RNA–Protein interactions for RNA: YPL173W

MRPL40, Transcript of Mitochondrial ribosomal protein of the large subunit, yeastyeast

Gene MRPL40, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRPL40YPL173W GPG1P53130 126 aa3.85□□□□□ -1.79
MRPL40YPL173W YGR283CP53336 341 aaPredicted RBP3.85□□□□□ -1.79
MRPL40YPL173W PHR1P05066 565 aaKnown RBP RIP-Chip data3.84□□□□□ -1.79not detected
MRPL40YPL173W REC104P33323 182 aa3.84□□□□□ -1.79
MRPL40YPL173W MTC2P34246 357 aa3.84□□□□□ -1.79
MRPL40YPL173W YJR008WP47085 338 aa3.84□□□□□ -1.79
MRPL40YPL173W RIA1P53893 1110 aa3.84□□□□□ -1.79
MRPL40YPL173W ATP25Q03153 612 aa3.84□□□□□ -1.79
MRPL40YPL173W ENV7Q12003 364 aa3.84□□□□□ -1.79
MRPL40YPL173W PRP4P20053 465 aaKnown RBP3.83□□□□□ -1.8
MRPL40YPL173W SCT1P32784 759 aa3.83□□□□□ -1.8
MRPL40YPL173W EMC3P36039 253 aa3.83□□□□□ -1.8
MRPL40YPL173W PAF1P38351 445 aa3.83□□□□□ -1.8
MRPL40YPL173W RPP1P38786 293 aa3.83□□□□□ -1.8
MRPL40YPL173W YIL108WP40483 696 aaKnown RBP3.83□□□□□ -1.8
MRPL40YPL173W HLJ1P48353 224 aa3.83□□□□□ -1.8
MRPL40YPL173W CRR1Q05790 422 aa3.83□□□□□ -1.8
MRPL40YPL173W SRD1P09007 221 aa3.82□□□□□ -1.8
MRPL40YPL173W GSY1P23337 708 aa3.82□□□□□ -1.8
MRPL40YPL173W PCL2P25693 308 aa3.82□□□□□ -1.8
MRPL40YPL173W ENP1P38333 483 aaKnown RBP3.82□□□□□ -1.8
MRPL40YPL173W MGS1P40151 587 aa3.82□□□□□ -1.8
MRPL40YPL173W PMT3P47190 753 aa3.82□□□□□ -1.8
MRPL40YPL173W CCM1P48237 864 aaPredicted RBP3.82□□□□□ -1.8
MRPL40YPL173W YGR237CP50089 785 aa3.82□□□□□ -1.8
MRPL40YPL173W THI73Q07904 523 aa3.82□□□□□ -1.8
MRPL40YPL173W MET13P53128 600 aa3.81□□□□□ -1.8
MRPL40YPL173W VPS30Q02948 557 aa3.81□□□□□ -1.8
MRPL40YPL173W UME1Q03010 460 aa3.81□□□□□ -1.8
MRPL40YPL173W RSC3Q06639 885 aa3.81□□□□□ -1.8
MRPL40YPL173W MET7Q08645 548 aa3.81□□□□□ -1.8
MRPL40YPL173W RAD18P10862 487 aa3.8□□□□□ -1.8
MRPL40YPL173W SSD1P24276 1250 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
MRPL40YPL173W MRC1P25588 1096 aa3.8□□□□□ -1.8
MRPL40YPL173W YEL1P34225 687 aa3.8□□□□□ -1.8
MRPL40YPL173W CAF16P43569 289 aa3.8□□□□□ -1.8
MRPL40YPL173W HXT16P47185 567 aa3.8□□□□□ -1.8
MRPL40YPL173W DAM1P53267 343 aa3.8□□□□□ -1.8
MRPL40YPL173W SDA1P53313 767 aaKnown RBP3.8□□□□□ -1.8
MRPL40YPL173W TMA17Q12513 150 aa3.8□□□□□ -1.8
MRPL40YPL173W NUP145P49687 1317 aa3.79□□□□□ -1.8
MRPL40YPL173W SFL1P20134 766 aa3.79□□□□□ -1.8
MRPL40YPL173W MCD4P36051 919 aa3.79□□□□□ -1.8
MRPL40YPL173W TYS1P36421 394 aaKnown RBP3.79□□□□□ -1.8
MRPL40YPL173W GPP1P41277 250 aaKnown RBP3.79□□□□□ -1.8
MRPL40YPL173W YJR120WP47157 116 aa3.79□□□□□ -1.8
MRPL40YPL173W AMA1P50082 593 aa3.79□□□□□ -1.8
MRPL40YPL173W FOL1P53848 824 aa3.79□□□□□ -1.8
MRPL40YPL173W IRC13Q08630 104 aa3.79□□□□□ -1.8
MRPL40YPL173W MPH2P0CD99 609 aa3.78□□□□□ -1.8
MRPL40YPL173W MIH1P23748 554 aa3.78□□□□□ -1.8
MRPL40YPL173W PER1P25625 357 aa3.78□□□□□ -1.8
MRPL40YPL173W TYE7P33122 291 aaPredicted RBP3.78□□□□□ -1.8
MRPL40YPL173W STO1P34160 861 aaKnown RBP3.78□□□□□ -1.8
MRPL40YPL173W PCM1P38628 557 aaKnown RBP3.78□□□□□ -1.8
MRPL40YPL173W YHR078WP38799 552 aa3.78□□□□□ -1.8
MRPL40YPL173W RTS3P53289 263 aa3.78□□□□□ -1.8
MRPL40YPL173W ASI2P53895 289 aa3.78□□□□□ -1.8
MRPL40YPL173W YKR011CQ02209 353 aa3.78□□□□□ -1.8
MRPL40YPL173W MTQ2Q03920 221 aaPredicted RBP3.78□□□□□ -1.8
MRPL40YPL173W SGO1Q08490 590 aa3.78□□□□□ -1.8
MRPL40YPL173W DMC1P25453 334 aa3.77□□□□□ -1.81
MRPL40YPL173W YJR096WP47137 282 aa3.77□□□□□ -1.81
MRPL40YPL173W NIT3P49954 291 aa3.77□□□□□ -1.81
MRPL40YPL173W SCS3P53012 380 aa3.77□□□□□ -1.81
MRPL40YPL173W TAD1P53065 400 aa3.77□□□□□ -1.81
MRPL40YPL173W PUS2P53167 370 aa3.77□□□□□ -1.81
MRPL40YPL173W PEX8P53248 589 aa3.77□□□□□ -1.81
MRPL40YPL173W HDA1P53973 706 aa3.77□□□□□ -1.81
MRPL40YPL173W APM1Q00776 475 aaPredicted RBP3.77□□□□□ -1.81
MRPL40YPL173W SNP1Q00916 300 aaPredicted RBP3.77□□□□□ -1.81
MRPL40YPL173W LRS4Q04087 347 aaKnown RBP3.77□□□□□ -1.81
MRPL40YPL173W YDR514CQ04408 483 aa3.77□□□□□ -1.81
MRPL40YPL173W COG8Q04632 607 aa3.77□□□□□ -1.81
MRPL40YPL173W ATG33Q06485 197 aa3.77□□□□□ -1.81
MRPL40YPL173W MRI1Q06489 411 aaKnown RBP3.77□□□□□ -1.81
MRPL40YPL173W YOL057WQ08225 711 aa3.77□□□□□ -1.81
MRPL40YPL173W FAP7Q12055 197 aaPredicted RBP3.77□□□□□ -1.81
MRPL40YPL173W HMG1P12683 1054 aa3.76□□□□□ -1.81
MRPL40YPL173W DAL7P21826 554 aa3.76□□□□□ -1.81
MRPL40YPL173W YCL002CP25565 263 aa3.76□□□□□ -1.81
MRPL40YPL173W URA1P28272 314 aaPredicted RBP3.76□□□□□ -1.81
MRPL40YPL173W EUG1P32474 517 aa3.76□□□□□ -1.81
MRPL40YPL173W HOG1P32485 435 aa3.76□□□□□ -1.81
MRPL40YPL173W EMP70P32802 667 aa3.76□□□□□ -1.81
MRPL40YPL173W VHR1P40522 640 aa3.76□□□□□ -1.81
MRPL40YPL173W AIM14P53109 570 aa3.76□□□□□ -1.81
MRPL40YPL173W COG6P53959 839 aa3.76□□□□□ -1.81
MRPL40YPL173W REH1Q06709 432 aa3.76□□□□□ -1.81
MRPL40YPL173W TAF3Q12297 353 aa3.76□□□□□ -1.81
MRPL40YPL173W YBR071WP38243 211 aa3.75□□□□□ -1.81
MRPL40YPL173W YIR042CP40586 236 aa3.75□□□□□ -1.81
MRPL40YPL173W CCT7P42943 550 aaKnown RBP3.75□□□□□ -1.81
MRPL40YPL173W HFD1Q04458 532 aa3.75□□□□□ -1.81
MRPL40YPL173W YDR338CQ05497 695 aa3.75□□□□□ -1.81
MRPL40YPL173W YBR182C-AQ8TGU6 64 aa3.75□□□□□ -1.81
MRPL40YPL173W RFA1P22336 621 aaKnown RBP3.74□□□□□ -1.81
MRPL40YPL173W SPO11P23179 398 aa3.74□□□□□ -1.81
MRPL40YPL173W YUR1P26725 428 aa3.74□□□□□ -1.81
MRPL40YPL173W ORC2P32833 620 aa3.74□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 37.8 ms