RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 LAP3P28838 519 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 MSX2P35548 267 aaPredicted RBP7.87□□□□□ -1.15
HDAC6-232ENST00000489053 ALDH3B1P43353 468 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 NR4A2P43354 598 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 LCN6P62502 163 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 LSM11P83369 360 aaKnown RBP eCLIP7.87□□□□□ -1.15
HDAC6-232ENST00000489053 SCRN3Q0VDG4 424 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 KRR1Q13601 381 aaKnown RBP7.87□□□□□ -1.15
HDAC6-232ENST00000489053 HIST3H3Q16695 136 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 ALKBH6Q3KRA9 238 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 CHRFAM7AQ494W8 412 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 MTX3Q5HYI7 312 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 PIGWQ7Z7B1 504 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 ADCK1Q86TW2 530 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 ZNF519Q8TB69 540 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 SLC7A13Q8TCU3 470 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 UBASH3BQ8TF42 649 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 NSL1Q96IY1 281 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 FOXN4Q96NZ1 517 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 CCT8L2Q96SF2 557 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 SEPHS2Q99611 448 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 DOK1Q99704 481 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 IFT27Q9BW83 186 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 MRPL37Q9BZE1 423 aaKnown RBP7.87□□□□□ -1.15
HDAC6-232ENST00000489053 TRIM15Q9C019 465 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 DECR2Q9NUI1 292 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 ARL8BQ9NVJ2 186 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 TAAR3PQ9P1P4 343 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 NDRG4Q9ULP0 352 aaKnown RBP7.87□□□□□ -1.15
HDAC6-232ENST00000489053 KCNS2Q9ULS6 477 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 ADAM18Q9Y3Q7 739 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 TEX13CA0A0J9YWL9 993 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 LOC100289279A0A1B0GTE1 492 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 PRSS37A4D1T9 235 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 SOCS2O14508 198 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 KHDRBS3O75525 346 aaKnown RBP7.86□□□□□ -1.15
HDAC6-232ENST00000489053 SNAP29O95721 258 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 RENP00797 406 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 APEX1P27695 318 aaKnown RBP7.86□□□□□ -1.15
HDAC6-232ENST00000489053 SDHAP31040 664 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 RRM2P31350 389 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 SLC6A6P31641 620 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 CHN2P52757 468 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 TEKQ02763 1124 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 GLO1Q04760 184 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 PCGF3Q3KNV8 242 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 KRTAP21-3Q3LHN1 58 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 ZNF718Q3SXZ3 478 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 ZMAT1Q5H9K5 638 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 FAM27BQ5VT28 67 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 FAM166AQ6J272 317 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 SLC25A47Q6Q0C1 308 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 SMARCD3Q6STE5 483 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 DPY19L2P2Q6ZN68 376 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 DNM1P46Q6ZS02 220 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.86□□□□□ -1.15
HDAC6-232ENST00000489053 ZNF584Q8IVC4 421 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 ZDHHC21Q8IVQ6 265 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 GLB1L2Q8IW92 636 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 C1orf174Q8IYL3 243 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 ARHGAP24Q8N264 748 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 ZCCHC24Q8N2G6 241 aaKnown RBP7.86□□□□□ -1.15
HDAC6-232ENST00000489053 CPEB3Q8NE35 698 aaKnown RBP7.86□□□□□ -1.15
HDAC6-232ENST00000489053 OR52L1Q8NGH7 329 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 OR1J1Q8NGS3 322 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 AKR7LQ8NHP1 331 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 FGFBP3Q8TAT2 258 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 ABHD4Q8TB40 342 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 POP5Q969H6 163 aaKnown RBP7.86□□□□□ -1.15
HDAC6-232ENST00000489053 Q96M85 177 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 BEX2Q9BXY8 128 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 OR2H1Q9GZK4 316 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 SHARPINQ9H0F6 387 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 HEATR1Q9H583 2144 aaKnown RBP7.86□□□□□ -1.15
HDAC6-232ENST00000489053 CHODLQ9H9P2 273 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 ELOVL3Q9HB03 270 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 HINT3Q9NQE9 182 aaKnown RBP7.86□□□□□ -1.15
HDAC6-232ENST00000489053 ZNF224Q9NZL3 707 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 IL20RAQ9UHF4 553 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 CDC42EP3Q9UKI2 254 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 ADAM21Q9UKJ8 722 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 IER3IP1Q9Y5U9 82 aa7.86□□□□□ -1.15
HDAC6-232ENST00000489053 TRBV4-1A0A0J9YWV2 114 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 CDC42EP2O14613 210 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 PPIHO43447 177 aaKnown RBP7.85□□□□□ -1.15
HDAC6-232ENST00000489053 SLC16A7O60669 478 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 CRLF1O75462 422 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 KRT36O76013 467 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 PRSS23O95084 383 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 ABHD16AO95870 558 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 FAM107AO95990 144 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 TSPAN19P0C672 248 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 NAT2P11245 290 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 ZNF16P17020 682 aaPredicted RBP7.85□□□□□ -1.15
HDAC6-232ENST00000489053 GSTM3P21266 225 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 PCMT1P22061 227 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 CALB2P22676 271 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 CRABP1P29762 137 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 GPR6P46095 362 aaPredicted RBP7.85□□□□□ -1.15
HDAC6-232ENST00000489053 HTR5AP47898 357 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms