RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 FZR1Q9UM11 496 aa15.9■□□□□ 0.14
SHKBP1-202ENST00000593764 IER3IP1Q9Y5U9 82 aa15.9■□□□□ 0.14
SHKBP1-202ENST00000593764 FKBP7Q9Y680 259 aa15.9■□□□□ 0.14
SHKBP1-202ENST00000593764 SONP18583 2426 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-202ENST00000593764 CHD3Q12873 2000 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-202ENST00000593764 IQCMA0A1B0GVH7 501 aa15.89■□□□□ 0.13
SHKBP1-202ENST00000593764 XKRYO14609 159 aa15.89■□□□□ 0.13
SHKBP1-202ENST00000593764 TXNDC12O95881 172 aa15.89■□□□□ 0.13
SHKBP1-202ENST00000593764 ADRA2AP08913 450 aa15.89■□□□□ 0.13
SHKBP1-202ENST00000593764 CST2P09228 141 aa15.89■□□□□ 0.13
SHKBP1-202ENST00000593764 FAM157BP0CG42 384 aa15.89■□□□□ 0.13
SHKBP1-202ENST00000593764 CTLA4P16410 223 aa15.89■□□□□ 0.13
SHKBP1-202ENST00000593764 MAGEA2P43356 314 aa15.89■□□□□ 0.13
SHKBP1-202ENST00000593764 ENDOGQ14249 297 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-202ENST00000593764 TBC1D28Q2M2D7 210 aa15.89■□□□□ 0.13
SHKBP1-202ENST00000593764 MTX3Q5HYI7 312 aa15.89■□□□□ 0.13
SHKBP1-202ENST00000593764 GPR139Q6DWJ6 353 aa15.89■□□□□ 0.13
SHKBP1-202ENST00000593764 LCN8Q6JVE9 175 aa15.89■□□□□ 0.13
SHKBP1-202ENST00000593764 SMARCD3Q6STE5 483 aa15.89■□□□□ 0.13
SHKBP1-202ENST00000593764 PTCHD4Q6ZW05 846 aa15.89■□□□□ 0.13
SHKBP1-202ENST00000593764 SYT3Q9BQG1 590 aa15.89■□□□□ 0.13
SHKBP1-202ENST00000593764 NDEL1Q9GZM8 345 aa15.89■□□□□ 0.13
SHKBP1-202ENST00000593764 RAB1BQ9H0U4 201 aa15.89■□□□□ 0.13
SHKBP1-202ENST00000593764 WNT5BQ9H1J7 359 aa15.89■□□□□ 0.13
SHKBP1-202ENST00000593764 C1orf21Q9H246 121 aa15.89■□□□□ 0.13
SHKBP1-202ENST00000593764 MUC13Q9H3R2 512 aa15.89■□□□□ 0.13
SHKBP1-202ENST00000593764 CDH20Q9HBT6 801 aa15.89■□□□□ 0.13
SHKBP1-202ENST00000593764 POLE4Q9NR33 117 aa15.89■□□□□ 0.13
SHKBP1-202ENST00000593764 MYEF2Q9P2K5 600 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-202ENST00000593764 YLPM1P49750 1951 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-202ENST00000593764 LOC100509620A0A075B734 347 aa15.88■□□□□ 0.13
SHKBP1-202ENST00000593764 A0A1W2PPL8 197 aa15.88■□□□□ 0.13
SHKBP1-202ENST00000593764 VWC2LB2RUY7 222 aa15.88■□□□□ 0.13
SHKBP1-202ENST00000593764 SYNGR3O43761 229 aa15.88■□□□□ 0.13
SHKBP1-202ENST00000593764 OR10H3O60404 316 aa15.88■□□□□ 0.13
SHKBP1-202ENST00000593764 CSF3P09919 207 aa15.88■□□□□ 0.13
SHKBP1-202ENST00000593764 SLC25A16P16260 332 aa15.88■□□□□ 0.13
SHKBP1-202ENST00000593764 MSR1P21757 451 aa15.88■□□□□ 0.13
SHKBP1-202ENST00000593764 FPR3P25089 353 aa15.88■□□□□ 0.13
SHKBP1-202ENST00000593764 STOMP27105 288 aa15.88■□□□□ 0.13
SHKBP1-202ENST00000593764 PCSK6P29122 969 aa15.88■□□□□ 0.13
SHKBP1-202ENST00000593764 CDKN2AP42771 156 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-202ENST00000593764 GSSP48637 474 aa15.88■□□□□ 0.13
SHKBP1-202ENST00000593764 UCP2P55851 309 aa15.88■□□□□ 0.13
SHKBP1-202ENST00000593764 RPS23P62266 143 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-202ENST00000593764 HSF2Q03933 536 aa15.88■□□□□ 0.13
SHKBP1-202ENST00000593764 KRR1Q13601 381 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-202ENST00000593764 RFX4Q33E94 735 aa15.88■□□□□ 0.13
SHKBP1-202ENST00000593764 C1orf94Q6P1W5 598 aa15.88■□□□□ 0.13
SHKBP1-202ENST00000593764 UGT2A3Q6UWM9 527 aa15.88■□□□□ 0.13
SHKBP1-202ENST00000593764 DHFR2Q86XF0 187 aa15.88■□□□□ 0.13
SHKBP1-202ENST00000593764 OR1J2Q8NGS2 313 aa15.88■□□□□ 0.13
SHKBP1-202ENST00000593764 AKR7LQ8NHP1 331 aa15.88■□□□□ 0.13
SHKBP1-202ENST00000593764 BCAS4Q8TDM0 211 aa15.88■□□□□ 0.13
SHKBP1-202ENST00000593764 CLPTM1LQ96KA5 538 aa15.88■□□□□ 0.13
SHKBP1-202ENST00000593764 POM121L2Q96KW2 1035 aa15.88■□□□□ 0.13
SHKBP1-202ENST00000593764 ZNF416Q9BWM5 594 aa15.88■□□□□ 0.13
SHKBP1-202ENST00000593764 OR2H1Q9GZK4 316 aa15.88■□□□□ 0.13
SHKBP1-202ENST00000593764 VSX1Q9NZR4 365 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-202ENST00000593764 PRPF19Q9UMS4 504 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-202ENST00000593764 LYVE1Q9Y5Y7 322 aa15.88■□□□□ 0.13
SHKBP1-202ENST00000593764 SOCS2O14508 198 aa15.87■□□□□ 0.13
SHKBP1-202ENST00000593764 KRT36O76013 467 aa15.87■□□□□ 0.13
SHKBP1-202ENST00000593764 APEHP13798 732 aaKnown RBP15.87■□□□□ 0.13
SHKBP1-202ENST00000593764 APLNRP35414 380 aa15.87■□□□□ 0.13
SHKBP1-202ENST00000593764 GUCA1AP43080 201 aaPredicted RBP15.87■□□□□ 0.13
SHKBP1-202ENST00000593764 PDLIM4P50479 330 aa15.87■□□□□ 0.13
SHKBP1-202ENST00000593764 ERVS71-1P61550 626 aa15.87■□□□□ 0.13
SHKBP1-202ENST00000593764 LOXL1Q08397 574 aaPredicted RBP15.87■□□□□ 0.13
SHKBP1-202ENST00000593764 PGBD2Q6P3X8 592 aa15.87■□□□□ 0.13
SHKBP1-202ENST00000593764 TRPM8Q7Z2W7 1104 aa15.87■□□□□ 0.13
SHKBP1-202ENST00000593764 OR4C15Q8NGM1 316 aa15.87■□□□□ 0.13
SHKBP1-202ENST00000593764 NEU4Q8WWR8 484 aaPredicted RBP15.87■□□□□ 0.13
SHKBP1-202ENST00000593764 FOXN4Q96NZ1 517 aa15.87■□□□□ 0.13
SHKBP1-202ENST00000593764 SYT4Q9H2B2 425 aa15.87■□□□□ 0.13
SHKBP1-202ENST00000593764 LRMDAQ9H2I8 198 aa15.87■□□□□ 0.13
SHKBP1-202ENST00000593764 OR51B6Q9H340 312 aa15.87■□□□□ 0.13
SHKBP1-202ENST00000593764 OR52D1Q9H346 318 aa15.87■□□□□ 0.13
SHKBP1-202ENST00000593764 MAGIXQ9H6Y5 334 aa15.87■□□□□ 0.13
SHKBP1-202ENST00000593764 DYNLRB1Q9NP97 96 aa15.87■□□□□ 0.13
SHKBP1-202ENST00000593764 EMC7Q9NPA0 242 aa15.87■□□□□ 0.13
SHKBP1-202ENST00000593764 REV1Q9UBZ9 1251 aa15.87■□□□□ 0.13
SHKBP1-202ENST00000593764 TMCC3Q9ULS5 477 aa15.87■□□□□ 0.13
SHKBP1-202ENST00000593764 TIMM10BQ9Y5J6 103 aa15.87■□□□□ 0.13
SHKBP1-202ENST00000593764 INAFM1C9JVW0 142 aa15.86■□□□□ 0.13
SHKBP1-202ENST00000593764 SLC16A7O60669 478 aa15.86■□□□□ 0.13
SHKBP1-202ENST00000593764 PPP1R3DO95685 299 aa15.86■□□□□ 0.13
SHKBP1-202ENST00000593764 CLPTM1O96005 669 aa15.86■□□□□ 0.13
SHKBP1-202ENST00000593764 ZNF250P15622 560 aa15.86■□□□□ 0.13
SHKBP1-202ENST00000593764 WNT5AP41221 380 aa15.86■□□□□ 0.13
SHKBP1-202ENST00000593764 RAD52P43351 418 aa15.86■□□□□ 0.13
SHKBP1-202ENST00000593764 ALDH3B1P43353 468 aa15.86■□□□□ 0.13
SHKBP1-202ENST00000593764 RPS6KA3P51812 740 aa15.86■□□□□ 0.13
SHKBP1-202ENST00000593764 PCBD1P61457 104 aa15.86■□□□□ 0.13
SHKBP1-202ENST00000593764 TSPAN31Q12999 210 aa15.86■□□□□ 0.13
SHKBP1-202ENST00000593764 ZNF770Q6IQ21 691 aaPredicted RBP15.86■□□□□ 0.13
SHKBP1-202ENST00000593764 RGS7BPQ6MZT1 257 aaPredicted RBP15.86■□□□□ 0.13
SHKBP1-202ENST00000593764 SYT9Q86SS6 491 aa15.86■□□□□ 0.13
SHKBP1-202ENST00000593764 ADCK1Q86TW2 530 aa15.86■□□□□ 0.13
SHKBP1-202ENST00000593764 FANK1Q8TC84 345 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms