RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C YPL216WQ08964 1102 aa3.73□□□□□ -1.81
SHH3YMR118C HAT1Q12341 374 aa3.73□□□□□ -1.81
SHH3YMR118C FOB1O13329 566 aa3.72□□□□□ -1.81
SHH3YMR118C NUC1P08466 329 aa3.72□□□□□ -1.81
SHH3YMR118C PYC1P11154 1178 aaKnown RBP3.72□□□□□ -1.81
SHH3YMR118C CHS2P14180 963 aa3.72□□□□□ -1.81
SHH3YMR118C TUP1P16649 713 aa3.72□□□□□ -1.81
SHH3YMR118C RIT1P23796 513 aa3.72□□□□□ -1.81
SHH3YMR118C VMA3P25515 160 aa3.72□□□□□ -1.81
SHH3YMR118C ILV6P25605 309 aaKnown RBP3.72□□□□□ -1.81
SHH3YMR118C YCR051WP25631 222 aa3.72□□□□□ -1.81
SHH3YMR118C APL1P27351 700 aa3.72□□□□□ -1.81
SHH3YMR118C NAM7P30771 971 aaKnown RBP3.72□□□□□ -1.81
SHH3YMR118C SMY1P32364 656 aaKnown RBP3.72□□□□□ -1.81
SHH3YMR118C NIP1P32497 812 aaKnown RBP3.72□□□□□ -1.81
SHH3YMR118C XRS2P33301 854 aa3.72□□□□□ -1.81
SHH3YMR118C YKL091CP33324 310 aaKnown RBP3.72□□□□□ -1.81
SHH3YMR118C NIP100P33420 868 aa3.72□□□□□ -1.81
SHH3YMR118C STE13P33894 931 aa3.72□□□□□ -1.81
SHH3YMR118C TFC3P34111 1160 aa3.72□□□□□ -1.81
SHH3YMR118C SAS3P34218 831 aa3.72□□□□□ -1.81
SHH3YMR118C MCD4P36051 919 aa3.72□□□□□ -1.81
SHH3YMR118C JNM1P36224 373 aa3.72□□□□□ -1.81
SHH3YMR118C BOI1P38041 980 aaKnown RBP3.72□□□□□ -1.81
SHH3YMR118C TOS1P38288 455 aa3.72□□□□□ -1.81
SHH3YMR118C RTS1P38903 757 aa3.72□□□□□ -1.81
SHH3YMR118C STT3P39007 718 aaKnown RBP3.72□□□□□ -1.81
SHH3YMR118C TIF4631P39935 952 aaKnown RBP3.72□□□□□ -1.81
SHH3YMR118C YIL001WP40560 513 aa3.72□□□□□ -1.81
SHH3YMR118C THI6P41835 540 aa3.72□□□□□ -1.81
SHH3YMR118C KAP114P53067 1004 aa3.72□□□□□ -1.81
SHH3YMR118C HUL5P53119 910 aa3.72□□□□□ -1.81
SHH3YMR118C SDA1P53313 767 aaKnown RBP3.72□□□□□ -1.81
SHH3YMR118C YNL144CP53907 740 aa3.72□□□□□ -1.81
SHH3YMR118C SUB1P54000 292 aaKnown RBP3.72□□□□□ -1.81
SHH3YMR118C EEB1Q02891 456 aa3.72□□□□□ -1.81
SHH3YMR118C USA1Q03714 838 aa3.72□□□□□ -1.81
SHH3YMR118C MYO5Q04439 1219 aaKnown RBP3.72□□□□□ -1.81
SHH3YMR118C TAF9Q05027 157 aa3.72□□□□□ -1.81
SHH3YMR118C TOS4Q06266 489 aa3.72□□□□□ -1.81
SHH3YMR118C MAG2Q06436 670 aaKnown RBP3.72□□□□□ -1.81
SHH3YMR118C YPR078CQ06813 372 aa3.72□□□□□ -1.81
SHH3YMR118C THI3Q07471 609 aa3.72□□□□□ -1.81
SHH3YMR118C MLH2Q07980 695 aa3.72□□□□□ -1.81
SHH3YMR118C SIL1Q08199 421 aa3.72□□□□□ -1.81
SHH3YMR118C SLK19Q08581 821 aaKnown RBP3.72□□□□□ -1.81
SHH3YMR118C NCA2Q12374 616 aa3.72□□□□□ -1.81
SHH3YMR118C SEY1Q99287 776 aa3.72□□□□□ -1.81
SHH3YMR118C TUS1Q06412 1307 aa3.71□□□□□ -1.81
SHH3YMR118C ADH4P10127 382 aa3.71□□□□□ -1.82
SHH3YMR118C ERG11P10614 530 aa3.71□□□□□ -1.82
SHH3YMR118C STI1P15705 589 aaKnown RBP RIP-Chip data3.71□□□□□ -1.82not detected
SHH3YMR118C PRP9P19736 530 aaKnown RBP3.71□□□□□ -1.82
SHH3YMR118C MRPL33P20084 86 aa3.71□□□□□ -1.82
SHH3YMR118C IME1P21190 360 aa3.71□□□□□ -1.82
SHH3YMR118C PUP2P32379 260 aa3.71□□□□□ -1.82
SHH3YMR118C YME1P32795 747 aa3.71□□□□□ -1.82
SHH3YMR118C GIP1P38229 639 aa3.71□□□□□ -1.82
SHH3YMR118C YBR062CP38239 180 aa3.71□□□□□ -1.82
SHH3YMR118C SAF1P38352 637 aa3.71□□□□□ -1.82
SHH3YMR118C BSD2P38356 321 aa3.71□□□□□ -1.82
SHH3YMR118C RCK2P38623 610 aa3.71□□□□□ -1.82
SHH3YMR118C YHL050CP38721 697 aa3.71□□□□□ -1.82
SHH3YMR118C DYS1P38791 387 aa3.71□□□□□ -1.82
SHH3YMR118C LIN1P38852 340 aaPredicted RBP3.71□□□□□ -1.82
SHH3YMR118C KAP123P40069 1113 aaKnown RBP3.71□□□□□ -1.82
SHH3YMR118C VID27P40157 782 aa3.71□□□□□ -1.82
SHH3YMR118C SMX2P40204 77 aaKnown RBP3.71□□□□□ -1.82
SHH3YMR118C SAP185P40856 1058 aa3.71□□□□□ -1.82
SHH3YMR118C MMM1P41800 426 aa3.71□□□□□ -1.82
SHH3YMR118C TOS3P43637 560 aa3.71□□□□□ -1.82
SHH3YMR118C YJL181WP46987 611 aa3.71□□□□□ -1.82
SHH3YMR118C URB2P47108 1174 aa3.71□□□□□ -1.82
SHH3YMR118C TAD1P53065 400 aa3.71□□□□□ -1.82
SHH3YMR118C ERP6P53198 216 aa3.71□□□□□ -1.82
SHH3YMR118C YGR021WP53212 290 aa3.71□□□□□ -1.82
SHH3YMR118C MDR1P53258 950 aa3.71□□□□□ -1.82
SHH3YMR118C RET3P53600 189 aa3.71□□□□□ -1.82
SHH3YMR118C CPR6P53691 371 aaKnown RBP3.71□□□□□ -1.82
SHH3YMR118C DSE4P53753 1117 aa3.71□□□□□ -1.82
SHH3YMR118C BET4Q00618 327 aa3.71□□□□□ -1.82
SHH3YMR118C FOX2Q02207 900 aaKnown RBP3.71□□□□□ -1.82
SHH3YMR118C MFM1Q02783 413 aa3.71□□□□□ -1.82
SHH3YMR118C DIG1Q03063 452 aaKnown RBP3.71□□□□□ -1.82
SHH3YMR118C GIR2Q03768 265 aaPredicted RBP3.71□□□□□ -1.82
SHH3YMR118C FAR8Q05040 523 aa3.71□□□□□ -1.82
SHH3YMR118C ABP140Q08641 628 aaKnown RBP3.71□□□□□ -1.82
SHH3YMR118C GNT1Q12096 491 aa3.71□□□□□ -1.82
SHH3YMR118C TY1A-NL1Q12391 440 aaKnown RBP3.71□□□□□ -1.82
SHH3YMR118C COBP00163 385 aa3.7□□□□□ -1.82
SHH3YMR118C POL3P15436 1097 aa3.7□□□□□ -1.82
SHH3YMR118C SRV2P17555 526 aaKnown RBP3.7□□□□□ -1.82
SHH3YMR118C MGM1P32266 881 aa3.7□□□□□ -1.82
SHH3YMR118C MVD1P32377 396 aaKnown RBP3.7□□□□□ -1.82
SHH3YMR118C SUV3P32580 737 aa3.7□□□□□ -1.82
SHH3YMR118C PUB1P32588 453 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
SHH3YMR118C SSE1P32589 693 aaKnown RBP3.7□□□□□ -1.82
SHH3YMR118C SMC1P32908 1225 aa3.7□□□□□ -1.82
SHH3YMR118C PRP40P33203 583 aaKnown RBP3.7□□□□□ -1.82
SHH3YMR118C PTK1P36002 662 aaPredicted RBP3.7□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms