RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W ALG2P43636 503 aa4.42□□□□□ -1.7
PUB1YNL016W YGL176CP46945 554 aa4.42□□□□□ -1.7
PUB1YNL016W SGM1P47166 707 aa4.42□□□□□ -1.7
PUB1YNL016W VPS30Q02948 557 aa4.42□□□□□ -1.7
PUB1YNL016W RCF1Q03713 159 aa4.42□□□□□ -1.7
PUB1YNL016W COG8Q04632 607 aa4.42□□□□□ -1.7
PUB1YNL016W SPN1Q06505 410 aaPredicted RBP4.42□□□□□ -1.7
PUB1YNL016W AOS1Q06624 347 aa4.42□□□□□ -1.7
PUB1YNL016W CSR2Q12734 1121 aa4.42□□□□□ -1.7
PUB1YNL016W RAD18P10862 487 aa4.41□□□□□ -1.7
PUB1YNL016W PHO81P17442 1178 aa4.41□□□□□ -1.7
PUB1YNL016W HPR1P17629 752 aaKnown RBP4.41□□□□□ -1.7
PUB1YNL016W MSH3P25336 1018 aa4.41□□□□□ -1.7
PUB1YNL016W NAB2P32505 525 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
PUB1YNL016W STO1P34160 861 aaKnown RBP4.41□□□□□ -1.7
PUB1YNL016W SIT1P39980 628 aa4.41□□□□□ -1.7
PUB1YNL016W UTP7P40055 554 aaKnown RBP4.41□□□□□ -1.7
PUB1YNL016W QRI7P43122 407 aa4.41□□□□□ -1.7
PUB1YNL016W GUS1P46655 708 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
PUB1YNL016W MNN11P46985 422 aaKnown RBP4.41□□□□□ -1.7
PUB1YNL016W HOS2P53096 452 aaPredicted RBP4.41□□□□□ -1.7
PUB1YNL016W GTR1Q00582 310 aa4.41□□□□□ -1.7
PUB1YNL016W CIA1Q05583 330 aa4.41□□□□□ -1.7
PUB1YNL016W PSR1Q07800 427 aa4.41□□□□□ -1.7
PUB1YNL016W RMP1Q12530 201 aa4.41□□□□□ -1.7
PUB1YNL016W VPS13Q07878 3144 aa4.41□□□□□ -1.7
PUB1YNL016W DBP5P20449 482 aaKnown RBP4.4□□□□□ -1.7
PUB1YNL016W ECM32P32644 1121 aaKnown RBP4.4□□□□□ -1.7
PUB1YNL016W BEM3P32873 1128 aa4.4□□□□□ -1.7
PUB1YNL016W SPC29P33419 253 aa4.4□□□□□ -1.7
PUB1YNL016W YBR284WP38150 797 aa4.4□□□□□ -1.7
PUB1YNL016W PCM1P38628 557 aaKnown RBP4.4□□□□□ -1.7
PUB1YNL016W BCD1P38772 366 aa4.4□□□□□ -1.7
PUB1YNL016W SAH1P39954 449 aaKnown RBP4.4□□□□□ -1.7
PUB1YNL016W EMP65P40085 556 aa4.4□□□□□ -1.7
PUB1YNL016W YGR016WP53209 190 aa4.4□□□□□ -1.7
PUB1YNL016W YNR063WP53749 607 aa4.4□□□□□ -1.7
PUB1YNL016W PEX13P80667 386 aa4.4□□□□□ -1.7
PUB1YNL016W SYF1Q04048 859 aaPredicted RBP4.4□□□□□ -1.7
PUB1YNL016W TAO3P40468 2376 aa4.4□□□□□ -1.7
PUB1YNL016W SSK22P25390 1331 aaPredicted RBP4.4□□□□□ -1.71
PUB1YNL016W YER152CP10356 443 aa4.4□□□□□ -1.71
PUB1YNL016W KRR1P25586 316 aaPredicted RBP4.4□□□□□ -1.71
PUB1YNL016W SYP1P25623 870 aaKnown RBP4.4□□□□□ -1.71
PUB1YNL016W DAL3P32459 195 aa4.4□□□□□ -1.71
PUB1YNL016W VMA8P32610 256 aaKnown RBP4.4□□□□□ -1.71
PUB1YNL016W BIT2P38346 545 aa4.4□□□□□ -1.71
PUB1YNL016W PNT1P38969 423 aa4.4□□□□□ -1.71
PUB1YNL016W DOT6P40059 670 aaKnown RBP4.4□□□□□ -1.71
PUB1YNL016W SIP5P40210 489 aaKnown RBP4.4□□□□□ -1.71
PUB1YNL016W ERR3P42222 437 aa4.4□□□□□ -1.71
PUB1YNL016W SPO71Q03868 1245 aa4.4□□□□□ -1.71
PUB1YNL016W GUD1Q07729 489 aa4.4□□□□□ -1.71
PUB1YNL016W SCM3Q12334 223 aa4.4□□□□□ -1.71
PUB1YNL016W CYB2P00175 591 aa4.39□□□□□ -1.71
PUB1YNL016W RPS31P05759 152 aaKnown RBP4.39□□□□□ -1.71
PUB1YNL016W MRP7P12687 371 aa4.39□□□□□ -1.71
PUB1YNL016W VPH1P32563 840 aaKnown RBP4.39□□□□□ -1.71
PUB1YNL016W AFG2P32794 780 aa4.39□□□□□ -1.71
PUB1YNL016W SAS3P34218 831 aa4.39□□□□□ -1.71
PUB1YNL016W APE3P37302 537 aaKnown RBP4.39□□□□□ -1.71
PUB1YNL016W PSY4P38193 441 aa4.39□□□□□ -1.71
PUB1YNL016W EXO5P38289 585 aa4.39□□□□□ -1.71
PUB1YNL016W SHU2P38957 223 aa4.39□□□□□ -1.71
PUB1YNL016W CAJ1P39101 391 aa4.39□□□□□ -1.71
PUB1YNL016W YIL165CP40446 119 aa4.39□□□□□ -1.71
PUB1YNL016W MPH1P40562 993 aa4.39□□□□□ -1.71
PUB1YNL016W CAF16P43569 289 aa4.39□□□□□ -1.71
PUB1YNL016W GPI8P49018 411 aa4.39□□□□□ -1.71
PUB1YNL016W CNM67P53865 581 aaKnown RBP4.39□□□□□ -1.71
PUB1YNL016W PRP3Q03338 469 aaPredicted RBP4.39□□□□□ -1.71
PUB1YNL016W YMR018WQ04364 514 aa4.39□□□□□ -1.71
PUB1YNL016W BRE4Q07660 1125 aa4.39□□□□□ -1.71
PUB1YNL016W GAS5Q08193 484 aa4.39□□□□□ -1.71
PUB1YNL016W PEX15Q08215 383 aa4.39□□□□□ -1.71
PUB1YNL016W SPO21Q12411 609 aa4.39□□□□□ -1.71
PUB1YNL016W LYS2P07702 1392 aa4.39□□□□□ -1.71
PUB1YNL016W TY1B-AO13527 1196 aaKnown RBP4.38□□□□□ -1.71
PUB1YNL016W PHR1P05066 565 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
PUB1YNL016W COX11P19516 300 aaKnown RBP4.38□□□□□ -1.71
PUB1YNL016W RER1P25560 188 aa4.38□□□□□ -1.71
PUB1YNL016W BRF1P29056 596 aa4.38□□□□□ -1.71
PUB1YNL016W PET309P32522 965 aaPredicted RBP4.38□□□□□ -1.71
PUB1YNL016W DID4P36108 232 aa4.38□□□□□ -1.71
PUB1YNL016W DLD3P39976 496 aaKnown RBP4.38□□□□□ -1.71
PUB1YNL016W CCT5P40413 562 aaKnown RBP4.38□□□□□ -1.71
PUB1YNL016W RRT6P53117 311 aaPredicted RBP4.38□□□□□ -1.71
PUB1YNL016W CRF1Q04930 467 aa4.38□□□□□ -1.71
PUB1YNL016W GFA1P14742 717 aaKnown RBP4.37□□□□□ -1.71
PUB1YNL016W PFK1P16861 987 aaKnown RBP4.37□□□□□ -1.71
PUB1YNL016W IRE1P32361 1115 aa4.37□□□□□ -1.71
PUB1YNL016W MEP1P40260 492 aa4.37□□□□□ -1.71
PUB1YNL016W UPF3P48412 387 aaKnown RBP4.37□□□□□ -1.71
PUB1YNL016W HNT2P49775 206 aa4.37□□□□□ -1.71
PUB1YNL016W SLD3P53135 668 aa4.37□□□□□ -1.71
PUB1YNL016W ECM9Q02202 377 aa4.37□□□□□ -1.71
PUB1YNL016W SRP1Q02821 542 aaKnown RBP4.37□□□□□ -1.71
PUB1YNL016W ATP25Q03153 612 aa4.37□□□□□ -1.71
PUB1YNL016W PKH1Q03407 766 aa4.37□□□□□ -1.71
PUB1YNL016W SKY1Q03656 742 aa4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms