RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W ATG11Q12527 1178 aa6.18□□□□□ -1.42
VAM3YOR106W HOG1P32485 435 aa6.17□□□□□ -1.42
VAM3YOR106W HSL7P38274 827 aa6.17□□□□□ -1.42
VAM3YOR106W YHL017WP38745 532 aa6.17□□□□□ -1.42
VAM3YOR106W NHX1Q04121 633 aa6.17□□□□□ -1.42
VAM3YOR106W HBT1Q07653 1046 aaKnown RBP6.17□□□□□ -1.42
VAM3YOR106W YLR149CQ99296 730 aa6.17□□□□□ -1.42
VAM3YOR106W PPG1P32838 368 aa6.16□□□□□ -1.42
VAM3YOR106W HIS7P33734 552 aaKnown RBP6.16□□□□□ -1.42
VAM3YOR106W ECM1P39715 212 aa6.16□□□□□ -1.42
VAM3YOR106W DOT6P40059 670 aaKnown RBP6.16□□□□□ -1.42
VAM3YOR106W IRC13Q08630 104 aa6.16□□□□□ -1.42
VAM3YOR106W Q0142Q9ZZW4 58 aa6.16□□□□□ -1.42
VAM3YOR106W RAD18P10862 487 aa6.15□□□□□ -1.42
VAM3YOR106W APT2P36973 181 aa6.15□□□□□ -1.42
VAM3YOR106W TMN2Q04562 672 aa6.15□□□□□ -1.42
VAM3YOR106W RPN7Q06103 429 aaKnown RBP6.15□□□□□ -1.42
VAM3YOR106W NTG2Q08214 380 aa6.15□□□□□ -1.42
VAM3YOR106W YKR051WP36142 418 aa6.14□□□□□ -1.43
VAM3YOR106W STU2P46675 888 aa6.14□□□□□ -1.43
VAM3YOR106W TEX1P53851 422 aaKnown RBP6.14□□□□□ -1.43
VAM3YOR106W RIA1P53893 1110 aa6.14□□□□□ -1.43
VAM3YOR106W ORC1P54784 914 aaPredicted RBP6.14□□□□□ -1.43
VAM3YOR106W MIP6P38760 659 aaKnown RBP6.13□□□□□ -1.43
VAM3YOR106W BCD1P38772 366 aa6.13□□□□□ -1.43
VAM3YOR106W HOS4P40480 1083 aa6.13□□□□□ -1.43
VAM3YOR106W TAD3Q9URQ3 322 aa6.13□□□□□ -1.43
VAM3YOR106W ADE2P21264 571 aaKnown RBP6.12□□□□□ -1.43
VAM3YOR106W APL2P36000 726 aaPredicted RBP6.12□□□□□ -1.43
VAM3YOR106W RRP14P36080 434 aaKnown RBP6.12□□□□□ -1.43
VAM3YOR106W CTK1Q03957 528 aaKnown RBP6.12□□□□□ -1.43
VAM3YOR106W COG8Q04632 607 aa6.12□□□□□ -1.43
VAM3YOR106W YEL1P34225 687 aa6.11□□□□□ -1.43
VAM3YOR106W PCL5P38794 229 aa6.11□□□□□ -1.43
VAM3YOR106W FMP52P40008 231 aa6.11□□□□□ -1.43
VAM3YOR106W PCL10P53124 433 aa6.11□□□□□ -1.43
VAM3YOR106W RNH70P53331 553 aa6.11□□□□□ -1.43
VAM3YOR106W ARG5,6Q01217 863 aa6.11□□□□□ -1.43
VAM3YOR106W MCM21Q06675 368 aa6.11□□□□□ -1.43
VAM3YOR106W SGO1Q08490 590 aa6.11□□□□□ -1.43
VAM3YOR106W MIH1P23748 554 aa6.1□□□□□ -1.43
VAM3YOR106W YKR018CP36114 725 aa6.1□□□□□ -1.43
VAM3YOR106W TRZ1P36159 838 aaPredicted RBP6.1□□□□□ -1.43
VAM3YOR106W YHR112CP38716 378 aa6.1□□□□□ -1.43
VAM3YOR106W REV7P38927 245 aa6.1□□□□□ -1.43
VAM3YOR106W CCT3P39077 534 aaKnown RBP6.1□□□□□ -1.43
VAM3YOR106W SDS3P40505 327 aa6.1□□□□□ -1.43
VAM3YOR106W BAP3P41815 604 aa6.1□□□□□ -1.43
VAM3YOR106W UBC9P50623 157 aaPredicted RBP6.1□□□□□ -1.43
VAM3YOR106W UBC11P52492 156 aa6.1□□□□□ -1.43
VAM3YOR106W GND2P53319 492 aa6.1□□□□□ -1.43
VAM3YOR106W PCL2P25693 308 aa6.09□□□□□ -1.43
VAM3YOR106W MTH1P35198 433 aa6.09□□□□□ -1.43
VAM3YOR106W SPC42P36094 363 aa6.09□□□□□ -1.43
VAM3YOR106W TEL2P53038 688 aa6.09□□□□□ -1.43
VAM3YOR106W ALG12P53730 551 aa6.09□□□□□ -1.43
VAM3YOR106W IRC10Q08118 586 aa6.09□□□□□ -1.43
VAM3YOR106W MTL1P53214 551 aa6.08□□□□□ -1.44
VAM3YOR106W SSL2Q00578 843 aa6.08□□□□□ -1.44
VAM3YOR106W REC102Q02721 264 aa6.08□□□□□ -1.44
VAM3YOR106W TFB2Q02939 513 aa6.08□□□□□ -1.44
VAM3YOR106W ATG33Q06485 197 aa6.08□□□□□ -1.44
VAM3YOR106W SFL1P20134 766 aa6.07□□□□□ -1.44
VAM3YOR106W CBR1P38626 284 aaKnown RBP6.07□□□□□ -1.44
VAM3YOR106W AIM14P53109 570 aa6.07□□□□□ -1.44
VAM3YOR106W YAP1802P53309 568 aa6.07□□□□□ -1.44
VAM3YOR106W HMG1P12683 1054 aa6.06□□□□□ -1.44
VAM3YOR106W MVD1P32377 396 aaKnown RBP6.06□□□□□ -1.44
VAM3YOR106W SFP1P32432 683 aa6.06□□□□□ -1.44
VAM3YOR106W QRI1P43123 477 aaKnown RBP6.06□□□□□ -1.44
VAM3YOR106W GIN4Q12263 1142 aa6.06□□□□□ -1.44
VAM3YOR106W CDC43P18898 376 aa6.05□□□□□ -1.44
VAM3YOR106W HIR1P32479 840 aa6.05□□□□□ -1.44
VAM3YOR106W PCM1P38628 557 aaKnown RBP6.05□□□□□ -1.44
VAM3YOR106W FMO1P38866 432 aa6.05□□□□□ -1.44
VAM3YOR106W NUP60P39705 539 aa6.05□□□□□ -1.44
VAM3YOR106W MRH1Q12117 320 aaPredicted RBP6.05□□□□□ -1.44
VAM3YOR106W YKL033W-AQ86ZR7 236 aa6.05□□□□□ -1.44
VAM3YOR106W COX18P53239 316 aa6.04□□□□□ -1.44
VAM3YOR106W YNL193WP53870 558 aa6.04□□□□□ -1.44
VAM3YOR106W ARP4P80428 489 aa6.04□□□□□ -1.44
VAM3YOR106W NOP14Q99207 810 aaKnown RBP6.04□□□□□ -1.44
VAM3YOR106W HRP1Q99383 534 aaKnown RBP6.04□□□□□ -1.44
VAM3YOR106W RNR1P21524 888 aaKnown RBP6.03□□□□□ -1.44
VAM3YOR106W NMD2P38798 1089 aaKnown RBP6.03□□□□□ -1.44
VAM3YOR106W LYS9P38999 446 aa6.03□□□□□ -1.44
VAM3YOR106W PAN2P53010 1115 aaPredicted RBP6.03□□□□□ -1.44
VAM3YOR106W YLR001CQ07895 862 aa6.03□□□□□ -1.44
VAM3YOR106W SIR3P06701 978 aa6.02□□□□□ -1.45
VAM3YOR106W KIN3P22209 435 aa6.02□□□□□ -1.45
VAM3YOR106W CCR4P31384 837 aaKnown RBP6.02□□□□□ -1.45
VAM3YOR106W MNN4P36044 1178 aa6.02□□□□□ -1.45
VAM3YOR106W APN2P38207 520 aa6.02□□□□□ -1.45
VAM3YOR106W SFB3P38810 929 aa6.02□□□□□ -1.45
VAM3YOR106W MNN1P39106 762 aa6.02□□□□□ -1.45
VAM3YOR106W SET2P46995 733 aaKnown RBP6.02□□□□□ -1.45
VAM3YOR106W GIS1Q03833 894 aa6.02□□□□□ -1.45
VAM3YOR106W GUD1Q07729 489 aa6.02□□□□□ -1.45
VAM3YOR106W PYC1P11154 1178 aaKnown RBP6.01□□□□□ -1.45
VAM3YOR106W GFA1P14742 717 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms