENST00000617432 CMTM6Q9NX76 183 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 CISD1Q9NZ45 108 aaKnown RBP3.95□□□□□ -1.78
CUL3-216ENST00000617432 ZNF224Q9NZL3 707 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 RPS6KB2Q9UBS0 482 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 SLC7A7Q9UM01 511 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 B3GALT5Q9Y2C3 310 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 SNX13Q9Y5W8 968 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 ZFHX3Q15911 3703 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 CR1P17927 2039 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 A0A096LNT2 108 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 IGKV1D-43A0A0B4J1Z2 117 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 NME4O00746 187 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 PLPP3O14495 311 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 GPR171O14626 319 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 SSX4O60224 188 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 GPRIN2O60269 458 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 EIF1BO60739 113 aaKnown RBP3.95□□□□□ -1.78
CUL3-216ENST00000617432 GAS8-AS1O95177 125 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 CH25HO95992 272 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 HLA-HP01893 362 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 IGFBP1P08833 259 aaPredicted RBP3.95□□□□□ -1.78
CUL3-216ENST00000617432 NQO1P15559 274 aaKnown RBP3.95□□□□□ -1.78
CUL3-216ENST00000617432 NCK1P16333 377 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 PPIBP23284 216 aaKnown RBP3.95□□□□□ -1.78
CUL3-216ENST00000617432 GTF2E2P29084 291 aaKnown RBP3.95□□□□□ -1.78
CUL3-216ENST00000617432 IDH3GP51553 393 aaPredicted RBP3.95□□□□□ -1.78
CUL3-216ENST00000617432 RIPPLY3P57055 190 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 NCALDP61601 193 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 MYBPC1Q00872 1141 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 VEZF1Q14119 521 aa3.95□□□□□ -1.78
CUL3-216ENST00000617432 HABP2Q14520 560 aaPredicted RBP3.95□□□□□ -1.78
CUL3-216ENST00000617432 ZNF74Q16587 644 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms