RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W RAD18P10862 487 aa5.74□□□□□ -1.49
SSU72YNL222W LAT1P12695 482 aaKnown RBP5.74□□□□□ -1.49
SSU72YNL222W YKR051WP36142 418 aa5.74□□□□□ -1.49
SSU72YNL222W PRP31P49704 494 aaPredicted RBP5.74□□□□□ -1.49
SSU72YNL222W YBP2P53169 641 aa5.74□□□□□ -1.49
SSU72YNL222W HOG1P32485 435 aa5.73□□□□□ -1.49
SSU72YNL222W HOS4P40480 1083 aa5.73□□□□□ -1.49
SSU72YNL222W TEX1P53851 422 aaKnown RBP5.73□□□□□ -1.49
SSU72YNL222W NHX1Q04121 633 aa5.73□□□□□ -1.49
SSU72YNL222W TMN2Q04562 672 aa5.73□□□□□ -1.49
SSU72YNL222W HIS7P33734 552 aaKnown RBP5.72□□□□□ -1.49
SSU72YNL222W DAS1P47005 663 aa5.72□□□□□ -1.49
SSU72YNL222W UBC9P50623 157 aaPredicted RBP5.72□□□□□ -1.49
SSU72YNL222W TIM44Q01852 431 aa5.72□□□□□ -1.49
SSU72YNL222W GAD1Q04792 585 aa5.72□□□□□ -1.49
SSU72YNL222W RPN7Q06103 429 aaKnown RBP5.72□□□□□ -1.49
SSU72YNL222W ADE2P21264 571 aaKnown RBP5.71□□□□□ -1.5
SSU72YNL222W HSL7P38274 827 aa5.71□□□□□ -1.5
SSU72YNL222W BCD1P38772 366 aa5.71□□□□□ -1.5
SSU72YNL222W ORC4P54791 529 aa5.71□□□□□ -1.5
SSU72YNL222W PPG1P32838 368 aa5.7□□□□□ -1.5
SSU72YNL222W YHR112CP38716 378 aa5.7□□□□□ -1.5
SSU72YNL222W YHL017WP38745 532 aa5.7□□□□□ -1.5
SSU72YNL222W MIP6P38760 659 aaKnown RBP5.7□□□□□ -1.5
SSU72YNL222W ECM1P39715 212 aa5.7□□□□□ -1.5
SSU72YNL222W RNH70P53331 553 aa5.7□□□□□ -1.5
SSU72YNL222W ALG12P53730 551 aa5.7□□□□□ -1.5
SSU72YNL222W HBT1Q07653 1046 aaKnown RBP5.7□□□□□ -1.5
SSU72YNL222W ATG11Q12527 1178 aa5.7□□□□□ -1.5
SSU72YNL222W PCL2P25693 308 aa5.69□□□□□ -1.5
SSU72YNL222W DOT6P40059 670 aaKnown RBP5.69□□□□□ -1.5
SSU72YNL222W AIM14P53109 570 aa5.69□□□□□ -1.5
SSU72YNL222W GND2P53319 492 aa5.69□□□□□ -1.5
SSU72YNL222W HMG1P12683 1054 aa5.68□□□□□ -1.5
SSU72YNL222W MTH1P35198 433 aa5.68□□□□□ -1.5
SSU72YNL222W APL2P36000 726 aaPredicted RBP5.68□□□□□ -1.5
SSU72YNL222W PCL5P38794 229 aa5.68□□□□□ -1.5
SSU72YNL222W SDS3P40505 327 aa5.68□□□□□ -1.5
SSU72YNL222W MTL1P53214 551 aa5.68□□□□□ -1.5
SSU72YNL222W ARG5,6Q01217 863 aa5.68□□□□□ -1.5
SSU72YNL222W RRP14P36080 434 aaKnown RBP5.67□□□□□ -1.5
SSU72YNL222W YKR018CP36114 725 aa5.67□□□□□ -1.5
SSU72YNL222W FMP52P40008 231 aa5.67□□□□□ -1.5
SSU72YNL222W BAP3P41815 604 aa5.67□□□□□ -1.5
SSU72YNL222W UBC11P52492 156 aa5.67□□□□□ -1.5
SSU72YNL222W PCL10P53124 433 aa5.67□□□□□ -1.5
SSU72YNL222W RIA1P53893 1110 aa5.67□□□□□ -1.5
SSU72YNL222W ARP4P80428 489 aa5.67□□□□□ -1.5
SSU72YNL222W TFB2Q02939 513 aa5.67□□□□□ -1.5
SSU72YNL222W ATG33Q06485 197 aa5.67□□□□□ -1.5
SSU72YNL222W SPC42P36094 363 aa5.66□□□□□ -1.5
SSU72YNL222W APT2P36973 181 aa5.66□□□□□ -1.5
SSU72YNL222W LYS9P38999 446 aa5.66□□□□□ -1.5
SSU72YNL222W SFL1P20134 766 aa5.65□□□□□ -1.5
SSU72YNL222W ERG6P25087 383 aaKnown RBP5.65□□□□□ -1.5
SSU72YNL222W HIR1P32479 840 aa5.65□□□□□ -1.5
SSU72YNL222W TRZ1P36159 838 aaPredicted RBP5.65□□□□□ -1.5
SSU72YNL222W PCM1P38628 557 aaKnown RBP5.65□□□□□ -1.5
SSU72YNL222W FMO1P38866 432 aa5.65□□□□□ -1.5
SSU72YNL222W CCT3P39077 534 aaKnown RBP5.65□□□□□ -1.5
SSU72YNL222W TEL2P53038 688 aa5.65□□□□□ -1.5
SSU72YNL222W LEE1Q02799 301 aaKnown RBP5.65□□□□□ -1.5
SSU72YNL222W CTK1Q03957 528 aaKnown RBP5.65□□□□□ -1.5
SSU72YNL222W MCM21Q06675 368 aa5.65□□□□□ -1.5
SSU72YNL222W YLR001CQ07895 862 aa5.65□□□□□ -1.5
SSU72YNL222W IRC10Q08118 586 aa5.65□□□□□ -1.5
SSU72YNL222W SGO1Q08490 590 aa5.65□□□□□ -1.5
SSU72YNL222W HRP1Q99383 534 aaKnown RBP5.65□□□□□ -1.5
SSU72YNL222W YEL1P34225 687 aa5.64□□□□□ -1.51
SSU72YNL222W STU2P46675 888 aa5.64□□□□□ -1.51
SSU72YNL222W COG8Q04632 607 aa5.64□□□□□ -1.51
SSU72YNL222W RGC1Q06108 1083 aaKnown RBP5.64□□□□□ -1.51
SSU72YNL222W MVD1P32377 396 aaKnown RBP5.63□□□□□ -1.51
SSU72YNL222W CBR1P38626 284 aaKnown RBP5.63□□□□□ -1.51
SSU72YNL222W QRI1P43123 477 aaKnown RBP5.63□□□□□ -1.51
SSU72YNL222W ORC1P54784 914 aaPredicted RBP5.63□□□□□ -1.51
SSU72YNL222W MRH1Q12117 320 aaPredicted RBP5.63□□□□□ -1.51
SSU72YNL222W GIN4Q12263 1142 aa5.63□□□□□ -1.51
SSU72YNL222W CCR4P31384 837 aaKnown RBP5.62□□□□□ -1.51
SSU72YNL222W MNN4P36044 1178 aa5.62□□□□□ -1.51
SSU72YNL222W SFB3P38810 929 aa5.62□□□□□ -1.51
SSU72YNL222W REV7P38927 245 aa5.62□□□□□ -1.51
SSU72YNL222W NUP60P39705 539 aa5.62□□□□□ -1.51
SSU72YNL222W GET2P40056 285 aa5.62□□□□□ -1.51
SSU72YNL222W PAN2P53010 1115 aaPredicted RBP5.62□□□□□ -1.51
SSU72YNL222W MET13P53128 600 aa5.62□□□□□ -1.51
SSU72YNL222W YNL193WP53870 558 aa5.62□□□□□ -1.51
SSU72YNL222W RNR1P21524 888 aaKnown RBP5.61□□□□□ -1.51
SSU72YNL222W YPT53P36019 220 aa5.61□□□□□ -1.51
SSU72YNL222W HRB1P38922 454 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
SSU72YNL222W COX18P53239 316 aa5.61□□□□□ -1.51
SSU72YNL222W BRE5P53741 515 aaKnown RBP5.61□□□□□ -1.51
SSU72YNL222W SSL2Q00578 843 aa5.61□□□□□ -1.51
SSU72YNL222W NOP14Q99207 810 aaKnown RBP5.61□□□□□ -1.51
SSU72YNL222W SIR3P06701 978 aa5.6□□□□□ -1.51
SSU72YNL222W RPL8AP17076 256 aaKnown RBP5.6□□□□□ -1.51
SSU72YNL222W MNN1P39106 762 aa5.6□□□□□ -1.51
SSU72YNL222W YNL195CP40168 261 aa5.6□□□□□ -1.51
SSU72YNL222W GID8P40208 455 aa5.6□□□□□ -1.51
SSU72YNL222W REC102Q02721 264 aa5.6□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 142.3 ms