RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-222ENST00000524006 OR11G2Q8NGC1 345 aa9.66□□□□□ -0.86
SPIDR-222ENST00000524006 OR2AJ1Q8NGZ0 328 aa9.66□□□□□ -0.86
SPIDR-222ENST00000524006 CT55Q8WUE5 264 aa9.66□□□□□ -0.86
SPIDR-222ENST00000524006 C15orf40Q8WUR7 153 aa9.66□□□□□ -0.86
SPIDR-222ENST00000524006 ARL5BQ96KC2 179 aa9.66□□□□□ -0.86
SPIDR-222ENST00000524006 C4orf45Q96LM5 186 aa9.66□□□□□ -0.86
SPIDR-222ENST00000524006 CMTM3Q96MX0 182 aa9.66□□□□□ -0.86
SPIDR-222ENST00000524006 UBL7Q96S82 380 aaPredicted RBP9.66□□□□□ -0.86
SPIDR-222ENST00000524006 CDC6Q99741 560 aa9.66□□□□□ -0.86
SPIDR-222ENST00000524006 WACQ9BTA9 647 aa9.66□□□□□ -0.86
SPIDR-222ENST00000524006 MFRPQ9BY79 579 aa9.66□□□□□ -0.86
SPIDR-222ENST00000524006 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.66□□□□□ -0.86
SPIDR-222ENST00000524006 C11orf54Q9H0W9 315 aaPredicted RBP9.66□□□□□ -0.86
SPIDR-222ENST00000524006 TSPAN10Q9H1Z9 355 aaPredicted RBP9.66□□□□□ -0.86
SPIDR-222ENST00000524006 SLCO1C1Q9NYB5 712 aa9.66□□□□□ -0.86
SPIDR-222ENST00000524006 ZNF221Q9UK13 617 aa9.66□□□□□ -0.86
SPIDR-222ENST00000524006 SPATA2Q9UM82 520 aa9.66□□□□□ -0.86
SPIDR-222ENST00000524006 DHDHQ9UQ10 334 aa9.66□□□□□ -0.86
SPIDR-222ENST00000524006 RPH3AQ9Y2J0 694 aaPredicted RBP9.66□□□□□ -0.86
SPIDR-222ENST00000524006 COA3Q9Y2R0 106 aaPredicted RBP9.66□□□□□ -0.86
SPIDR-222ENST00000524006 B3GALT1Q9Y5Z6 326 aa9.66□□□□□ -0.86
SPIDR-222ENST00000524006 ETV7Q9Y603 341 aa9.66□□□□□ -0.86
SPIDR-222ENST00000524006 SDK2Q58EX2 2172 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 CCDC187A0A096LP49 1063 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 A0A0G2JK05 382 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 AIPO00170 330 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 ETV2O00321 342 aaPredicted RBP9.65□□□□□ -0.86
SPIDR-222ENST00000524006 GPR171O14626 319 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 EEF1E1O43324 174 aaKnown RBP9.65□□□□□ -0.86
SPIDR-222ENST00000524006 ORC5O43913 435 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 UPK3AO75631 287 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 CCNKO75909 580 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 UBL3O95164 117 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 ABHD16AO95870 558 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 GPANK1O95872 356 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 HLA-DQB1P01920 261 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 CELA2AP08217 269 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 RAB40ALP0C0E4 278 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 ZNF17P17021 662 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 ZNF43P17038 809 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 ATF1P18846 271 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 IL11P20809 199 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 THBS2P35442 1172 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 PTGDSP41222 190 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 RPS27P42677 84 aaKnown RBP9.65□□□□□ -0.86
SPIDR-222ENST00000524006 CCR9P51686 369 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 DSCR4P56555 118 aaPredicted RBP9.65□□□□□ -0.86
SPIDR-222ENST00000524006 MLF1P58340 268 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 AP3S2P59780 193 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 NANOS3P60323 173 aaKnown RBP9.65□□□□□ -0.86
SPIDR-222ENST00000524006 CSNK2A1P68400 391 aaPredicted RBP9.65□□□□□ -0.86
SPIDR-222ENST00000524006 INSM1Q01101 510 aaPredicted RBP9.65□□□□□ -0.86
SPIDR-222ENST00000524006 P2RY14Q15391 338 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 CARTPTQ16568 116 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 ODF4Q2M2E3 257 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 TMEM176BQ3YBM2 270 aaPredicted RBP9.65□□□□□ -0.86
SPIDR-222ENST00000524006 RNASE12Q5GAN4 147 aaKnown RBP9.65□□□□□ -0.86
SPIDR-222ENST00000524006 ZNF684Q5T5D7 378 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 AGAP6Q5VW22 663 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 TMEM81Q6P7N7 255 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 UNQ9370/PRO34162Q6UXP9 181 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 LINGO2Q7L985 606 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 KRT74Q7RTS7 529 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 KDM8Q8N371 416 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 ESX1Q8N693 406 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 CELF2-AS1Q8N7Q2 184 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 FADS6Q8N9I5 356 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 RPS4Y2Q8TD47 263 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 UBASH3BQ8TF42 649 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 IMMP1LQ96LU5 166 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 FRMD6Q96NE9 622 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 AGAP4Q96P64 663 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 NEURL2Q9BR09 285 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 PPIL3Q9H2H8 161 aaKnown RBP9.65□□□□□ -0.86
SPIDR-222ENST00000524006 RNF121Q9H920 327 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 B3GAT2Q9NPZ5 323 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 DDX28Q9NUL7 540 aaKnown RBP9.65□□□□□ -0.86
SPIDR-222ENST00000524006 MED29Q9NX70 200 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 FBXL2Q9UKC9 423 aa9.65□□□□□ -0.86
SPIDR-222ENST00000524006 MRPS7Q9Y2R9 242 aaKnown RBP9.65□□□□□ -0.86
SPIDR-222ENST00000524006 CHCHD2Q9Y6H1 151 aaPredicted RBP9.65□□□□□ -0.86
SPIDR-222ENST00000524006 NCKAP5O14513 1909 aa9.64□□□□□ -0.87
SPIDR-222ENST00000524006 DOCK10Q96BY6 2186 aa9.64□□□□□ -0.87
SPIDR-222ENST00000524006 TRBV5-5A0A0J9YX44 114 aa9.64□□□□□ -0.87
SPIDR-222ENST00000524006 SPAARA0A1B0GVQ0 90 aa9.64□□□□□ -0.87
SPIDR-222ENST00000524006 A0A1W2PNR3 127 aa9.64□□□□□ -0.87
SPIDR-222ENST00000524006 TMEM8BA6NDV4 472 aa9.64□□□□□ -0.87
SPIDR-222ENST00000524006 TRABD2BA6NFA1 517 aa9.64□□□□□ -0.87
SPIDR-222ENST00000524006 OR4C45A6NMZ5 311 aa9.64□□□□□ -0.87
SPIDR-222ENST00000524006 IFITM5A6NNB3 132 aa9.64□□□□□ -0.87
SPIDR-222ENST00000524006 PRR32B1ATL7 298 aa9.64□□□□□ -0.87
SPIDR-222ENST00000524006 NPIPA2E9PIF3 369 aa9.64□□□□□ -0.87
SPIDR-222ENST00000524006 NPIPA3F8WFD2 350 aa9.64□□□□□ -0.87
SPIDR-222ENST00000524006 MS4A18H0YCH9 400 aa9.64□□□□□ -0.87
SPIDR-222ENST00000524006 EIF1AYO14602 144 aaKnown RBP9.64□□□□□ -0.87
SPIDR-222ENST00000524006 AQP8O94778 261 aa9.64□□□□□ -0.87
SPIDR-222ENST00000524006 PAHP00439 452 aa9.64□□□□□ -0.87
SPIDR-222ENST00000524006 UBCP0CG48 685 aaKnown RBP9.64□□□□□ -0.87
SPIDR-222ENST00000524006 CALCBP10092 127 aa9.64□□□□□ -0.87
SPIDR-222ENST00000524006 LIFP15018 202 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms